RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 BMP8BP34820 402 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 MAGEA10P43363 369 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-237ENST00000479169 BACE1P56817 501 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 HERVK_113P62684 666 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 MAP3K21Q5TCX8 1036 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 Q7L0L9 218 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 ADGRA1Q86SQ6 560 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
HDLBP-237ENST00000479169 ASNSP08243 561 aa13.54□□□□□ -0.24
HDLBP-237ENST00000479169 UQCRFS1P1P0C7P4 283 aa13.54□□□□□ -0.24
HDLBP-237ENST00000479169 HOXA7P31268 230 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-237ENST00000479169 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.242e-17■□□□□ 8.2
HDLBP-237ENST00000479169 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-237ENST00000479169 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
HDLBP-237ENST00000479169 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
HDLBP-237ENST00000479169 PORCNQ9H237 461 aa13.54□□□□□ -0.24
HDLBP-237ENST00000479169 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
HDLBP-237ENST00000479169 PALD1Q9ULE6 856 aa13.54□□□□□ -0.24
HDLBP-237ENST00000479169 FLT1P17948 1338 aa13.54□□□□□ -0.24
HDLBP-237ENST00000479169 GNAI2P04899 355 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-237ENST00000479169 CCL14Q16627 93 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 Q3C1V9 767 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 TTC39AQ5SRH9 613 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-237ENST00000479169 DEFB123Q8N688 67 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 GPRC5AQ8NFJ5 357 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
HDLBP-237ENST00000479169 RBPJLQ9UBG7 517 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
HDLBP-237ENST00000479169 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 BAG3O95817 575 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.25
HDLBP-237ENST00000479169 TRIM27P14373 513 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 PLCG2P16885 1265 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-237ENST00000479169 CCND3P30281 292 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-237ENST00000479169 PPP4CP60510 307 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 ERVK-9P63128 1117 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 ERVK-24P63145 666 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
HDLBP-237ENST00000479169 USP6NLQ92738 828 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 DBNDD2Q9BQY9 259 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
HDLBP-237ENST00000479169 C19orf81C9J6K1 198 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 CYP2E1P05181 493 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-237ENST00000479169 MAPK4P31152 587 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
HDLBP-237ENST00000479169 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 LRRC26Q2I0M4 334 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 TNNI3KQ59H18 835 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 MORN1Q5T089 497 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 GPR142Q7Z601 462 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 TDHQ8IZJ6 230 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 CLUAP1Q96AJ1 413 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
HDLBP-237ENST00000479169 FPGT-TNNI3KV9GXZ4 949 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 EYSQ5T1H1 3165 aa13.51□□□□□ -0.25
HDLBP-237ENST00000479169 COL6A1P12109 1028 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 ZAP70P43403 619 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 ZYXQ15942 572 aaKnown RBP13.5□□□□□ -0.25
HDLBP-237ENST00000479169 LRIT3Q3SXY7 679 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 LHX8Q68G74 356 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 GPR153Q6NV75 609 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 PLEKHH3Q7Z736 793 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 FOXP4Q8IVH2 680 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-237ENST00000479169 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
HDLBP-237ENST00000479169 FRAT1Q92837 279 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-237ENST00000479169 PIH1D3Q9NQM4 214 aaKnown RBP13.5□□□□□ -0.25
HDLBP-237ENST00000479169 NDUFB9Q9Y6M9 179 aa13.5□□□□□ -0.25
HDLBP-237ENST00000479169 BCAR3O75815 825 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 CNMDO75829 334 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 GH2P01242 217 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 RGS2P41220 211 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-237ENST00000479169 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 USP17L2Q6R6M4 530 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 ATF7IPQ6VMQ6 1270 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 TRMT44Q8IYL2 757 aaKnown RBP13.49□□□□□ -0.25
HDLBP-237ENST00000479169 APBA2Q99767 749 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
HDLBP-237ENST00000479169 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 CYP7A1P22680 504 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 OS9Q13438 667 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-237ENST00000479169 POLA2Q14181 598 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 FEZ1Q99689 392 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
HDLBP-237ENST00000479169 GPR108Q9NPR9 543 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 GINM1Q9NU53 330 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 TLR7Q9NYK1 1049 aaKnown RBP13.48□□□□□ -0.25
HDLBP-237ENST00000479169 FLRT1Q9NZU1 646 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
HDLBP-237ENST00000479169 PRUNE2Q8WUY3 3088 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms