RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CERKLQ49MI3 558 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-219ENST00000580540 TREML2Q5T2D2 321 aa20.03■□□□□ 0.8
SREBF1-219ENST00000580540 C17orf99Q6UX52 265 aa20.03■□□□□ 0.8
SREBF1-219ENST00000580540 ARHGAP39Q9C0H5 1083 aa20.03■□□□□ 0.8
SREBF1-219ENST00000580540 PUS7LQ9H0K6 701 aaKnown RBP20.03■□□□□ 0.8
SREBF1-219ENST00000580540 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-219ENST00000580540 SLC4A4Q9Y6R1 1079 aa20.03■□□□□ 0.8
SREBF1-219ENST00000580540 PHIPQ8WWQ0 1821 aa20.03■□□□□ 0.8
SREBF1-219ENST00000580540 GLRX3O76003 335 aaKnown RBP20.02■□□□□ 0.8
SREBF1-219ENST00000580540 SOX10P56693 466 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 EVX2Q03828 476 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 MTMR2Q13614 643 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 SMCR8Q8TEV9 937 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-219ENST00000580540 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 WDR18Q9BV38 432 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 GINM1Q9NU53 330 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.8
SREBF1-219ENST00000580540 NAV1Q8NEY1 1877 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 RNF113AO15541 343 aaKnown RBP20.01■□□□□ 0.79
SREBF1-219ENST00000580540 LACTBP83111 547 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-219ENST00000580540 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 ABCB5Q2M3G0 1257 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 B4GALNT3Q6L9W6 998 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 TATDN1Q6P1N9 297 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 AMOTL1Q8IY63 956 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 PROCA1Q8NCQ7 364 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-219ENST00000580540 PI4K2BQ8TCG2 481 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 CABP5Q9NP86 173 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 ATP8A2Q9NTI2 1148 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 TMOD4Q9NZQ9 345 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 MYH7P12883 1935 aa20.01■□□□□ 0.79
SREBF1-219ENST00000580540 SHMT1P34896 483 aa20■□□□□ 0.79
SREBF1-219ENST00000580540 BACE1P56817 501 aa20■□□□□ 0.79
SREBF1-219ENST00000580540 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
SREBF1-219ENST00000580540 FSD1Q9BTV5 496 aa20■□□□□ 0.79
SREBF1-219ENST00000580540 SLC45A1Q9Y2W3 748 aa20■□□□□ 0.79
SREBF1-219ENST00000580540 PTPRFP10586 1907 aa20■□□□□ 0.79
SREBF1-219ENST00000580540 ADGRA2Q96PE1 1338 aa20■□□□□ 0.79
SREBF1-219ENST00000580540 CYP2D7A0A087X1C5 515 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 USP17L10C9JJH3 530 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 MPHOSPH10O00566 681 aaKnown RBP19.99■□□□□ 0.79
SREBF1-219ENST00000580540 FMNL1O95466 1100 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-219ENST00000580540 ZFYP08048 801 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-219ENST00000580540 PSMC4P43686 418 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 PABPC4Q13310 644 aaKnown RBP eCLIP19.99■□□□□ 0.79
SREBF1-219ENST00000580540 LRRFIP1Q32MZ4 808 aaKnown RBP19.99■□□□□ 0.79
SREBF1-219ENST00000580540 APPBP2Q92624 585 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 DYNLL2Q96FJ2 89 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 FEZ1Q99689 392 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 LNPKQ9C0E8 428 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
SREBF1-219ENST00000580540 USP17L12C9JPN9 530 aa19.98■□□□□ 0.79
SREBF1-219ENST00000580540 USP17L21D6R901 530 aa19.98■□□□□ 0.79
SREBF1-219ENST00000580540 OSBPP22059 807 aa19.98■□□□□ 0.79
SREBF1-219ENST00000580540 SH3D19Q5HYK7 790 aa19.98■□□□□ 0.79
SREBF1-219ENST00000580540 SLC44A5Q8NCS7 719 aa19.98■□□□□ 0.79
SREBF1-219ENST00000580540 OSBP2Q969R2 916 aa19.98■□□□□ 0.79
SREBF1-219ENST00000580540 STRBPQ96SI9 672 aaKnown RBP19.98■□□□□ 0.79
SREBF1-219ENST00000580540 C19orf81C9J6K1 198 aa19.97■□□□□ 0.79
SREBF1-219ENST00000580540 IGHDP01880 384 aa19.97■□□□□ 0.79
SREBF1-219ENST00000580540 BCRP11274 1271 aa19.97■□□□□ 0.79
SREBF1-219ENST00000580540 GABPAQ06546 454 aa19.97■□□□□ 0.79
SREBF1-219ENST00000580540 ZYXQ15942 572 aaKnown RBP19.97■□□□□ 0.79
SREBF1-219ENST00000580540 PTCH2Q9Y6C5 1203 aa19.97■□□□□ 0.79
SREBF1-219ENST00000580540 SMIM22K7EJ46 135 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 CTGFP29279 349 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 IRX3P78415 501 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-219ENST00000580540 C12orf60Q5U649 245 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 USP17L2Q6R6M4 530 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 ANKRD13CQ8N6S4 541 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 TRIM47Q96LD4 638 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 ASCC2Q9H1I8 757 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-219ENST00000580540 SWAP70Q9UH65 585 aa19.96■□□□□ 0.79
SREBF1-219ENST00000580540 BAZ2AQ9UIF9 1905 aaKnown RBP19.96■□□□□ 0.79
SREBF1-219ENST00000580540 ZSWIM8A7E2V4 1837 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 M0R2C6 588 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 GPAA1O43292 621 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 APPP05067 770 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 HOXD10P28358 340 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 PDE1AP54750 535 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 SEPT2Q15019 361 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 CTR9Q6PD62 1173 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 SMC5Q8IY18 1101 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 STK11IPQ8N1F8 1099 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 DDX60LQ5H9U9 1706 aaKnown RBP19.95■□□□□ 0.78
SREBF1-219ENST00000580540 SALL3Q9BXA9 1300 aa19.95■□□□□ 0.78
SREBF1-219ENST00000580540 GNRH1P01148 92 aa19.94■□□□□ 0.78
SREBF1-219ENST00000580540 FCGRTP55899 365 aa19.94■□□□□ 0.78
SREBF1-219ENST00000580540 ACER1Q8TDN7 264 aa19.94■□□□□ 0.78
SREBF1-219ENST00000580540 SEC62Q99442 399 aaKnown RBP19.94■□□□□ 0.78
SREBF1-219ENST00000580540 EMILIN3Q9NT22 766 aa19.94■□□□□ 0.78
SREBF1-219ENST00000580540 STAP2Q9UGK3 403 aa19.94■□□□□ 0.78
SREBF1-219ENST00000580540 GSG1L2A8MUP6 293 aa19.93■□□□□ 0.78
SREBF1-219ENST00000580540 MINDY4BA8MYZ0 360 aa19.93■□□□□ 0.78
SREBF1-219ENST00000580540 GUCY1A2P33402 732 aa19.93■□□□□ 0.78
SREBF1-219ENST00000580540 CDK8P49336 464 aa19.93■□□□□ 0.78
SREBF1-219ENST00000580540 SLC9C1Q4G0N8 1177 aa19.93■□□□□ 0.78
SREBF1-219ENST00000580540 MYCP01106 439 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-219ENST00000580540 AKR1B1P15121 316 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms