RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 IRX3P78415 501 aaPredicted RBP18.91■□□□□ 0.62
CHMP3-202ENST00000393773 NBPF3Q9H094 633 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 LRP2BPQ9P2M1 347 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 ZMYND8Q9ULU4 1186 aaPredicted RBP18.91■□□□□ 0.62
CHMP3-202ENST00000393773 PFASO15067 1338 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 A0A0G2JMZ2 1700 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 ZNF236Q9UL36 1845 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 GDF11O95390 407 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 GNAI2P04899 355 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 PRKAR2AP13861 404 aaKnown RBP18.9■□□□□ 0.62
CHMP3-202ENST00000393773 NAA16Q6N069 864 aaPredicted RBP18.9■□□□□ 0.62
CHMP3-202ENST00000393773 MAPKAPK5Q8IW41 473 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 SOCS4Q8WXH5 440 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
CHMP3-202ENST00000393773 C11orf49Q9H6J7 331 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 ZBTB21Q9ULJ3 1066 aa18.9■□□□□ 0.62
CHMP3-202ENST00000393773 PLCG2P16885 1265 aa18.89■□□□□ 0.61
CHMP3-202ENST00000393773 PPP4CP60510 307 aa18.89■□□□□ 0.61
CHMP3-202ENST00000393773 POTEEQ6S8J3 1075 aa18.89■□□□□ 0.61
CHMP3-202ENST00000393773 P2RX7Q99572 595 aaKnown RBP18.89■□□□□ 0.61
CHMP3-202ENST00000393773 SNRKQ9NRH2 765 aa18.89■□□□□ 0.61
CHMP3-202ENST00000393773 TMOD4Q9NZQ9 345 aa18.89■□□□□ 0.61
CHMP3-202ENST00000393773 MYH8P13535 1937 aa18.89■□□□□ 0.61
CHMP3-202ENST00000393773 CYP2E1P05181 493 aaPredicted RBP18.88■□□□□ 0.61
CHMP3-202ENST00000393773 XRCC5P13010 732 aaKnown RBP18.88■□□□□ 0.61
CHMP3-202ENST00000393773 CYP2B6P20813 491 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 G3BP1Q13283 466 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHMP3-202ENST00000393773 TNNI3KQ59H18 835 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 USP6NLQ92738 828 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 DBNDD2Q9BQY9 259 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 GPR108Q9NPR9 543 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 GINM1Q9NU53 330 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 FPGT-TNNI3KV9GXZ4 949 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 PARP14Q460N5 1801 aa18.88■□□□□ 0.61
CHMP3-202ENST00000393773 C19orf81C9J6K1 198 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 USP17L10C9JJH3 530 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 BAG3O95817 575 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 SYN1P17600 705 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 MAGEA10P43363 369 aaPredicted RBP18.87■□□□□ 0.61
CHMP3-202ENST00000393773 RLFQ13129 1914 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 POLA2Q14181 598 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 PORCNQ9H237 461 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 RBPJLQ9UBG7 517 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 PALD1Q9ULE6 856 aa18.87■□□□□ 0.61
CHMP3-202ENST00000393773 COL6A1P12109 1028 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
CHMP3-202ENST00000393773 MAPK4P31152 587 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 ERVK-9P63128 1117 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 ERVK-24P63145 666 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 TTC39AQ5SRH9 613 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 GPR153Q6NV75 609 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 CRACR2BQ8N4Y2 399 aaPredicted RBP18.86■□□□□ 0.61
CHMP3-202ENST00000393773 SLC17A8Q8NDX2 589 aa18.86■□□□□ 0.61
CHMP3-202ENST00000393773 CACNB2Q08289 660 aaPredicted RBP18.85■□□□□ 0.61
CHMP3-202ENST00000393773 LRIT3Q3SXY7 679 aa18.85■□□□□ 0.61
CHMP3-202ENST00000393773 MORN1Q5T089 497 aa18.85■□□□□ 0.61
CHMP3-202ENST00000393773 GPR142Q7Z601 462 aa18.85■□□□□ 0.61
CHMP3-202ENST00000393773 FOXP4Q8IVH2 680 aaPredicted RBP18.85■□□□□ 0.61
CHMP3-202ENST00000393773 GTF3C2Q8WUA4 911 aaPredicted RBP18.85■□□□□ 0.61
CHMP3-202ENST00000393773 ZNF512BQ96KM6 892 aaPredicted RBP18.85■□□□□ 0.61
CHMP3-202ENST00000393773 APBA2Q99767 749 aa18.85■□□□□ 0.61
CHMP3-202ENST00000393773 PIH1D3Q9NQM4 214 aaKnown RBP18.85■□□□□ 0.61
CHMP3-202ENST00000393773 EMILIN3Q9NT22 766 aa18.85■□□□□ 0.61
CHMP3-202ENST00000393773 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
CHMP3-202ENST00000393773 BCAR3O75815 825 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 CCL14Q16627 93 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 Q3C1V9 767 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 LHX8Q68G74 356 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 TRMT44Q8IYL2 757 aaKnown RBP18.84■□□□□ 0.61
CHMP3-202ENST00000393773 CLUAP1Q96AJ1 413 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 C12orf42Q96LP6 360 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 TRIM34Q9BYJ4 488 aa18.84■□□□□ 0.61
CHMP3-202ENST00000393773 SAP30BPQ9UHR5 308 aaKnown RBP18.84■□□□□ 0.61
CHMP3-202ENST00000393773 IGSF3O75054 1194 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 CCND3P30281 292 aaPredicted RBP18.83■□□□□ 0.6
CHMP3-202ENST00000393773 RGS2P41220 211 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 ZAP70P43403 619 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 DYNLL1P63167 89 aaKnown RBP18.83■□□□□ 0.6
CHMP3-202ENST00000393773 CCDC158Q5M9N0 1113 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 TDHQ8IZJ6 230 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 TMEM57Q8N5G2 664 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 SSH3Q8TE77 659 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 FRAT1Q92837 279 aaPredicted RBP18.83■□□□□ 0.6
CHMP3-202ENST00000393773 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
CHMP3-202ENST00000393773 DBNLQ9UJU6 430 aaKnown RBP18.83■□□□□ 0.6
CHMP3-202ENST00000393773 EYSQ5T1H1 3165 aa18.83■□□□□ 0.6
CHMP3-202ENST00000393773 DLL1O00548 723 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 CNMDO75829 334 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 GH2P01242 217 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 HLA-DOAP06340 250 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 Q7L0L9 218 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 PLEKHH3Q7Z736 793 aa18.82■□□□□ 0.6
CHMP3-202ENST00000393773 LRRC26Q2I0M4 334 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms