RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-212ENST00000484380 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
ABCD4-212ENST00000484380 USP17L12C9JPN9 530 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 USP17L21D6R901 530 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-212ENST00000484380 SYKP43405 635 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 XDHP47989 1333 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
ABCD4-212ENST00000484380 FAM196AQ6ZSG2 479 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 CATIPQ7Z7H3 387 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 CNBD1Q8NA66 436 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 NUP133Q8WUM0 1156 aa16.39■□□□□ 0.21
ABCD4-212ENST00000484380 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 CYP2D7A0A087X1C5 515 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 BECN2A8MW95 431 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 BTBD18B2RXH4 712 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 SMIM22K7EJ46 135 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
ABCD4-212ENST00000484380 NLRP12P59046 1061 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 TROAPQ12815 778 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 STK11IPQ8N1F8 1099 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 MPNDQ8N594 471 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
ABCD4-212ENST00000484380 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-212ENST00000484380 CHAF1AQ13111 956 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-212ENST00000484380 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
ABCD4-212ENST00000484380 KRI1Q8N9T8 703 aaKnown RBP16.38■□□□□ 0.21
ABCD4-212ENST00000484380 DDX60LQ5H9U9 1706 aaKnown RBP16.37■□□□□ 0.21
ABCD4-212ENST00000484380 XBP1P17861 261 aa16.37■□□□□ 0.21
ABCD4-212ENST00000484380 PTGS1P23219 599 aa16.37■□□□□ 0.21
ABCD4-212ENST00000484380 ZRSR1Q15695 479 aaKnown RBP16.37■□□□□ 0.21
ABCD4-212ENST00000484380 CRY2Q49AN0 593 aa16.37■□□□□ 0.21
ABCD4-212ENST00000484380 DZIP1Q86YF9 867 aaKnown RBP16.37■□□□□ 0.21
ABCD4-212ENST00000484380 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
ABCD4-212ENST00000484380 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
ABCD4-212ENST00000484380 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 NPHP1O15259 732 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
ABCD4-212ENST00000484380 PKN1Q16512 942 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 TMTC3Q6ZXV5 915 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 AOPEPQ8N6M6 819 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
ABCD4-212ENST00000484380 NOL10Q9BSC4 688 aaKnown RBP16.36■□□□□ 0.21
ABCD4-212ENST00000484380 LRRC4BQ9NT99 713 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 CLIP2Q9UDT6 1046 aa16.36■□□□□ 0.21
ABCD4-212ENST00000484380 RGS17Q9UGC6 210 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-212ENST00000484380 MKRN1Q9UHC7 482 aaKnown RBP16.36■□□□□ 0.21
ABCD4-212ENST00000484380 R3HCC1Q9Y3T6 440 aaKnown RBP16.36■□□□□ 0.21
ABCD4-212ENST00000484380 PTPREP23469 700 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 GSTO1P78417 241 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 PDE4BQ07343 736 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 ZNF804AQ7Z570 1209 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 PHF20Q9BVI0 1012 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-212ENST00000484380 FBXO2Q9UK22 296 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-212ENST00000484380 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 CEP131Q9UPN4 1083 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 CNTNAP5Q8WYK1 1306 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 DRC7Q8IY82 874 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 CMTR1Q8N1G2 835 aaKnown RBP16.35■□□□□ 0.21
ABCD4-212ENST00000484380 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-212ENST00000484380 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
ABCD4-212ENST00000484380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
ABCD4-212ENST00000484380 IKBKBO14920 756 aa16.34■□□□□ 0.21
ABCD4-212ENST00000484380 PRDM1O75626 825 aa16.34■□□□□ 0.21
ABCD4-212ENST00000484380 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
ABCD4-212ENST00000484380 RXRBP28702 533 aa16.34■□□□□ 0.21
ABCD4-212ENST00000484380 PPP4CP60510 307 aa16.34■□□□□ 0.21
ABCD4-212ENST00000484380 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
ABCD4-212ENST00000484380 BRWD3Q6RI45 1802 aa16.34■□□□□ 0.21
ABCD4-212ENST00000484380 A0A087WWV3 80 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 NEMFO60524 1076 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 GYS1P13807 737 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 KRT2P35908 639 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 NR5A1Q13285 461 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 KRBA2Q6ZNG9 492 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 KCNH3Q9ULD8 1083 aa16.33■□□□□ 0.21
ABCD4-212ENST00000484380 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.21
ABCD4-212ENST00000484380 SMTNL1A8MU46 457 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 ST5P78524 1137 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 C12orf60Q5U649 245 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 POTEAQ6S8J7 498 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 OXER1Q8TDS5 423 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 ANKS1AQ92625 1134 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
ABCD4-212ENST00000484380 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.2
ABCD4-212ENST00000484380 BMP15O95972 392 aa16.32■□□□□ 0.2
ABCD4-212ENST00000484380 CYP2D6P10635 497 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms