RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 SSBP4Q9BWG4 385 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-213ENST00000471667 PPP1R12CQ9BZL4 782 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 ZNF408Q9H9D4 720 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 ZFATQ9P243 1243 aa5.25□□□□□ -1.57
LRCH3-213ENST00000471667 BRCA1P38398 1863 aaKnown RBP5.25□□□□□ -1.57
LRCH3-213ENST00000471667 QRICH2Q9H0J4 1663 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 TMEM265A0A087WTH1 108 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 H0YGN5 161 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 TARSP26639 723 aaKnown RBP5.24□□□□□ -1.57
LRCH3-213ENST00000471667 ARSDP51689 593 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 DHX32Q7L7V1 743 aaKnown RBP5.24□□□□□ -1.57
LRCH3-213ENST00000471667 C2CD5Q86YS7 1000 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 DTWD1Q8N5C7 304 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 TRPM4Q8TD43 1214 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 ZNF622Q969S3 477 aaKnown RBP eCLIP5.24□□□□□ -1.576e-18■□□□□ 10.5
LRCH3-213ENST00000471667 CALR3Q96L12 384 aaKnown RBP5.24□□□□□ -1.57
LRCH3-213ENST00000471667 RNF186Q9NXI6 227 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 FRRS1LQ9P0K9 344 aa5.24□□□□□ -1.57
LRCH3-213ENST00000471667 RNF123Q5XPI4 1314 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 TTC21AQ8NDW8 1320 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 PCDH11XQ9BZA7 1347 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 PCDH11YQ9BZA8 1340 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 CACNA1AO00555 2505 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-213ENST00000471667 ZBTB42B2RXF5 422 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 WEE1P30291 646 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 ITGAEP38570 1179 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 HUNKP57058 714 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 PLAURQ03405 335 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 GRIK5Q16478 980 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 CST9Q5W186 159 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 ELMSAN1Q6PJG2 1045 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 USP50Q70EL3 339 aaPredicted RBP5.23□□□□□ -1.57
LRCH3-213ENST00000471667 FBXO11Q86XK2 927 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 WFDC8Q8IUA0 241 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 GPC2Q8N158 579 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 DEFB123Q8N688 67 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 RAPGEF4Q8WZA2 1011 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 DPF3Q92784 378 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 IFT43Q96FT9 208 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 KRTAP9-2Q9BYQ4 174 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 VRTNQ9H8Y1 702 aa5.23□□□□□ -1.57
LRCH3-213ENST00000471667 UBR3Q6ZT12 1888 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 INSRP06213 1382 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 USP31Q70CQ4 1352 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 SASH3O75995 380 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 MICAL2O94851 1124 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 RARAP10276 462 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 EIF6P56537 245 aaKnown RBP5.22□□□□□ -1.57
LRCH3-213ENST00000471667 GPLD1P80108 840 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 KIF23Q02241 960 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-213ENST00000471667 LRP8Q14114 963 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 RGMBQ6NW40 437 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 NBPF11Q86T75 865 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 WFDC12Q8WWY7 111 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 JDP2Q8WYK2 163 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 VTI1AQ96AJ9 217 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 LTV1Q96GA3 475 aaPredicted RBP5.22□□□□□ -1.57
LRCH3-213ENST00000471667 C11orf16Q9NQ32 467 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 NR2E3Q9Y5X4 410 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 WASHC2AQ641Q2 1341 aa5.22□□□□□ -1.57
LRCH3-213ENST00000471667 TRIOBPQ9H2D6 2365 aa5.21□□□□□ -1.57
LRCH3-213ENST00000471667 A0A0C4DFX4 3053 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 NPHP1O15259 732 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 RPS6KA4O75676 772 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 ARID4AP29374 1257 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-213ENST00000471667 NOS3P29474 1203 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 PDE6BP35913 854 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 IREB2P48200 963 aaKnown RBP5.21□□□□□ -1.58
LRCH3-213ENST00000471667 ZNF157P51786 506 aaPredicted RBP5.21□□□□□ -1.58
LRCH3-213ENST00000471667 C11orf91Q3C1V1 193 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 SYNE4Q8N205 404 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 TTC9Q92623 222 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 MYO19Q96H55 970 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 SMG9Q9H0W8 520 aaKnown RBP5.21□□□□□ -1.58
LRCH3-213ENST00000471667 TMOD3Q9NYL9 352 aa5.21□□□□□ -1.58
LRCH3-213ENST00000471667 TOGARAM1Q9Y4F4 1720 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 POLRMTO00411 1230 aaKnown RBP5.2□□□□□ -1.58
LRCH3-213ENST00000471667 TRAF5O00463 557 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 OPLAHO14841 1288 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 HYAL3O43820 417 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-213ENST00000471667 EIF2AK2P19525 551 aaKnown RBP5.2□□□□□ -1.58
LRCH3-213ENST00000471667 NRLP54845 237 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 SLC4A8Q2Y0W8 1093 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 IGF2-ASQ6U949 168 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 HFE2Q6ZVN8 426 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 C2orf69Q8N8R5 385 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 ZNF296Q8WUU4 475 aaPredicted RBP5.2□□□□□ -1.58
LRCH3-213ENST00000471667 HTATIP2Q9BUP3 242 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 USP20Q9Y2K6 914 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 TAF1LQ8IZX4 1826 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 TTC21BQ7Z4L5 1316 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 CNTNAP4Q9C0A0 1308 aa5.2□□□□□ -1.58
LRCH3-213ENST00000471667 A6NJR5 290 aa5.19□□□□□ -1.58
LRCH3-213ENST00000471667 FKTNO75072 461 aa5.19□□□□□ -1.58
LRCH3-213ENST00000471667 XYLBO75191 536 aa5.19□□□□□ -1.58
LRCH3-213ENST00000471667 DEAF1O75398 565 aaPredicted RBP5.19□□□□□ -1.58
LRCH3-213ENST00000471667 EN2P19622 333 aaPredicted RBP5.19□□□□□ -1.58
LRCH3-213ENST00000471667 DDR1Q08345 913 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms