RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 LTBP2Q14767 1821 aa16.66■□□□□ 0.26
HDAC6-215ENST00000465457 RFX7Q2KHR2 1363 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 PRDX5P30044 214 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 NBPF3Q9H094 633 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 C11orf49Q9H6J7 331 aa16.65■□□□□ 0.26
HDAC6-215ENST00000465457 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
HDAC6-215ENST00000465457 HMGCRP04035 888 aa16.64■□□□□ 0.25
HDAC6-215ENST00000465457 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-215ENST00000465457 MDM2Q00987 491 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-215ENST00000465457 ANKLE1Q8NAG6 615 aa16.64■□□□□ 0.25
HDAC6-215ENST00000465457 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
HDAC6-215ENST00000465457 PDE8BO95263 885 aa16.63■□□□□ 0.25
HDAC6-215ENST00000465457 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
HDAC6-215ENST00000465457 TRIB2Q92519 343 aa16.63■□□□□ 0.25
HDAC6-215ENST00000465457 COA7Q96BR5 231 aa16.63■□□□□ 0.25
HDAC6-215ENST00000465457 SLC45A1Q9Y2W3 748 aa16.63■□□□□ 0.25
HDAC6-215ENST00000465457 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
HDAC6-215ENST00000465457 PEX10O60683 326 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 CIAO1O76071 339 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 FGFR2P21802 821 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 IL27Q8NEV9 243 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 PI4K2BQ8TCG2 481 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 USP40Q9NVE5 1235 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 AGTPBP1Q9UPW5 1226 aa16.62■□□□□ 0.25
HDAC6-215ENST00000465457 PA2G4Q9UQ80 394 aaKnown RBP16.62■□□□□ 0.25
HDAC6-215ENST00000465457 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 FAM110CQ1W6H9 321 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 AACSQ86V21 672 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 GPR108Q9NPR9 543 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
HDAC6-215ENST00000465457 DDTLA6NHG4 134 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-215ENST00000465457 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
HDAC6-215ENST00000465457 IL15P40933 162 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-215ENST00000465457 LRRC26Q2I0M4 334 aa16.6■□□□□ 0.25
HDAC6-215ENST00000465457 HMX1Q9NP08 348 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-215ENST00000465457 DDX4Q9NQI0 724 aaKnown RBP16.6■□□□□ 0.25
HDAC6-215ENST00000465457 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
HDAC6-215ENST00000465457 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
HDAC6-215ENST00000465457 CAPN2P17655 700 aa16.59■□□□□ 0.25
HDAC6-215ENST00000465457 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
HDAC6-215ENST00000465457 HIP1O00291 1037 aa16.58■□□□□ 0.24
HDAC6-215ENST00000465457 COL6A1P12109 1028 aa16.58■□□□□ 0.24
HDAC6-215ENST00000465457 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
HDAC6-215ENST00000465457 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
HDAC6-215ENST00000465457 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
HDAC6-215ENST00000465457 SIL1Q9H173 461 aa16.58■□□□□ 0.24
HDAC6-215ENST00000465457 CYP2B6P20813 491 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 MCCP23508 829 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 CHMLP26374 656 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 WDR66Q8TBY9 1149 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 PRDM6Q9NQX0 595 aa16.57■□□□□ 0.24
HDAC6-215ENST00000465457 EYA2O00167 538 aa16.56■□□□□ 0.24
HDAC6-215ENST00000465457 IFIT1P09914 478 aaKnown RBP16.56■□□□□ 0.24
HDAC6-215ENST00000465457 PICALMQ13492 652 aa16.56■□□□□ 0.24
HDAC6-215ENST00000465457 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
HDAC6-215ENST00000465457 TSHZ3Q63HK5 1081 aa16.56■□□□□ 0.24
HDAC6-215ENST00000465457 ZSCAN29Q8IWY8 852 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-215ENST00000465457 SNX21Q969T3 373 aa16.56■□□□□ 0.24
HDAC6-215ENST00000465457 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
HDAC6-215ENST00000465457 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
HDAC6-215ENST00000465457 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
HDAC6-215ENST00000465457 CCND3P30281 292 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-215ENST00000465457 HMGCS2P54868 508 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 FAM109BQ6ICB4 259 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-215ENST00000465457 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 RAPGEFL1Q9UHV5 662 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 RLFQ13129 1914 aa16.55■□□□□ 0.24
HDAC6-215ENST00000465457 GAKO14976 1311 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
HDAC6-215ENST00000465457 ENTPD3O75355 529 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 TFCP2Q12800 502 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 SPP2Q13103 211 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 RRP1BQ14684 758 aaKnown RBP16.54■□□□□ 0.24
HDAC6-215ENST00000465457 RABEP1Q15276 862 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 CCL14Q16627 93 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 CDX2Q99626 313 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-215ENST00000465457 ASCC2Q9H1I8 757 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-215ENST00000465457 PNMA3Q9UL41 463 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
HDAC6-215ENST00000465457 RAD50Q92878 1312 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 CDK5RAP2Q96SN8 1893 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 SLC5A1P13866 664 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 ATP5JP18859 108 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 ZNF697Q5TEC3 545 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 LHX8Q68G74 356 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
HDAC6-215ENST00000465457 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms