RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CCDC144BQ3MJ40 725 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 PPP1R13BQ96KQ4 1090 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 EBAG9O00559 213 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 TTC14Q96N46 770 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 ENC1O14682 589 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-206ENST00000578373 VAV2P52735 878 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 CTSWP56202 376 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 CYP26C1Q6V0L0 522 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 FCHSD1Q86WN1 690 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 CYP2D7A0A087X1C5 515 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 ZMYND10O75800 440 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 CASP1P29466 404 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 GNA11P29992 359 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 SLC39A14Q15043 492 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 BICDL2A1A5D9 508 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 CCDC25Q86WR0 208 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 GIMAP7Q8NHV1 300 aa13.51□□□□□ -0.25
ERBB2-206ENST00000578373 SAMSN1Q9NSI8 373 aaKnown RBP13.51□□□□□ -0.25
ERBB2-206ENST00000578373 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-206ENST00000578373 PARP1P09874 1014 aaKnown RBP13.5□□□□□ -0.25
ERBB2-206ENST00000578373 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-206ENST00000578373 PTGDRQ13258 359 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 INF2Q27J81 1249 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 PAIP2Q9BPZ3 127 aaKnown RBP13.5□□□□□ -0.25
ERBB2-206ENST00000578373 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-206ENST00000578373 SP4Q02446 784 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 CETN1Q12798 172 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 CFAP58Q5T655 872 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 TGFBRAP1Q8WUH2 860 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 CSRNP2Q9H175 543 aa13.5□□□□□ -0.25
ERBB2-206ENST00000578373 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
ERBB2-206ENST00000578373 IVLP07476 585 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 MAGEA1P43355 309 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 GSTO1P78417 241 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 GABPB1Q06547 395 aaPredicted RBP13.49□□□□□ -0.25
ERBB2-206ENST00000578373 SND1Q7KZF4 910 aaKnown RBP eCLIP13.49□□□□□ -0.255e-6■□□□□ 9.7
ERBB2-206ENST00000578373 TMTC1Q8IUR5 882 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 ZC3H12CQ9C0D7 883 aaKnown RBP13.49□□□□□ -0.25
ERBB2-206ENST00000578373 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
ERBB2-206ENST00000578373 DENND2AQ9ULE3 1009 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 ZBTB1Q9Y2K1 713 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 CHMP2AO43633 222 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 CASP14P31944 242 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 TNIP1Q15025 636 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 EPC1Q9H2F5 836 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 PDE8BO95263 885 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 MAEAQ7L5Y9 396 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 KLHL7Q8IXQ5 586 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 FAM76AQ8TAV0 307 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 ZMYM6O95789 1325 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 PREX2Q70Z35 1606 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 RBM6P78332 1123 aaKnown RBP13.49□□□□□ -0.25
ERBB2-206ENST00000578373 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
ERBB2-206ENST00000578373 SYMPKQ92797 1274 aaKnown RBP13.49□□□□□ -0.25
ERBB2-206ENST00000578373 CEP57Q86XR8 500 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 GOLPH3LQ9H4A5 285 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 LRWD1Q9UFC0 647 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 ATP7BP35670 1465 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 HERC4Q5GLZ8 1057 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-206ENST00000578373 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-206ENST00000578373 ZSWIM5Q9P217 1185 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 RRAGAQ7L523 313 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 SELENOSQ9BQE4 189 aa13.48□□□□□ -0.25
ERBB2-206ENST00000578373 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-206ENST00000578373 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
ERBB2-206ENST00000578373 OPA1O60313 960 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 CTNNA2P26232 953 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 FBXO38Q6PIJ6 1188 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 OTUD6BQ8N6M0 293 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 PLCD1P51178 756 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 GYS2P54840 703 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 MICALCLQ6ZW33 695 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 ZNF804AQ7Z570 1209 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 A0A1W2PQ27 194 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 A0A1W2PQ64 194 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 UFL1O94874 794 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
ERBB2-206ENST00000578373 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
ERBB2-206ENST00000578373 EPSTI1Q96J88 318 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
ERBB2-206ENST00000578373 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms