RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 SMG9Q9H0W8 520 aaKnown RBP7.43□□□□□ -1.22
RAB28P3-201ENST00000448325 FAM86C1Q9NVL1 165 aa7.43□□□□□ -1.22
RAB28P3-201ENST00000448325 MAPRE3Q9UPY8 281 aa7.43□□□□□ -1.22
RAB28P3-201ENST00000448325 TRBV23-1A0A0A0MS06 115 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 SHTN1A0MZ66 631 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 SLC35F4A4IF30 521 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 CHURC1-FNTBB4DL54 471 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 H7C1W4 665 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 MAN1A2O60476 641 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 RASGRP1O95267 797 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 AVPP01185 164 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 EPHA1P21709 976 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 FGFR3P22607 806 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 CDC25BP30305 580 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 POLR2BP30876 1174 aaKnown RBP7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 GSTM4Q03013 218 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 PTSQ03393 145 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 FNDC3BQ53EP0 1204 aaKnown RBP7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 CDCP2Q5VXM1 449 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 WWC2Q6AWC2 1192 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 LHFPL2Q6ZUX7 228 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 SYT9Q86SS6 491 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 LRRTM3Q86VH5 581 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 LEO1Q8WVC0 666 aaPredicted RBP7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 ASPSCR1Q9BZE9 553 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 CCDC86Q9H6F5 360 aaKnown RBP7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 NAGPAQ9UK23 515 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 ZNF214Q9UL59 606 aaPredicted RBP7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 ATXN7L1Q9ULK2 861 aaPredicted RBP7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 SNCAIPQ9Y6H5 919 aa7.42□□□□□ -1.22
RAB28P3-201ENST00000448325 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 KIF3BO15066 747 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 EYA4O95677 639 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 SCGB1D2O95969 90 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 GMPRP36959 345 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 PCSK7Q16549 785 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 FAM182BQ5T319 152 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 HDXQ7Z353 690 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 C14orf80Q86SX3 495 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 TRIM22Q8IYM9 498 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 SLC6A14Q9UN76 642 aa7.41□□□□□ -1.22
RAB28P3-201ENST00000448325 FAM83GA6ND36 823 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 DCDC2CA8MYV0 355 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 SNRPBP14678 240 aaKnown RBP7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 CDC27P30260 824 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 RAB27AP51159 221 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 STRN3Q13033 797 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 UBE4AQ14139 1066 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 GDF6Q6KF10 455 aaPredicted RBP7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 ELMSAN1Q6PJG2 1045 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 DDX46Q7L014 1031 aaKnown RBP7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 RIN3Q8TB24 985 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 RELTQ969Z4 430 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 ZNF837Q96EG3 531 aaPredicted RBP7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 TRERF1Q96PN7 1200 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 SMAD5Q99717 465 aaKnown RBP7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 LGR4Q9BXB1 951 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 PRDM16Q9HAZ2 1276 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 SENP2Q9HC62 589 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 SUSD2Q9UGT4 822 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 CSADQ9Y600 493 aa7.4□□□□□ -1.22
RAB28P3-201ENST00000448325 DNAJC25-GNG10A0A024R161 153 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 AGRPO00253 132 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 ZNF862O60290 1169 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 DNAJC8O75937 253 aaPredicted RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 TP53P04637 393 aaPredicted RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 GRK4P32298 578 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 PCBP4P57723 403 aaKnown RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 KCNMA1Q12791 1236 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 CYFIP1Q7L576 1253 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 SLC7A3Q8WY07 619 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 DDX1Q92499 740 aaKnown RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 ELMO3Q96BJ8 720 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 WDR89Q96FK6 387 aaPredicted RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 LPIN3Q9BQK8 851 aa7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 CCDC8Q9H0W5 538 aaPredicted RBP7.39□□□□□ -1.23
RAB28P3-201ENST00000448325 PRAMEF27A3QJZ7 478 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 AKAP10O43572 662 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 PGRP06401 933 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 CTSBP07858 339 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 ARAFP10398 606 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 LIG1P18858 919 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 SMCPP49901 116 aaPredicted RBP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 CABP4P57796 275 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 HSP90AA2PQ14568 343 aaPredicted RBP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 PCBP1Q15365 356 aaKnown RBP eCLIP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 TDRD10Q5VZ19 366 aaKnown RBP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 CCSAPQ6IQ19 270 aaPredicted RBP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 C12orf40Q86WS4 652 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 SCUBE1Q8IWY4 988 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 APBA2Q99767 749 aa7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 AARSD1Q9BTE6 412 aaKnown RBP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 MRPL4Q9BYD3 311 aaKnown RBP7.38□□□□□ -1.23
RAB28P3-201ENST00000448325 PHLDB1Q86UU1 1377 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms