RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 TMEM39AQ9NV64 488 aa10.11□□□□□ -0.79
PPP4R1-211ENST00000578875 A0A1B0GUL6 1792 aa10.11□□□□□ -0.79
PPP4R1-211ENST00000578875 PRRC2BQ5JSZ5 2229 aaKnown RBP10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 XIRP2A4UGR9 3374 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 KBTBD13C9JR72 458 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 PQBP1O60828 265 aaKnown RBP10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 MAPK4P31152 587 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 RABGGTBP53611 331 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 HERVK_113P62684 666 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 ERVK-9P63128 1117 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 ERVK-24P63145 666 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 ATP2B2Q01814 1243 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 FAAP100Q0VG06 881 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 LRRC41Q15345 812 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 CCDC57Q2TAC2 916 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 TAF7LQ5H9L4 462 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 C1orf53Q5VUE5 145 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 ZNF365Q70YC5 407 aa10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 CCAR1Q8IX12 1150 aaKnown RBP10.1□□□□□ -0.79
PPP4R1-211ENST00000578875 UTYO14607 1347 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 MSCO60682 206 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 IGHA2P01877 340 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 CYBAP13498 195 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 PRDX5P30044 214 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 IRX3P78415 501 aaPredicted RBP10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 JAG1P78504 1218 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 SH3D19Q5HYK7 790 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 CCDC30Q5VVM6 783 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 HERVK_113Q902F9 699 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 CERS4Q9HA82 394 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 SLC28A3Q9HAS3 691 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 MSRAQ9UJ68 235 aa10.09□□□□□ -0.79
PPP4R1-211ENST00000578875 CNMDO75829 334 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 CSF2RAP15509 400 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 PICALMQ13492 652 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 LRRC24Q50LG9 513 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 WDR78Q5VTH9 848 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 SLC44A5Q8NCS7 719 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 CHD7Q9P2D1 2997 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 SUGT1Q9Y2Z0 365 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 MTCH2Q9Y6C9 303 aa10.08□□□□□ -0.8
PPP4R1-211ENST00000578875 MAST3O60307 1309 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 EPOPA6NHQ4 379 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 ENTPD3O75355 529 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 TIMP1P01033 207 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 PTPREP23469 700 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 HOXA7P31268 230 aaPredicted RBP10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 MTMR2Q13614 643 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 FAM47AQ5JRC9 791 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 IDI2Q9BXS1 227 aa10.07□□□□□ -0.8
PPP4R1-211ENST00000578875 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.07□□□□□ -0.86e-7■■■□□ 18.3
PPP4R1-211ENST00000578875 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 ST18O60284 1047 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 SLC4A2P04920 1241 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 MFSD5Q6N075 450 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 LINS1Q8NG48 757 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 CWC22Q9HCG8 908 aaKnown RBP10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 PHF24Q9UPV7 400 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 WDFY4Q6ZS81 3184 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 CACNA1GO43497 2377 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 ZDBF2Q9HCK1 2354 aa10.06□□□□□ -0.8
PPP4R1-211ENST00000578875 SLC15A5A6NIM6 579 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 KRT37O76014 449 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 PGK1P00558 417 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 HOXC6P09630 235 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 CAP2P40123 477 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 BACE1P56817 501 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 RAB30Q15771 203 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 GJD3Q8N144 294 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 HLA-CQ95604 372 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
PPP4R1-211ENST00000578875 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 F6X3S4 739 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 SEPT4O43236 478 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 ZEB1P37275 1124 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 CSPP1Q1MSJ5 1256 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 NCBP3Q53F19 620 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 VGLL2Q8N8G2 317 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 WDR66Q8TBY9 1149 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 TMOD4Q9NZQ9 345 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 BTBD7Q9P203 1132 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 TBX21Q9UL17 535 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 COG5Q9UP83 839 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 MYBBP1AQ9BQG0 1328 aaKnown RBP10.04□□□□□ -0.8
PPP4R1-211ENST00000578875 A0A1W2PQ45 241 aaPredicted RBP10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 A0A1W2PQY0 241 aa10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 TBC1D12O60347 775 aa10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 COBLO75128 1261 aa10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 PDE8BO95263 885 aa10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 LDHBP07195 334 aaKnown RBP10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 POU3F3P20264 500 aaPredicted RBP10.03□□□□□ -0.8
PPP4R1-211ENST00000578875 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms