RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 USP5P45974 858 aa16.3■□□□□ 0.2
NUP188-211ENST00000550219 FAM110CQ1W6H9 321 aa16.3■□□□□ 0.2
NUP188-211ENST00000550219 COA7Q96BR5 231 aa16.3■□□□□ 0.2
NUP188-211ENST00000550219 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
NUP188-211ENST00000550219 BRCA2P51587 3418 aa16.3■□□□□ 0.2
NUP188-211ENST00000550219 HMMRO75330 724 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 INHAP05111 366 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 ASNSP08243 561 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
NUP188-211ENST00000550219 JAG1P78504 1218 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 NKX2-3Q8TAU0 364 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 UNC93B1Q9H1C4 597 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 ASCC2Q9H1I8 757 aaPredicted RBP16.29■□□□□ 0.2
NUP188-211ENST00000550219 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 TMOD4Q9NZQ9 345 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
NUP188-211ENST00000550219 GJB1P08034 283 aa16.28■□□□□ 0.2
NUP188-211ENST00000550219 MAP3K12Q12852 859 aa16.28■□□□□ 0.2
NUP188-211ENST00000550219 SH3D19Q5HYK7 790 aa16.28■□□□□ 0.2
NUP188-211ENST00000550219 IGHDP01880 384 aa16.27■□□□□ 0.2
NUP188-211ENST00000550219 GJA8P48165 433 aa16.27■□□□□ 0.2
NUP188-211ENST00000550219 GCLCP48506 637 aaPredicted RBP16.27■□□□□ 0.2
NUP188-211ENST00000550219 HSP90AB4PQ58FF6 505 aa16.27■□□□□ 0.2
NUP188-211ENST00000550219 HABP4Q5JVS0 413 aaKnown RBP16.27■□□□□ 0.2
NUP188-211ENST00000550219 FOXP4Q8IVH2 680 aaPredicted RBP16.27■□□□□ 0.2
NUP188-211ENST00000550219 RHPN1Q8TCX5 695 aa16.27■□□□□ 0.2
NUP188-211ENST00000550219 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.2
NUP188-211ENST00000550219 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
NUP188-211ENST00000550219 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
NUP188-211ENST00000550219 DCTPP1Q9H773 170 aa16.27■□□□□ 0.2
NUP188-211ENST00000550219 NAV1Q8NEY1 1877 aa16.27■□□□□ 0.19
NUP188-211ENST00000550219 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.19
NUP188-211ENST00000550219 MYH1P12882 1939 aa16.26■□□□□ 0.19
NUP188-211ENST00000550219 BACE1P56817 501 aa16.26■□□□□ 0.19
NUP188-211ENST00000550219 IRF5Q13568 498 aa16.26■□□□□ 0.19
NUP188-211ENST00000550219 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
NUP188-211ENST00000550219 DPF3Q92784 378 aa16.26■□□□□ 0.19
NUP188-211ENST00000550219 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
NUP188-211ENST00000550219 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
NUP188-211ENST00000550219 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 H0YGN5 161 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 PEX10O60683 326 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 IGSF3O75054 1194 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 FARP2O94887 1054 aaPredicted RBP16.25■□□□□ 0.19
NUP188-211ENST00000550219 GH2P01242 217 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
NUP188-211ENST00000550219 DEFB118Q96PH6 123 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 FEZ1Q99689 392 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 GTF3C3Q9Y5Q9 886 aa16.25■□□□□ 0.19
NUP188-211ENST00000550219 IFIT2P09913 472 aaKnown RBP16.24■□□□□ 0.19
NUP188-211ENST00000550219 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
NUP188-211ENST00000550219 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
NUP188-211ENST00000550219 PXYLP1Q8TE99 480 aa16.24■□□□□ 0.19
NUP188-211ENST00000550219 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
NUP188-211ENST00000550219 PAGR1Q9BTK6 254 aa16.24■□□□□ 0.19
NUP188-211ENST00000550219 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 C19orf81C9J6K1 198 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 GOLIM4O00461 696 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 HERVK_113P62684 666 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
NUP188-211ENST00000550219 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
NUP188-211ENST00000550219 HTATIP2Q9BUP3 242 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 GINM1Q9NU53 330 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
NUP188-211ENST00000550219 COLQQ9Y215 455 aaPredicted RBP16.23■□□□□ 0.19
NUP188-211ENST00000550219 SGPL1O95470 568 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
NUP188-211ENST00000550219 HMGCRP04035 888 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
NUP188-211ENST00000550219 PDE6AP16499 860 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 SLC9C2Q5TAH2 1124 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 USP17L2Q6R6M4 530 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 TTC6Q86TZ1 520 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
NUP188-211ENST00000550219 CCDC136Q96JN2 1154 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 RIOK1Q9BRS2 568 aaKnown RBP16.22■□□□□ 0.19
NUP188-211ENST00000550219 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.22■□□□□ 0.19
NUP188-211ENST00000550219 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 MORF4L1Q9UBU8 362 aa16.22■□□□□ 0.19
NUP188-211ENST00000550219 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 CYP2B6P20813 491 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.19
NUP188-211ENST00000550219 TRIM32Q13049 653 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 UBE2Q1Q7Z7E8 422 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
NUP188-211ENST00000550219 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
NUP188-211ENST00000550219 EHD4Q9H223 541 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
NUP188-211ENST00000550219 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.19
NUP188-211ENST00000550219 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 PLCD1P51178 756 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms