RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 UQCRHP07919 91 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 RFC4P35249 363 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 AKAP17AQ02040 695 aaKnown RBP20.63■□□□□ 0.89
GNE-204ENST00000539208 TROAPQ12815 778 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 CMTR1Q8N1G2 835 aaKnown RBP20.63■□□□□ 0.89
GNE-204ENST00000539208 CCDC82Q8N4S0 544 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 CLIC6Q96NY7 704 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 ARPP21Q9UBL0 812 aaPredicted RBP20.63■□□□□ 0.89
GNE-204ENST00000539208 SMTNL1A8MU46 457 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 PTPREP23469 700 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 PRDX5P30044 214 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 CCDC144BQ3MJ40 725 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 ZNF579Q8NAF0 562 aaKnown RBP20.63■□□□□ 0.89
GNE-204ENST00000539208 TNRC6CQ9HCJ0 1690 aaKnown RBP20.63■□□□□ 0.89
GNE-204ENST00000539208 AATFQ9NY61 560 aaKnown RBP eCLIP20.63■□□□□ 0.89
GNE-204ENST00000539208 KCNH3Q9ULD8 1083 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 LEMD3Q9Y2U8 911 aa20.63■□□□□ 0.89
GNE-204ENST00000539208 IKBKBO14920 756 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 PKN1Q16512 942 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 CCDC24Q8N4L8 307 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 TAOK2Q9UL54 1235 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 CEP131Q9UPN4 1083 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 DYNC1I1O14576 645 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 CHAF1AQ13111 956 aaPredicted RBP20.62■□□□□ 0.89
GNE-204ENST00000539208 GRAPQ13588 217 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 KRBA2Q6ZNG9 492 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 TXNRD3Q86VQ6 643 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 GRAPLQ8TC17 118 aaPredicted RBP20.62■□□□□ 0.89
GNE-204ENST00000539208 CACTINQ8WUQ7 758 aaKnown RBP20.62■□□□□ 0.89
GNE-204ENST00000539208 FBXO2Q9UK22 296 aaPredicted RBP20.62■□□□□ 0.89
GNE-204ENST00000539208 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
GNE-204ENST00000539208 MYH6P13533 1939 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 TPM4P67936 248 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 LRMPQ12912 555 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 MYRIPQ8NFW9 859 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 NOL10Q9BSC4 688 aaKnown RBP20.61■□□□□ 0.89
GNE-204ENST00000539208 PHF20Q9BVI0 1012 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 PRDM1O75626 825 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 NR5A1Q13285 461 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 LRRC8AQ8IWT6 810 aa20.61■□□□□ 0.89
GNE-204ENST00000539208 BIN1O00499 593 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 ADRA2BP18089 450 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 NCAPHQ15003 741 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 LONRF3Q496Y0 759 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 FAM182BQ5T319 152 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 C15orf52Q6ZUT6 534 aaKnown RBP20.6■□□□□ 0.89
GNE-204ENST00000539208 WDR66Q8TBY9 1149 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 GJD4Q96KN9 370 aaPredicted RBP20.6■□□□□ 0.89
GNE-204ENST00000539208 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
GNE-204ENST00000539208 SRPRBQ9Y5M8 271 aaKnown RBP20.6■□□□□ 0.89
GNE-204ENST00000539208 ONECUT3O60422 494 aaPredicted RBP20.59■□□□□ 0.89
GNE-204ENST00000539208 PDE4BQ07343 736 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 NFIXQ14938 502 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 TMTC3Q6ZXV5 915 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 METTL16Q86W50 562 aaKnown RBP20.59■□□□□ 0.89
GNE-204ENST00000539208 OXER1Q8TDS5 423 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 IMPACTQ9P2X3 320 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 HOOK1Q9UJC3 728 aaKnown RBP20.59■□□□□ 0.89
GNE-204ENST00000539208 NPHP1O15259 732 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 CNNM3Q8NE01 707 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 SHISA4Q96DD7 197 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 PCDHB6Q9Y5E3 794 aa20.59■□□□□ 0.89
GNE-204ENST00000539208 MDM2Q00987 491 aaPredicted RBP20.58■□□□□ 0.89
GNE-204ENST00000539208 DZIP1Q86YF9 867 aaKnown RBP20.58■□□□□ 0.89
GNE-204ENST00000539208 V9GY48 417 aaPredicted RBP20.58■□□□□ 0.89
GNE-204ENST00000539208 XDHP47989 1333 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 PLEKHA8P1O95397 391 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 GTF2F1P35269 517 aaKnown RBP eCLIP20.58■□□□□ 0.88
GNE-204ENST00000539208 KRT2P35908 639 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 PNOCQ13519 176 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 FAM196AQ6ZSG2 479 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 CNBD1Q8NA66 436 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 OSBPL5Q9H0X9 879 aaPredicted RBP20.58■□□□□ 0.88
GNE-204ENST00000539208 CABP5Q9NP86 173 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 ANKIB1Q9P2G1 1089 aa20.58■□□□□ 0.88
GNE-204ENST00000539208 MKRN1Q9UHC7 482 aaKnown RBP20.58■□□□□ 0.88
GNE-204ENST00000539208 GSDMDP57764 484 aa20.57■□□□□ 0.88
GNE-204ENST00000539208 VPS54Q9P1Q0 977 aa20.57■□□□□ 0.88
GNE-204ENST00000539208 MYO1BO43795 1136 aa20.56■□□□□ 0.88
GNE-204ENST00000539208 RRP9O43818 475 aaKnown RBP20.56■□□□□ 0.88
GNE-204ENST00000539208 LDHBP07195 334 aaKnown RBP20.56■□□□□ 0.88
GNE-204ENST00000539208 GSTO1P78417 241 aa20.56■□□□□ 0.88
GNE-204ENST00000539208 CTCFLQ8NI51 663 aaPredicted RBP20.56■□□□□ 0.88
GNE-204ENST00000539208 BMP15O95972 392 aa20.56■□□□□ 0.88
GNE-204ENST00000539208 DHX8Q14562 1220 aaKnown RBP20.56■□□□□ 0.88
GNE-204ENST00000539208 FOXP4Q8IVH2 680 aaPredicted RBP20.56■□□□□ 0.88
GNE-204ENST00000539208 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
GNE-204ENST00000539208 CNTNAP5Q8WYK1 1306 aa20.56■□□□□ 0.88
GNE-204ENST00000539208 TRIM75PA6NK02 468 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 CYP2D6P10635 497 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 EVX2Q03828 476 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 NT5DC1Q5TFE4 455 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 C12orf60Q5U649 245 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 ZNF804AQ7Z570 1209 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 BCL11BQ9C0K0 894 aaPredicted RBP20.55■□□□□ 0.88
GNE-204ENST00000539208 BRMS1Q9HCU9 246 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 PCDHA5Q9Y5H7 936 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 PPP4CP60510 307 aa20.55■□□□□ 0.88
GNE-204ENST00000539208 GRIN1Q05586 938 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms