RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 A0A087WWV3 80 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 PRPF3O43395 683 aaKnown RBP19.35■□□□□ 0.69
NUP50-202ENST00000396096 PRDX5P30044 214 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 NFIXQ14938 502 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 DPCR1Q3MIW9 517 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 FAM182BQ5T319 152 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 C15orf52Q6ZUT6 534 aaKnown RBP19.35■□□□□ 0.69
NUP50-202ENST00000396096 TXNRD3Q86VQ6 643 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 AOPEPQ8N6M6 819 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 KRI1Q8N9T8 703 aaKnown RBP19.35■□□□□ 0.69
NUP50-202ENST00000396096 UBR3Q6ZT12 1888 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 TROAPQ12815 778 aa19.35■□□□□ 0.69
NUP50-202ENST00000396096 CHAF1AQ13111 956 aaPredicted RBP19.35■□□□□ 0.69
NUP50-202ENST00000396096 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.69
NUP50-202ENST00000396096 PKN1Q16512 942 aa19.34■□□□□ 0.69
NUP50-202ENST00000396096 CMTR1Q8N1G2 835 aaKnown RBP19.34■□□□□ 0.69
NUP50-202ENST00000396096 NRBP1Q9UHY1 535 aa19.34■□□□□ 0.69
NUP50-202ENST00000396096 XBP1P17861 261 aa19.33■□□□□ 0.69
NUP50-202ENST00000396096 PTPREP23469 700 aa19.33■□□□□ 0.69
NUP50-202ENST00000396096 AKAP17AQ02040 695 aaKnown RBP19.33■□□□□ 0.69
NUP50-202ENST00000396096 FAM196AQ6ZSG2 479 aa19.33■□□□□ 0.69
NUP50-202ENST00000396096 C17orf53Q8N3J3 647 aaPredicted RBP19.33■□□□□ 0.69
NUP50-202ENST00000396096 ZNF579Q8NAF0 562 aaKnown RBP19.33■□□□□ 0.69
NUP50-202ENST00000396096 WDR66Q8TBY9 1149 aa19.33■□□□□ 0.69
NUP50-202ENST00000396096 CLIC6Q96NY7 704 aa19.33■□□□□ 0.69
NUP50-202ENST00000396096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.33■□□□□ 0.68
NUP50-202ENST00000396096 CCDC82Q8N4S0 544 aa19.33■□□□□ 0.68
NUP50-202ENST00000396096 CNBD1Q8NA66 436 aa19.33■□□□□ 0.68
NUP50-202ENST00000396096 PHF20Q9BVI0 1012 aa19.33■□□□□ 0.68
NUP50-202ENST00000396096 FBXO2Q9UK22 296 aaPredicted RBP19.33■□□□□ 0.68
NUP50-202ENST00000396096 XDHP47989 1333 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 PRDM1O75626 825 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 TMTC3Q6ZXV5 915 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 SHISA4Q96DD7 197 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 PRIMPOLQ96LW4 560 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
NUP50-202ENST00000396096 KCNH3Q9ULD8 1083 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 CEP131Q9UPN4 1083 aa19.32■□□□□ 0.68
NUP50-202ENST00000396096 SMTNL1A8MU46 457 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 IKBKBO14920 756 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 NEMFO60524 1076 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 NR5A1Q13285 461 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 KRBA2Q6ZNG9 492 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 DZIP1Q86YF9 867 aaKnown RBP19.31■□□□□ 0.68
NUP50-202ENST00000396096 MKRN1Q9UHC7 482 aaKnown RBP19.31■□□□□ 0.68
NUP50-202ENST00000396096 NPHP1O15259 732 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 PDE4BQ07343 736 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 OXER1Q8TDS5 423 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
NUP50-202ENST00000396096 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 TAOK2Q9UL54 1235 aa19.31■□□□□ 0.68
NUP50-202ENST00000396096 ROBO3Q96MS0 1386 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 PLEKHA8P1O95397 391 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 NCAPHQ15003 741 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 DNTTIP2Q5QJE6 756 aaKnown RBP19.3■□□□□ 0.68
NUP50-202ENST00000396096 PRR5LQ6MZQ0 368 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 LRRC4BQ9NT99 713 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 PCDHB6Q9Y5E3 794 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 SRPRBQ9Y5M8 271 aaKnown RBP19.3■□□□□ 0.68
NUP50-202ENST00000396096 CNTNAP5Q8WYK1 1306 aa19.3■□□□□ 0.68
NUP50-202ENST00000396096 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
NUP50-202ENST00000396096 CYP2D6P10635 497 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 KRT2P35908 639 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 GSTO1P78417 241 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 LRMPQ12912 555 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 LONRF3Q496Y0 759 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 CRY2Q49AN0 593 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 ZNF804AQ7Z570 1209 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
NUP50-202ENST00000396096 CACTINQ8WUQ7 758 aaKnown RBP19.29■□□□□ 0.68
NUP50-202ENST00000396096 FAM13BQ9NYF5 915 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 NAV1Q8NEY1 1877 aa19.29■□□□□ 0.68
NUP50-202ENST00000396096 UQCRHLA0A096LP55 91 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 BIN1O00499 593 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 UQCRHP07919 91 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 PPP4CP60510 307 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 TPM4P67936 248 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 EVX2Q03828 476 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 VPS54Q9P1Q0 977 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 V9GY48 417 aaPredicted RBP19.28■□□□□ 0.68
NUP50-202ENST00000396096 AFF2P51816 1311 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 MDM2Q00987 491 aaPredicted RBP19.28■□□□□ 0.68
NUP50-202ENST00000396096 C12orf60Q5U649 245 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 LRRC8AQ8IWT6 810 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 SEPT12Q8IYM1 358 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 CNNM3Q8NE01 707 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 CTCFLQ8NI51 663 aaPredicted RBP19.28■□□□□ 0.68
NUP50-202ENST00000396096 ANKS1AQ92625 1134 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 FBXW7Q969H0 707 aa19.28■□□□□ 0.68
NUP50-202ENST00000396096 HOOK1Q9UJC3 728 aaKnown RBP19.28■□□□□ 0.68
NUP50-202ENST00000396096 PNOCQ13519 176 aa19.27■□□□□ 0.68
NUP50-202ENST00000396096 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
NUP50-202ENST00000396096 MYRIPQ8NFW9 859 aa19.27■□□□□ 0.68
NUP50-202ENST00000396096 TNFRSF25Q93038 417 aa19.27■□□□□ 0.68
NUP50-202ENST00000396096 CABP5Q9NP86 173 aa19.27■□□□□ 0.68
NUP50-202ENST00000396096 IMPACTQ9P2X3 320 aa19.27■□□□□ 0.68
NUP50-202ENST00000396096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
NUP50-202ENST00000396096 DYNC1I1O14576 645 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms