RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CCZ1BP86790 482 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CCZ1P86791 482 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 UBE3CQ15386 1083 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CCDC96Q2M329 555 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 GIGYF2Q6Y7W6 1299 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CNGA4Q8IV77 575 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 MB21D2Q8IYB1 491 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CEP112Q8N8E3 955 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 AATFQ9NY61 560 aaKnown RBP eCLIP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 LUC7L2Q9Y383 392 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 CYP2D7A0A087X1C5 515 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 IKBKBO14920 756 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 PPARAQ07869 468 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 E4F1Q66K89 784 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 TTLL11Q8NHH1 800 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 MMRN2Q9H8L6 949 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 SENP2Q9HC62 589 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 DDX41Q9UJV9 622 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 MAN1B1Q9UKM7 699 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 PXDNLA1KZ92 1463 aa7.77□□□□□ -1.17
SYNPO2-206ENST00000610556 VIRMAQ69YN4 1812 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 MACROD2A1Z1Q3 448 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 UBE2Q2LH0YL09 131 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 MYO1BO43795 1136 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 TSPY3P0CV98 308 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 TSPY8P0CW00 308 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 SMC1AQ14683 1233 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 CCDC122Q5T0U0 273 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 CTR9Q6PD62 1173 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 SHC4Q6S5L8 630 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 NLRP10Q86W26 655 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 LCORLQ8N3X6 602 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 EPSTI1Q96J88 318 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 EXOC1Q9NV70 894 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 RMND1Q9NWS8 449 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 TMEM94Q12767 1356 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 RTL9Q8NET4 1388 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 MAP3K15Q6ZN16 1313 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 PPP6R2O75170 966 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 ZPR1O75312 459 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 DTHD1Q6ZMT9 781 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 UIMC1Q96RL1 719 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 PSMB7Q99436 277 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 BMP2KQ9NSY1 1161 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 RSPH14Q9UHP6 348 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 NEDD4P46934 1319 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 SOWAHDA6NJG2 315 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 POTEB2H3BUK9 544 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 MPHOSPH10O00566 681 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 ZSCAN20P17040 1043 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 ARID5AQ03989 594 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 MAP9Q49MG5 647 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 DNAJC21Q5F1R6 531 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 NBPF5PQ86XG9 351 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 TXLNBQ8N3L3 684 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 ENGASEQ8NFI3 743 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 SYMPKQ92797 1274 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 STRBPQ96SI9 672 aaKnown RBP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 TSPYL1Q9H0U9 437 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 UTYO14607 1347 aa7.76□□□□□ -1.17
SYNPO2-206ENST00000610556 USO1O60763 962 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 NAPAP54920 295 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PTGDRQ13258 359 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 RASGRF1Q13972 1273 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 LETM2Q2VYF4 491 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 VSTM4Q8IW00 320 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PIGBQ92521 554 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 OSBPL5Q9H0X9 879 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 RABEP2Q9H5N1 569 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 NCAPD2Q15021 1401 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 CASP14P31944 242 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 GUCY1A2P33402 732 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 ANTXR2P58335 489 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 TBC1D8BQ0IIM8 1120 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PAK1Q13153 545 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 C10orf67Q8IYJ2 551 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 OXER1Q8TDS5 423 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 NELFBQ8WX92 580 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 ANKRD7Q92527 254 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 NAPGQ99747 312 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 UBA5Q9GZZ9 404 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 EFCAB8A8MWE9 144 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 MMP1P03956 469 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PRR29P0C7W0 189 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 CYLC1P35663 651 aaPredicted RBP7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PAFAH1B1P43034 410 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PIP4K2BP78356 416 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 PPARDQ03181 441 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 DDB1Q16531 1140 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 UTP14CQ5TAP6 766 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 WWC2Q6AWC2 1192 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 IQCEQ6IPM2 695 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 CALML4Q96GE6 196 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 CCDC42Q96M95 316 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 CEP89Q96ST8 783 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 ZCCHC17Q9NP64 241 aaKnown RBP7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 ATG3Q9NT62 314 aa7.75□□□□□ -1.17
SYNPO2-206ENST00000610556 SAP30BPQ9UHR5 308 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms