RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NPHP1O15259 732 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 PRDX5P30044 214 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 GRAPQ13588 217 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 NBPF11Q86T75 865 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
CHTOP-206ENST00000495554 GRAPLQ8TC17 118 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-206ENST00000495554 CUTAO60888 179 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 MYRIPQ8NFW9 859 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 FOXP1Q9H334 677 aaPredicted RBP17.04■□□□□ 0.32
CHTOP-206ENST00000495554 CYP2D7A0A087X1C5 515 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
CHTOP-206ENST00000495554 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 NLRP12P59046 1061 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 LRMPQ12912 555 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 SEC23AQ15436 765 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 RESP18Q5W5W9 173 aa17.04■□□□□ 0.32
CHTOP-206ENST00000495554 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 TNKSO95271 1327 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 BTBD18B2RXH4 712 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 NEMFO60524 1076 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-206ENST00000495554 DIS3L2Q8IYB7 885 aaKnown RBP17.03■□□□□ 0.32
CHTOP-206ENST00000495554 NUP133Q8WUM0 1156 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 CCDC144BQ3MJ40 725 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 CACTINQ8WUQ7 758 aaKnown RBP17.03■□□□□ 0.32
CHTOP-206ENST00000495554 JAG2Q9Y219 1238 aa17.03■□□□□ 0.32
CHTOP-206ENST00000495554 BAZ2AQ9UIF9 1905 aaKnown RBP17.02■□□□□ 0.32
CHTOP-206ENST00000495554 FGRP09769 529 aa17.02■□□□□ 0.32
CHTOP-206ENST00000495554 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
CHTOP-206ENST00000495554 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
CHTOP-206ENST00000495554 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.32
CHTOP-206ENST00000495554 ECM29Q5VYK3 1845 aa17.02■□□□□ 0.32
CHTOP-206ENST00000495554 EVX2Q03828 476 aa17.02■□□□□ 0.31
CHTOP-206ENST00000495554 PROM2Q8N271 834 aa17.02■□□□□ 0.31
CHTOP-206ENST00000495554 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.31
CHTOP-206ENST00000495554 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.31
CHTOP-206ENST00000495554 TUBE1Q9UJT0 475 aa17.02■□□□□ 0.31
CHTOP-206ENST00000495554 MYH13Q9UKX3 1938 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 LRRC8AQ8IWT6 810 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
CHTOP-206ENST00000495554 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
CHTOP-206ENST00000495554 AATFQ9NY61 560 aaKnown RBP eCLIP17.01■□□□□ 0.31
CHTOP-206ENST00000495554 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 KCNJ14Q9UNX9 436 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 LEMD3Q9Y2U8 911 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 BIN1O00499 593 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 TRIM37O94972 964 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 SERPINB2P05120 415 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 TPM4P67936 248 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 CRY2Q49AN0 593 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 CLIC6Q96NY7 704 aa17.01■□□□□ 0.31
CHTOP-206ENST00000495554 SMTNL1A8MU46 457 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 USP17L12C9JPN9 530 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 USP17L21D6R901 530 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 TOB1P50616 345 aaPredicted RBP17■□□□□ 0.31
CHTOP-206ENST00000495554 TMED8Q6PL24 325 aaPredicted RBP17■□□□□ 0.31
CHTOP-206ENST00000495554 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 IQCA1Q86XH1 822 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
CHTOP-206ENST00000495554 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
CHTOP-206ENST00000495554 KCNH3Q9ULD8 1083 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
CHTOP-206ENST00000495554 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
CHTOP-206ENST00000495554 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
CHTOP-206ENST00000495554 XBP1P17861 261 aa16.99■□□□□ 0.31
CHTOP-206ENST00000495554 AKAP17AQ02040 695 aaKnown RBP16.99■□□□□ 0.31
CHTOP-206ENST00000495554 IFIT1BQ5T764 474 aaKnown RBP16.99■□□□□ 0.31
CHTOP-206ENST00000495554 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
CHTOP-206ENST00000495554 IKBKBO14920 756 aa16.99■□□□□ 0.31
CHTOP-206ENST00000495554 IGSF3O75054 1194 aa16.99■□□□□ 0.31
CHTOP-206ENST00000495554 ELOA2Q8IYF1 753 aaPredicted RBP16.99■□□□□ 0.31
CHTOP-206ENST00000495554 GPR101Q96P66 508 aaPredicted RBP16.99■□□□□ 0.31
CHTOP-206ENST00000495554 XDHP47989 1333 aa16.99■□□□□ 0.31
CHTOP-206ENST00000495554 PRDM1O75626 825 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 CALM1P0DP23 149 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 CALM2P0DP24 149 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 CALM3P0DP25 149 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 RBM28Q9NW13 759 aaKnown RBP16.98■□□□□ 0.31
CHTOP-206ENST00000495554 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 PTPREP23469 700 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 GSDMDP57764 484 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 GPSM2P81274 684 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 DDR1Q08345 913 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 GRIK5Q16478 980 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 C15orf52Q6ZUT6 534 aaKnown RBP16.98■□□□□ 0.31
CHTOP-206ENST00000495554 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
CHTOP-206ENST00000495554 IMPACTQ9P2X3 320 aa16.98■□□□□ 0.31
CHTOP-206ENST00000495554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHTOP-206ENST00000495554 NR5A1Q13285 461 aa16.97■□□□□ 0.31
CHTOP-206ENST00000495554 NCAPHQ15003 741 aa16.97■□□□□ 0.31
CHTOP-206ENST00000495554 LONRF3Q496Y0 759 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms