RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 TEX11Q8IYF3 940 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 CRACR2BQ8N4Y2 399 aaPredicted RBP8.99□□□□□ -0.97
ERBB3-206ENST00000548709 SPATA5Q8NB90 893 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 SSH1Q8WYL5 1049 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 LPAR1Q92633 364 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 NSUN4Q96CB9 384 aaKnown RBP8.99□□□□□ -0.97
ERBB3-206ENST00000548709 XAGE2Q96GT9 111 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 API5Q9BZZ5 524 aaKnown RBP8.99□□□□□ -0.97
ERBB3-206ENST00000548709 SLC5A4Q9NY91 659 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 RAI14Q9P0K7 980 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 LRP2BPQ9P2M1 347 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 IVNS1ABPQ9Y6Y0 642 aa8.99□□□□□ -0.97
ERBB3-206ENST00000548709 COL2A1P02458 1487 aaPredicted RBP8.99□□□□□ -0.97
ERBB3-206ENST00000548709 TMEM265A0A087WTH1 108 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L15C9J2P7 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L13C9JLJ4 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L11C9JVI0 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L18D6R9N7 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L22D6RA61 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L17D6RBQ6 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L19D6RCP7 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L20D6RJB6 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 DNM1LO00429 736 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 STRNO43815 780 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 HLA-DOAP06340 250 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 GNAI3P08754 354 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 HOXC6P09630 235 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 ADORA1P30542 326 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 PPP4CP60510 307 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 SMAD3P84022 425 aaKnown RBP8.98□□□□□ -0.97
ERBB3-206ENST00000548709 USP17L24Q0WX57 530 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 TMED8Q6PL24 325 aaPredicted RBP8.98□□□□□ -0.97
ERBB3-206ENST00000548709 NEUROD6Q96NK8 337 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 GUCD1Q96NT3 240 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 PRDM6Q9NQX0 595 aa8.98□□□□□ -0.97
ERBB3-206ENST00000548709 DDX20Q9UHI6 824 aaKnown RBP8.98□□□□□ -0.97
ERBB3-206ENST00000548709 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 CCND3P30281 292 aaPredicted RBP8.97□□□□□ -0.97
ERBB3-206ENST00000548709 Q3C1V9 767 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 NAA16Q6N069 864 aaPredicted RBP8.97□□□□□ -0.97
ERBB3-206ENST00000548709 LBX2Q6XYB7 198 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 MAFAQ8NHW3 353 aaPredicted RBP8.97□□□□□ -0.97
ERBB3-206ENST00000548709 CDX2Q99626 313 aaPredicted RBP8.97□□□□□ -0.97
ERBB3-206ENST00000548709 PAGR1Q9BTK6 254 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 TXNRD2Q9NNW7 524 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 HMG20BQ9P0W2 317 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.97□□□□□ -0.97
ERBB3-206ENST00000548709 CACNA1FO60840 1977 aa8.97□□□□□ -0.97
ERBB3-206ENST00000548709 KBTBD13C9JR72 458 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 SLURP2P0DP57 97 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 PTPREP23469 700 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.98
ERBB3-206ENST00000548709 CNGA1P29973 690 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 TFCP2Q12800 502 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 G3BP1Q13283 466 aaKnown RBP eCLIP8.96□□□□□ -0.987e-7■□□□□ 10.9
ERBB3-206ENST00000548709 MTX1Q13505 466 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 CCDC158Q5M9N0 1113 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 FAM9BQ8IZU0 186 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 C12orf42Q96LP6 360 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 PORCNQ9H237 461 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 HOXC10Q9NYD6 342 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 PA2G4Q9UQ80 394 aaKnown RBP8.96□□□□□ -0.98
ERBB3-206ENST00000548709 ZNF521Q96K83 1311 aa8.96□□□□□ -0.98
ERBB3-206ENST00000548709 SRGAP3O43295 1099 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 RTP1P59025 263 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 RRP1BQ14684 758 aaKnown RBP8.95□□□□□ -0.98
ERBB3-206ENST00000548709 CCL14Q16627 93 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 OLFML2BQ68BL8 750 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 SLC39A5Q6ZMH5 540 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 DPP9Q86TI2 863 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 ZNF384Q8TF68 577 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 TGFBRAP1Q8WUH2 860 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 ARHGAP45Q92619 1136 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 FAM161BQ96MY7 647 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 FEZ1Q99689 392 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 KIAA1683Q9H0B3 1180 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 CABP5Q9NP86 173 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 ZBTB21Q9ULJ3 1066 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 TACC3Q9Y6A5 838 aa8.95□□□□□ -0.98
ERBB3-206ENST00000548709 ATN1P54259 1190 aaPredicted RBP8.94□□□□□ -0.98
ERBB3-206ENST00000548709 SLFN5Q08AF3 891 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 GRB14Q14449 540 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 SHHQ15465 462 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 TTC6Q86TZ1 520 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 MB21D1Q8N884 522 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 SH3RF3Q8TEJ3 882 aaPredicted RBP8.94□□□□□ -0.98
ERBB3-206ENST00000548709 GPR108Q9NPR9 543 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 AATFQ9NY61 560 aaKnown RBP eCLIP8.94□□□□□ -0.98
ERBB3-206ENST00000548709 NRBP1Q9UHY1 535 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 ATP11BQ9Y2G3 1177 aa8.94□□□□□ -0.98
ERBB3-206ENST00000548709 IPO8O15397 1037 aaKnown RBP8.93□□□□□ -0.98
ERBB3-206ENST00000548709 SEPT4O43236 478 aa8.93□□□□□ -0.98
ERBB3-206ENST00000548709 GH2P01242 217 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms