RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
SSB-204ENST00000417292 SENP6Q9GZR1 1112 aaPredicted RBP17.03■□□□□ 0.32
SSB-204ENST00000417292 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
SSB-204ENST00000417292 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
SSB-204ENST00000417292 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
SSB-204ENST00000417292 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 TTC28Q96AY4 2481 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 UBTFL1P0CB47 393 aaPredicted RBP17.02■□□□□ 0.32
SSB-204ENST00000417292 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 ERVK-24P63145 666 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 APBA2Q99767 749 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 PRDM6Q9NQX0 595 aa17.02■□□□□ 0.32
SSB-204ENST00000417292 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
SSB-204ENST00000417292 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
SSB-204ENST00000417292 MAP4K4O95819 1239 aaPredicted RBP17.01■□□□□ 0.31
SSB-204ENST00000417292 PLEKHH3Q7Z736 793 aa17.01■□□□□ 0.31
SSB-204ENST00000417292 MIER1Q8N108 512 aa17.01■□□□□ 0.31
SSB-204ENST00000417292 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
SSB-204ENST00000417292 FLRT1Q9NZU1 646 aa17.01■□□□□ 0.31
SSB-204ENST00000417292 HMG20BQ9P0W2 317 aa17.01■□□□□ 0.31
SSB-204ENST00000417292 LTBP2Q14767 1821 aa17■□□□□ 0.31
SSB-204ENST00000417292 ASNSP08243 561 aa17■□□□□ 0.31
SSB-204ENST00000417292 ATN1P54259 1190 aaPredicted RBP17■□□□□ 0.31
SSB-204ENST00000417292 TEX11Q8IYF3 940 aa17■□□□□ 0.31
SSB-204ENST00000417292 MAFAQ8NHW3 353 aaPredicted RBP17■□□□□ 0.31
SSB-204ENST00000417292 SH3RF3Q8TEJ3 882 aaPredicted RBP17■□□□□ 0.31
SSB-204ENST00000417292 PAGR1Q9BTK6 254 aa17■□□□□ 0.31
SSB-204ENST00000417292 SEMA6BQ9H3T3 888 aa17■□□□□ 0.31
SSB-204ENST00000417292 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
SSB-204ENST00000417292 C19orf81C9J6K1 198 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 USP17L10C9JJH3 530 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 LDHCP07864 332 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 GSTO1P78417 241 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 TFCP2Q12800 502 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 MAP2K5Q13163 448 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
SSB-204ENST00000417292 SHHQ15465 462 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
SSB-204ENST00000417292 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
SSB-204ENST00000417292 GDF11O95390 407 aa16.98■□□□□ 0.31
SSB-204ENST00000417292 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
SSB-204ENST00000417292 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
SSB-204ENST00000417292 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
SSB-204ENST00000417292 TTYH1Q9H313 450 aaPredicted RBP16.98■□□□□ 0.31
SSB-204ENST00000417292 RAI14Q9P0K7 980 aa16.98■□□□□ 0.31
SSB-204ENST00000417292 DDX20Q9UHI6 824 aaKnown RBP16.98■□□□□ 0.31
SSB-204ENST00000417292 NDUFB9Q9Y6M9 179 aa16.98■□□□□ 0.31
SSB-204ENST00000417292 CNMDO75829 334 aa16.97■□□□□ 0.31
SSB-204ENST00000417292 RTP1P59025 263 aa16.97■□□□□ 0.31
SSB-204ENST00000417292 METTL16Q86W50 562 aaKnown RBP16.97■□□□□ 0.31
SSB-204ENST00000417292 MYLIPQ8WY64 445 aa16.97■□□□□ 0.31
SSB-204ENST00000417292 LPAR1Q92633 364 aa16.97■□□□□ 0.31
SSB-204ENST00000417292 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
SSB-204ENST00000417292 ZBTB21Q9ULJ3 1066 aa16.97■□□□□ 0.31
SSB-204ENST00000417292 DNM1LO00429 736 aa16.96■□□□□ 0.31
SSB-204ENST00000417292 MFSD14CQ5VZR4 134 aa16.96■□□□□ 0.31
SSB-204ENST00000417292 TRPV1Q8NER1 839 aa16.96■□□□□ 0.31
SSB-204ENST00000417292 GTF3C2Q8WUA4 911 aaPredicted RBP16.96■□□□□ 0.31
SSB-204ENST00000417292 NEUROD6Q96NK8 337 aa16.96■□□□□ 0.31
SSB-204ENST00000417292 PRKAG2Q9UGJ0 569 aa16.96■□□□□ 0.31
SSB-204ENST00000417292 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
SSB-204ENST00000417292 CNGA1P29973 690 aa16.95■□□□□ 0.3
SSB-204ENST00000417292 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
SSB-204ENST00000417292 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
SSB-204ENST00000417292 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
SSB-204ENST00000417292 ATP11BQ9Y2G3 1177 aa16.95■□□□□ 0.3
SSB-204ENST00000417292 RABGAP1Q9Y3P9 1069 aa16.95■□□□□ 0.3
SSB-204ENST00000417292 RLFQ13129 1914 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 MSCO60682 206 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 IGHA2P01877 340 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 PTPREP23469 700 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
SSB-204ENST00000417292 CYP2C19P33261 490 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 MCAMP43121 646 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 FOXP4Q8IVH2 680 aaPredicted RBP16.94■□□□□ 0.3
SSB-204ENST00000417292 NPLOC4Q8TAT6 608 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 MEIS3Q99687 375 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 CWC22Q9HCG8 908 aaKnown RBP16.94■□□□□ 0.3
SSB-204ENST00000417292 GINM1Q9NU53 330 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 FLT1P17948 1338 aa16.94■□□□□ 0.3
SSB-204ENST00000417292 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 SLC15A5A6NIM6 579 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 HOXC6P09630 235 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 ALDH1L2Q3SY69 923 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 GJC2Q5T442 439 aaPredicted RBP16.93■□□□□ 0.3
SSB-204ENST00000417292 WDR78Q5VTH9 848 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 SLC39A5Q6ZMH5 540 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 CRACR2BQ8N4Y2 399 aaPredicted RBP16.93■□□□□ 0.3
SSB-204ENST00000417292 BADQ92934 168 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 LRP2BPQ9P2M1 347 aa16.93■□□□□ 0.3
SSB-204ENST00000417292 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms