RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 DYNLL2Q96FJ2 89 aa12.31□□□□□ -0.44
HDAC6-222ENST00000478095 EHD4Q9H223 541 aa12.31□□□□□ -0.44
HDAC6-222ENST00000478095 PICK1Q9NRD5 415 aa12.31□□□□□ -0.44
HDAC6-222ENST00000478095 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
HDAC6-222ENST00000478095 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
HDAC6-222ENST00000478095 THSD7BQ9C0I4 1608 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 IRF6O14896 467 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 FOXN1O15353 648 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 CTNND1O60716 968 aaKnown RBP12.3□□□□□ -0.44
HDAC6-222ENST00000478095 PTPRAP18433 802 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 GNAT2P19087 354 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 CAP2P40123 477 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 TDO2P48775 406 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 JAG1P78504 1218 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
HDAC6-222ENST00000478095 ZNF589Q86UQ0 364 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-222ENST00000478095 METTL16Q86W50 562 aaKnown RBP12.3□□□□□ -0.44
HDAC6-222ENST00000478095 AMOTL1Q8IY63 956 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 SLC44A5Q8NCS7 719 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 BEGAINQ9BUH8 593 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 HELLSQ9NRZ9 838 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
HDAC6-222ENST00000478095 PCNTO95613 3336 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 OTOFQ9HC10 1997 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 MANSC4A6NHS7 340 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-222ENST00000478095 MINDY4BA8MYZ0 360 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
HDAC6-222ENST00000478095 FOXP2O15409 715 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 SHMT1P34896 483 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 PPATQ06203 517 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 GABPAQ06546 454 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 SREBF2Q12772 1141 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 PPIL2Q13356 520 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 MCMDC2Q4G0Z9 681 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 ARPP21Q9UBL0 812 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-222ENST00000478095 ZHX2Q9Y6X8 837 aa12.29□□□□□ -0.44
HDAC6-222ENST00000478095 CCL15-CCL14A0A0B4J2E2 113 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 TRIM75PA6NK02 468 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC6-222ENST00000478095 TRPA1O75762 1119 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 GH2P01242 217 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 GTF2A2P52657 109 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 CCL15Q16663 113 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 NACAP1Q9BZK3 213 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 NAPBQ9H115 298 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 ZBTB21Q9ULJ3 1066 aa12.28□□□□□ -0.44
HDAC6-222ENST00000478095 DDX60LQ5H9U9 1706 aaKnown RBP12.28□□□□□ -0.44
HDAC6-222ENST00000478095 HIP1O00291 1037 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 TM4SF4P48230 202 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 SNAPC2Q13487 334 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 CERKLQ49MI3 558 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-222ENST00000478095 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 TICAM2Q86XR7 235 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 PTPN18Q99952 460 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 IL25Q9H293 177 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 RNF186Q9NXI6 227 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 CCDC171Q6TFL3 1326 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 SIPA1L1O43166 1804 aa12.27□□□□□ -0.45
HDAC6-222ENST00000478095 NAV1Q8NEY1 1877 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 MPHOSPH10O00566 681 aaKnown RBP12.26□□□□□ -0.45
HDAC6-222ENST00000478095 ASNSP08243 561 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 CETPP11597 493 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 CDK8P49336 464 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 SPP2Q13103 211 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 RAB3GAP1Q15042 981 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 SBK1Q52WX2 424 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 FAM43AQ8N2R8 423 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 AFG3L2Q9Y4W6 797 aa12.26□□□□□ -0.45
HDAC6-222ENST00000478095 FOCADQ5VW36 1801 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 TESPA1A2RU30 521 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-222ENST00000478095 BTBD19C9JJ37 291 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 PRDM1O75626 825 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 TBC1D8O95759 1140 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
HDAC6-222ENST00000478095 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
HDAC6-222ENST00000478095 AKR1B1P15121 316 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 CHMLP26374 656 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-222ENST00000478095 INHBEP58166 350 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 DGKZQ13574 1117 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 GADL1Q6ZQY3 521 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 CLEC10AQ8IUN9 316 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 CABP5Q9NP86 173 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 CDK5RAP2Q96SN8 1893 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 MYH7P12883 1935 aa12.25□□□□□ -0.45
HDAC6-222ENST00000478095 AK9Q5TCS8 1911 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms