RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 MCM9Q9NXL9 1143 aa24.87■■□□□ 1.57
COL9A2-211ENST00000496215 SALL3Q9BXA9 1300 aa24.86■■□□□ 1.57
COL9A2-211ENST00000496215 ZNF280CQ8ND82 737 aa24.86■■□□□ 1.57
COL9A2-211ENST00000496215 ARHGAP39Q9C0H5 1083 aa24.86■■□□□ 1.57
COL9A2-211ENST00000496215 DCP1AQ9NPI6 582 aaPredicted RBP24.86■■□□□ 1.57
COL9A2-211ENST00000496215 GINM1Q9NU53 330 aa24.86■■□□□ 1.57
COL9A2-211ENST00000496215 ZBTB21Q9ULJ3 1066 aa24.86■■□□□ 1.57
COL9A2-211ENST00000496215 TNRC18O15417 2968 aaPredicted RBP24.85■■□□□ 1.57
COL9A2-211ENST00000496215 CYP2C8P10632 490 aa24.85■■□□□ 1.57
COL9A2-211ENST00000496215 CTGFP29279 349 aa24.85■■□□□ 1.57
COL9A2-211ENST00000496215 LRRFIP1Q32MZ4 808 aaKnown RBP24.85■■□□□ 1.57
COL9A2-211ENST00000496215 C17orf99Q6UX52 265 aa24.85■■□□□ 1.57
COL9A2-211ENST00000496215 ATP8A2Q9NTI2 1148 aa24.85■■□□□ 1.57
COL9A2-211ENST00000496215 CPA4Q9UI42 421 aa24.85■■□□□ 1.57
COL9A2-211ENST00000496215 BRCA2P51587 3418 aa24.84■■□□□ 1.57
COL9A2-211ENST00000496215 ZFYP08048 801 aaPredicted RBP24.84■■□□□ 1.57
COL9A2-211ENST00000496215 PLCD1P51178 756 aa24.84■■□□□ 1.57
COL9A2-211ENST00000496215 SPP2Q13103 211 aa24.84■■□□□ 1.57
COL9A2-211ENST00000496215 TATDN1Q6P1N9 297 aa24.84■■□□□ 1.57
COL9A2-211ENST00000496215 DDRGK1Q96HY6 314 aa24.84■■□□□ 1.57
COL9A2-211ENST00000496215 PUS7LQ9H0K6 701 aaKnown RBP24.84■■□□□ 1.57
COL9A2-211ENST00000496215 PRKAB2O43741 272 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 SOX10P56693 466 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 TREML2Q5T2D2 321 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 PROCA1Q8NCQ7 364 aaPredicted RBP24.83■■□□□ 1.57
COL9A2-211ENST00000496215 APPBP2Q92624 585 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 EFCC1Q9HA90 598 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 AGTPBP1Q9UPW5 1226 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 PTPN22Q9Y2R2 807 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 SLC45A1Q9Y2W3 748 aa24.83■■□□□ 1.57
COL9A2-211ENST00000496215 RNF113AO15541 343 aaKnown RBP24.82■■□□□ 1.56
COL9A2-211ENST00000496215 RGS19P49795 217 aa24.82■■□□□ 1.56
COL9A2-211ENST00000496215 LACTBP83111 547 aaPredicted RBP24.82■■□□□ 1.56
COL9A2-211ENST00000496215 SMC5Q8IY18 1101 aa24.82■■□□□ 1.56
COL9A2-211ENST00000496215 AMOTL1Q8IY63 956 aa24.82■■□□□ 1.56
COL9A2-211ENST00000496215 FSD1Q9BTV5 496 aa24.82■■□□□ 1.56
COL9A2-211ENST00000496215 WDR18Q9BV38 432 aa24.82■■□□□ 1.56
COL9A2-211ENST00000496215 SLC4A4Q9Y6R1 1079 aa24.82■■□□□ 1.56
COL9A2-211ENST00000496215 GH2P01242 217 aa24.81■■□□□ 1.56
COL9A2-211ENST00000496215 HMGCS2P54868 508 aa24.81■■□□□ 1.56
COL9A2-211ENST00000496215 ECM2O94769 699 aaPredicted RBP24.8■■□□□ 1.56
COL9A2-211ENST00000496215 CYP2D6P10635 497 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 BCRP11274 1271 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 SHMT1P34896 483 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 MTMR2Q13614 643 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 KIF22Q14807 665 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 ARHGEF6Q15052 776 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 CERKLQ49MI3 558 aaPredicted RBP24.8■■□□□ 1.56
COL9A2-211ENST00000496215 LNPKQ9C0E8 428 aa24.8■■□□□ 1.56
COL9A2-211ENST00000496215 PDE1AP54750 535 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 GABPAQ06546 454 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 ABCB5Q2M3G0 1257 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 SH3D19Q5HYK7 790 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 B4GALNT3Q6L9W6 998 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 OSBP2Q969R2 916 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 STAP2Q9UGK3 403 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 PNMA3Q9UL41 463 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 TAOK2Q9UL54 1235 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 MGAMO43451 1857 aa24.79■■□□□ 1.56
COL9A2-211ENST00000496215 IGHDP01880 384 aa24.78■■□□□ 1.56
COL9A2-211ENST00000496215 IRX6P78412 446 aaPredicted RBP24.78■■□□□ 1.56
COL9A2-211ENST00000496215 SMCR8Q8TEV9 937 aaPredicted RBP24.78■■□□□ 1.56
COL9A2-211ENST00000496215 SWAP70Q9UH65 585 aa24.78■■□□□ 1.56
COL9A2-211ENST00000496215 SMIM22K7EJ46 135 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 BACE1P56817 501 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 PABPC4Q13310 644 aaKnown RBP eCLIP24.77■■□□□ 1.56
COL9A2-211ENST00000496215 RAB3GAP1Q15042 981 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 TRIM47Q96LD4 638 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 STRBPQ96SI9 672 aaKnown RBP24.77■■□□□ 1.56
COL9A2-211ENST00000496215 CABP5Q9NP86 173 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 TMOD4Q9NZQ9 345 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 ARPP21Q9UBL0 812 aaPredicted RBP24.77■■□□□ 1.56
COL9A2-211ENST00000496215 PTCH2Q9Y6C5 1203 aa24.77■■□□□ 1.56
COL9A2-211ENST00000496215 USP17L10C9JJH3 530 aa24.76■■□□□ 1.55
COL9A2-211ENST00000496215 M0R2C6 588 aa24.76■■□□□ 1.55
COL9A2-211ENST00000496215 GPAA1O43292 621 aa24.76■■□□□ 1.55
COL9A2-211ENST00000496215 CHD1LQ86WJ1 897 aa24.76■■□□□ 1.55
COL9A2-211ENST00000496215 FEZ1Q99689 392 aa24.76■■□□□ 1.55
COL9A2-211ENST00000496215 C19orf81C9J6K1 198 aa24.75■■□□□ 1.55
COL9A2-211ENST00000496215 USP17L12C9JPN9 530 aa24.75■■□□□ 1.55
COL9A2-211ENST00000496215 USP17L21D6R901 530 aa24.75■■□□□ 1.55
COL9A2-211ENST00000496215 GNAT2P19087 354 aa24.75■■□□□ 1.55
COL9A2-211ENST00000496215 C12orf60Q5U649 245 aa24.75■■□□□ 1.55
COL9A2-211ENST00000496215 SLC44A5Q8NCS7 719 aa24.75■■□□□ 1.55
COL9A2-211ENST00000496215 CYP2D7A0A087X1C5 515 aa24.74■■□□□ 1.55
COL9A2-211ENST00000496215 MPHOSPH10O00566 681 aaKnown RBP24.74■■□□□ 1.55
COL9A2-211ENST00000496215 NUCB1Q02818 461 aa24.74■■□□□ 1.55
COL9A2-211ENST00000496215 EVI5LQ96CN4 794 aa24.74■■□□□ 1.55
COL9A2-211ENST00000496215 DYNLL2Q96FJ2 89 aa24.74■■□□□ 1.55
COL9A2-211ENST00000496215 RBBP6Q7Z6E9 1792 aaKnown RBP24.74■■□□□ 1.55
COL9A2-211ENST00000496215 OSBPP22059 807 aa24.73■■□□□ 1.55
COL9A2-211ENST00000496215 GUCY1A2P33402 732 aa24.73■■□□□ 1.55
COL9A2-211ENST00000496215 PSMC4P43686 418 aa24.73■■□□□ 1.55
COL9A2-211ENST00000496215 GIMAP6Q6P9H5 292 aa24.73■■□□□ 1.55
COL9A2-211ENST00000496215 CTR9Q6PD62 1173 aa24.73■■□□□ 1.55
COL9A2-211ENST00000496215 GSG1L2A8MUP6 293 aa24.72■■□□□ 1.55
COL9A2-211ENST00000496215 GNRH1P01148 92 aa24.72■■□□□ 1.55
COL9A2-211ENST00000496215 ZMYM1Q5SVZ6 1142 aa24.72■■□□□ 1.55
COL9A2-211ENST00000496215 C16orf86Q6ZW13 317 aa24.72■■□□□ 1.55
COL9A2-211ENST00000496215 ARMC5Q96C12 935 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms