RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 TRIOBPQ9H2D6 2365 aa27.63■■■□□ 2.01
HOMER3-203ENST00000433218 TNPO2O14787 897 aaKnown RBP27.62■■■□□ 2.01
HOMER3-203ENST00000433218 HOXD10P28358 340 aa27.62■■■□□ 2.01
HOMER3-203ENST00000433218 SH3D19Q5HYK7 790 aa27.62■■■□□ 2.01
HOMER3-203ENST00000433218 FAM110CQ1W6H9 321 aa27.61■■■□□ 2.01
HOMER3-203ENST00000433218 UNC93B1Q9H1C4 597 aa27.61■■■□□ 2.01
HOMER3-203ENST00000433218 RLFQ13129 1914 aa27.61■■■□□ 2.01
HOMER3-203ENST00000433218 CHGBP05060 677 aa27.6■■■□□ 2.01
HOMER3-203ENST00000433218 MS4A1P11836 297 aa27.6■■■□□ 2.01
HOMER3-203ENST00000433218 DNAJC2Q99543 621 aaKnown RBP27.6■■■□□ 2.01
HOMER3-203ENST00000433218 WDR18Q9BV38 432 aa27.6■■■□□ 2.01
HOMER3-203ENST00000433218 DDX19BQ9UMR2 479 aa27.6■■■□□ 2.01
HOMER3-203ENST00000433218 ADCY3O60266 1144 aa27.59■■■□□ 2.01
HOMER3-203ENST00000433218 ASNSP08243 561 aa27.59■■■□□ 2.01
HOMER3-203ENST00000433218 USP5P45974 858 aa27.59■■■□□ 2.01
HOMER3-203ENST00000433218 PNMA3Q9UL41 463 aa27.59■■■□□ 2.01
HOMER3-203ENST00000433218 LAMA3Q16787 3333 aa27.59■■■□□ 2.01
HOMER3-203ENST00000433218 DNAH12Q6ZR08 3092 aa27.59■■■□□ 2.01
HOMER3-203ENST00000433218 INHAP05111 366 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 PDE6AP16499 860 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 BACE1P56817 501 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 POTEEQ6S8J3 1075 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 SLAIN1Q8ND83 568 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 AS3MTQ9HBK9 375 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 TXNRD2Q9NNW7 524 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 BIN2Q9UBW5 565 aaPredicted RBP27.58■■■□□ 2.01
HOMER3-203ENST00000433218 TAOK2Q9UL54 1235 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 A0A0G2JMZ2 1700 aa27.58■■■□□ 2.01
HOMER3-203ENST00000433218 GOLIM4O00461 696 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 GH2P01242 217 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 HLA-DOAP06340 250 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 MAP3K12Q12852 859 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 KIF1BPQ96EK5 621 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 TRIM34Q9BYJ4 488 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 TBC1D2Q9BYX2 928 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 RNF208Q9H0X6 261 aa27.58■■■□□ 2
HOMER3-203ENST00000433218 PLCD1P51178 756 aa27.57■■■□□ 2
HOMER3-203ENST00000433218 FOXP4Q8IVH2 680 aaPredicted RBP27.57■■■□□ 2
HOMER3-203ENST00000433218 TCRBV5S4A2TA0A5A2 114 aa27.56■■■□□ 2
HOMER3-203ENST00000433218 ZYXQ15942 572 aaKnown RBP27.56■■■□□ 2
HOMER3-203ENST00000433218 RPAP2Q8IXW5 612 aaPredicted RBP27.56■■■□□ 2
HOMER3-203ENST00000433218 ZNF532Q9HCE3 1301 aa27.55■■■□□ 2
HOMER3-203ENST00000433218 GJA8P48165 433 aa27.55■■■□□ 2
HOMER3-203ENST00000433218 HSP90AB4PQ58FF6 505 aa27.55■■■□□ 2
HOMER3-203ENST00000433218 UBE2Q1Q7Z7E8 422 aa27.55■■■□□ 2
HOMER3-203ENST00000433218 LCORLQ8N3X6 602 aa27.55■■■□□ 2
HOMER3-203ENST00000433218 P2RX7Q99572 595 aaKnown RBP27.55■■■□□ 2
HOMER3-203ENST00000433218 EMILIN3Q9NT22 766 aa27.55■■■□□ 2
HOMER3-203ENST00000433218 COL11A1P12107 1806 aaPredicted RBP27.55■■■□□ 2
HOMER3-203ENST00000433218 SHMT1P34896 483 aa27.54■■■□□ 2
HOMER3-203ENST00000433218 TRIM32Q13049 653 aa27.54■■■□□ 2
HOMER3-203ENST00000433218 SLC9C2Q5TAH2 1124 aa27.54■■■□□ 2
HOMER3-203ENST00000433218 TATDN1Q6P1N9 297 aa27.54■■■□□ 2
HOMER3-203ENST00000433218 CLASRPQ8N2M8 674 aaKnown RBP27.54■■■□□ 2
HOMER3-203ENST00000433218 SDR42E1Q8WUS8 393 aa27.54■■■□□ 2
HOMER3-203ENST00000433218 SERPINB13Q9UIV8 391 aa27.54■■■□□ 2
HOMER3-203ENST00000433218 MAGEB6P1A0A0J9YX57 407 aa27.53■■■□□ 2
HOMER3-203ENST00000433218 SMIM22K7EJ46 135 aa27.53■■■□□ 2
HOMER3-203ENST00000433218 IGSF3O75054 1194 aa27.53■■■□□ 2
HOMER3-203ENST00000433218 GJB1P08034 283 aa27.53■■■□□ 2
HOMER3-203ENST00000433218 IRF5Q13568 498 aa27.53■■■□□ 2
HOMER3-203ENST00000433218 USP17L10C9JJH3 530 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 SMARCA5O60264 1052 aaPredicted RBP27.52■■■□□ 2
HOMER3-203ENST00000433218 IFIT2P09913 472 aaKnown RBP27.52■■■□□ 2
HOMER3-203ENST00000433218 CYP2D6P10635 497 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 GCLCP48506 637 aaPredicted RBP27.52■■■□□ 2
HOMER3-203ENST00000433218 RRP1P56182 461 aaKnown RBP27.52■■■□□ 2
HOMER3-203ENST00000433218 HERVK_113P62684 666 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 UBXN2AP68543 259 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 IRX3P78415 501 aaPredicted RBP27.52■■■□□ 2
HOMER3-203ENST00000433218 ACER1Q8TDN7 264 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 U2AF1L4Q8WU68 220 aaKnown RBP27.52■■■□□ 2
HOMER3-203ENST00000433218 EHD4Q9H223 541 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 TMOD4Q9NZQ9 345 aa27.52■■■□□ 2
HOMER3-203ENST00000433218 HMMRO75330 724 aa27.51■■□□□ 1.99
HOMER3-203ENST00000433218 GUCY1A2P33402 732 aa27.51■■□□□ 1.99
HOMER3-203ENST00000433218 PABPC4Q13310 644 aaKnown RBP eCLIP27.51■■□□□ 1.99
HOMER3-203ENST00000433218 COA7Q96BR5 231 aa27.51■■□□□ 1.99
HOMER3-203ENST00000433218 BOLA2Q9H3K6 86 aa27.51■■□□□ 1.99
HOMER3-203ENST00000433218 MORF4L1Q9UBU8 362 aa27.51■■□□□ 1.99
HOMER3-203ENST00000433218 HOXA7P31268 230 aaPredicted RBP27.5■■□□□ 1.99
HOMER3-203ENST00000433218 SLC44A5Q8NCS7 719 aa27.5■■□□□ 1.99
HOMER3-203ENST00000433218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.5■■□□□ 1.99
HOMER3-203ENST00000433218 GJD2Q9UKL4 321 aa27.5■■□□□ 1.99
HOMER3-203ENST00000433218 GREB1LQ9C091 1923 aaPredicted RBP27.5■■□□□ 1.99
HOMER3-203ENST00000433218 H0YGN5 161 aa27.5■■□□□ 1.99
HOMER3-203ENST00000433218 RAB3GAP1Q15042 981 aa27.5■■□□□ 1.99
HOMER3-203ENST00000433218 PXYLP1Q8TE99 480 aa27.5■■□□□ 1.99
HOMER3-203ENST00000433218 ARMT1Q9H993 441 aa27.5■■□□□ 1.99
HOMER3-203ENST00000433218 PRKAB2O43741 272 aa27.49■■□□□ 1.99
HOMER3-203ENST00000433218 GABPAQ06546 454 aa27.49■■□□□ 1.99
HOMER3-203ENST00000433218 TTF1Q15361 905 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-203ENST00000433218 HABP4Q5JVS0 413 aaKnown RBP27.49■■□□□ 1.99
HOMER3-203ENST00000433218 PORCNQ9H237 461 aa27.49■■□□□ 1.99
HOMER3-203ENST00000433218 PAG1Q9NWQ8 432 aa27.49■■□□□ 1.99
HOMER3-203ENST00000433218 PDE3AQ14432 1141 aa27.48■■□□□ 1.99
HOMER3-203ENST00000433218 Q3C1V9 767 aa27.48■■□□□ 1.99
HOMER3-203ENST00000433218 CLEC10AQ8IUN9 316 aa27.48■■□□□ 1.99
HOMER3-203ENST00000433218 DEFB118Q96PH6 123 aa27.48■■□□□ 1.99
HOMER3-203ENST00000433218 PAGR1Q9BTK6 254 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms