RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CILPO75339 1184 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 LEFTY1O75610 366 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 FAM13AO94988 1023 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 POLR3DP05423 398 aaPredicted RBP2.06□□□□□ -2.08
COPB1-212ENST00000534771 NPR3P17342 541 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 ITIH2P19823 946 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 GDNFP39905 211 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 ID3Q02535 119 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 AP3B2Q13367 1082 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 TTLL4Q14679 1199 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 KIAA0319Q5VV43 1072 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 FERMT3Q86UX7 667 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 GALNT12Q8IXK2 581 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 GTF3C2Q8WUA4 911 aaPredicted RBP2.06□□□□□ -2.08
COPB1-212ENST00000534771 WDR89Q96FK6 387 aaPredicted RBP2.06□□□□□ -2.08
COPB1-212ENST00000534771 TCF12Q99081 682 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 ZC3H12CQ9C0D7 883 aaKnown RBP2.06□□□□□ -2.08
COPB1-212ENST00000534771 TNKS2Q9H2K2 1166 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 DISC1Q9NRI5 854 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 SLAIN2Q9P270 581 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 GTF2IRD1Q9UHL9 959 aa2.06□□□□□ -2.08
COPB1-212ENST00000534771 MYOCOSA0A1B0GUC4 107 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 SERINC4A6NH21 518 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 IGF2BP3O00425 579 aaKnown RBP eCLIP2.05□□□□□ -2.08
COPB1-212ENST00000534771 ZNF862O60290 1169 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 PPFIA2O75334 1257 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 NEFLP07196 543 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 HCLS1P14317 486 aaPredicted RBP2.05□□□□□ -2.08
COPB1-212ENST00000534771 ITPKAP23677 461 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 PTPN12Q05209 780 aaKnown RBP2.05□□□□□ -2.08
COPB1-212ENST00000534771 DPY19L2P1Q6NXN4 242 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 FAM214BQ7L5A3 538 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.05□□□□□ -2.08
COPB1-212ENST00000534771 TOP6BLQ8N6T0 577 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 HEXIM2Q96MH2 286 aaKnown RBP2.05□□□□□ -2.08
COPB1-212ENST00000534771 ZNF747Q9BV97 191 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 KRTAP3-1Q9BYR8 98 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 EHD4Q9H223 541 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 ZNF576Q9H609 170 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 CCDC86Q9H6F5 360 aaKnown RBP2.05□□□□□ -2.08
COPB1-212ENST00000534771 GCM1Q9NP62 436 aa2.05□□□□□ -2.08
COPB1-212ENST00000534771 LUC7LQ9NQ29 371 aaKnown RBP2.05□□□□□ -2.08
COPB1-212ENST00000534771 FZD6O60353 706 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 ZNF157P51786 506 aaPredicted RBP2.04□□□□□ -2.08
COPB1-212ENST00000534771 FKBP4Q02790 459 aaKnown RBP eCLIP2.04□□□□□ -2.08
COPB1-212ENST00000534771 MTMR3Q13615 1198 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 GPR162Q16538 588 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 NKPD1Q17RQ9 610 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 KIF4BQ2VIQ3 1234 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 ZFYVE27Q5T4F4 411 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 ZNF605Q86T29 641 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 GJD3Q8N144 294 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 RNF214Q8ND24 703 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 C8orf49Q96NF6 230 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 VPS11Q9H270 941 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 KRT82Q9NSB4 513 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 CCDC87Q9NVE4 849 aa2.04□□□□□ -2.08
COPB1-212ENST00000534771 GNAT3A8MTJ3 354 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 SEMA7AO75326 666 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 GSTP1P09211 210 aaKnown RBP2.03□□□□□ -2.08
COPB1-212ENST00000534771 CLCN7P51798 805 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 ERVK-24P63145 666 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 PPP2R3AQ06190 1150 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 SF3B2Q13435 895 aaKnown RBP2.03□□□□□ -2.08
COPB1-212ENST00000534771 FHL2Q14192 279 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 RPS26P11Q5JNZ5 115 aaPredicted RBP2.03□□□□□ -2.08
COPB1-212ENST00000534771 NPAS4Q8IUM7 802 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 SPACA3Q8IXA5 215 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 KCNB2Q92953 911 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 ISL2Q96A47 359 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 SHISA4Q96DD7 197 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 CHFRQ96EP1 664 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 CCDC120Q96HB5 630 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 C1QTNF3Q9BXJ4 246 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 CARS2Q9HA77 564 aaKnown RBP2.03□□□□□ -2.08
COPB1-212ENST00000534771 PRDM10Q9NQV6 1147 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 PPP4R2Q9NY27 417 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 MTMR7Q9Y216 660 aa2.03□□□□□ -2.08
COPB1-212ENST00000534771 TMEM238LA0A1B0GVL6 79 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 CYSRT1A8MQ03 144 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 NEFMP07197 916 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 SSFA2P28290 1259 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 TIGD5Q53EQ6 642 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 ZC3H12AQ5D1E8 599 aaKnown RBP2.02□□□□□ -2.09
COPB1-212ENST00000534771 USPL1Q5W0Q7 1092 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 PBXIP1Q96AQ6 731 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 HSPA12BQ96MM6 686 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 CRAMP1Q96RY5 1269 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 FOXQ1Q9C009 403 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 TMEM39AQ9NV64 488 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 TRAK1Q9UPV9 953 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 PCDHGC5Q9Y5F6 944 aa2.02□□□□□ -2.09
COPB1-212ENST00000534771 TEX51A0A1B0GUA7 166 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 FAM155AB1AL88 458 aaPredicted RBP2.01□□□□□ -2.09
COPB1-212ENST00000534771 PEX10O60683 326 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 CPNE3O75131 537 aaKnown RBP2.01□□□□□ -2.09
COPB1-212ENST00000534771 EOMESO95936 686 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 PRKCSHP14314 528 aaPredicted RBP2.01□□□□□ -2.09
COPB1-212ENST00000534771 RAC2P15153 192 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 ARNTP27540 789 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms