RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 MEGF6O75095 1541 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 ANKRD33BA6NCL7 494 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 GPR182O15218 404 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 TREHO43280 583 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 SIK1P57059 783 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 COL19A1Q14993 1142 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 TRAPPC3LQ5T215 181 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 ZNF438Q7Z4V0 828 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 MTERF4Q7Z6M4 381 aaKnown RBP6.05□□□□□ -1.44
LRCH3-214ENST00000473177 LINC00116Q8NCU8 138 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 IP6K1Q92551 441 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 SLC30A3Q99726 388 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 MBIPQ9NS73 344 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 CHMP5Q9NZZ3 219 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 USP31Q70CQ4 1352 aa6.05□□□□□ -1.44
LRCH3-214ENST00000473177 N4BP2Q86UW6 1770 aaPredicted RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 A6NHS1 94 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 C2CD2LO14523 706 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 SASH3O75995 380 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 MAP3K6O95382 1288 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 TPM2P07951 284 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 BMP4P12644 408 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 KCNA3P22001 575 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 RFC4P35249 363 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 AMPHP49418 695 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 TERF1P54274 439 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 CNGB1Q14028 1251 aaPredicted RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 DSC3Q14574 896 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 RNFT1Q5M7Z0 435 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 ZNF468Q5VIY5 522 aaPredicted RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 DUSP27Q5VZP5 1158 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 NPAS4Q8IUM7 802 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 TRMT2AQ8IZ69 625 aaKnown RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 RGS22Q8NE09 1264 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 COL25A1Q9BXS0 654 aaPredicted RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 MYH16Q9H6N6 1097 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 ELP3Q9H9T3 547 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 AVENQ9NQS1 362 aaPredicted RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 NSFL1CQ9UNZ2 370 aaKnown RBP6.04□□□□□ -1.44
LRCH3-214ENST00000473177 TOGARAM1Q9Y4F4 1720 aa6.04□□□□□ -1.44
LRCH3-214ENST00000473177 FRAT2O75474 233 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 TNFRSF21O75509 655 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 NFKB1P19838 968 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 TARSP26639 723 aaKnown RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 CHRNA5P30532 468 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 MAP2K3P46734 347 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 FMR1Q06787 632 aaKnown RBP eCLIP6.03□□□□□ -1.448e-8■■■■■ 27.8
LRCH3-214ENST00000473177 HSP90AA2PQ14568 343 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 HDGFL2Q7Z4V5 671 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 WDR63Q8IWG1 891 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 USHBP1Q8N6Y0 703 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 CFAP53Q96M91 514 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 PNMA5Q96PV4 448 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 ABI2Q9NYB9 513 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 ZFATQ9P243 1243 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 PRR12Q9ULL5 1215 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 ADAMTS8Q9UP79 889 aa6.03□□□□□ -1.44
LRCH3-214ENST00000473177 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 FAM208AQ9UK61 1670 aaKnown RBP6.03□□□□□ -1.44
LRCH3-214ENST00000473177 KIAA1551Q9HCM1 1747 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 KIF16BQ96L93 1317 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 SIN3BO75182 1162 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 RARAP10276 462 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 ARAFP10398 606 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 GYS1P13807 737 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 PPP2R1AP30153 589 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 HOXC9P31274 260 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 KRT76Q01546 638 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 PLCB3Q01970 1234 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 GRM1Q13255 1194 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 DEFB115Q30KQ5 88 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 CC2D1BQ5T0F9 858 aaKnown RBP6.02□□□□□ -1.45
LRCH3-214ENST00000473177 KRT25Q7Z3Z0 450 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 HSCBQ8IWL3 235 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 SNX29Q8TEQ0 813 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 PIGBQ92521 554 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 BHMTQ93088 406 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 NIF3L1Q9GZT8 377 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 TMOD3Q9NYL9 352 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 ABT1Q9ULW3 272 aaKnown RBP6.02□□□□□ -1.45
LRCH3-214ENST00000473177 C4AP0C0L4 1744 aa6.02□□□□□ -1.45
LRCH3-214ENST00000473177 ZNF521Q96K83 1311 aa6.01□□□□□ -1.45
LRCH3-214ENST00000473177 WDR33Q9C0J8 1336 aaKnown RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 KDM6AO15550 1401 aaPredicted RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 LTN1O94822 1766 aa6.01□□□□□ -1.45
LRCH3-214ENST00000473177 IPO8O15397 1037 aaKnown RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 PLIN1O60240 522 aa6.01□□□□□ -1.45
LRCH3-214ENST00000473177 HOXD8P13378 290 aaPredicted RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 NCLP19338 710 aaKnown RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 SOX18P35713 384 aa6.01□□□□□ -1.45
LRCH3-214ENST00000473177 RGS3P49796 1198 aa6.01□□□□□ -1.45
LRCH3-214ENST00000473177 SRSF11Q05519 484 aaKnown RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 ITPK1Q13572 414 aa6.01□□□□□ -1.45
LRCH3-214ENST00000473177 EAPPQ56P03 285 aaPredicted RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 TTC39BQ5VTQ0 682 aaPredicted RBP6.01□□□□□ -1.45
LRCH3-214ENST00000473177 RAB44Q7Z6P3 723 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms