RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ZNF335Q9H4Z2 1342 aaPredicted RBP12.24□□□□□ -0.45
ABCF1-202ENST00000376545 FANCGO15287 622 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 NTSR2O95665 410 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 PPARAQ07869 468 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 FUT2Q10981 343 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 ZNF654Q8IZM8 581 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 MPHOSPH8Q99549 860 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 PCDHB6Q9Y5E3 794 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 ELF2Q15723 593 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 KANK3Q6NY19 840 aa12.24□□□□□ -0.45
ABCF1-202ENST00000376545 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 LAMB1P07942 1786 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 EXOC5O00471 708 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■■□□□ 12.8
ABCF1-202ENST00000376545 PKN1Q16512 942 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 CFAP100Q494V2 611 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 ADGRA1Q86SQ6 560 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.453e-9■■■■■ 44.4
ABCF1-202ENST00000376545 POLR2DO15514 142 aaKnown RBP12.23□□□□□ -0.45
ABCF1-202ENST00000376545 ARHGAP6O43182 974 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 TOP1P11387 765 aaKnown RBP12.23□□□□□ -0.45
ABCF1-202ENST00000376545 TDO2P48775 406 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 NR5A1Q13285 461 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
ABCF1-202ENST00000376545 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
ABCF1-202ENST00000376545 COL1A1P02452 1464 aaPredicted RBP12.23□□□□□ -0.45
ABCF1-202ENST00000376545 GABPB1Q06547 395 aaPredicted RBP12.22□□□□□ -0.45
ABCF1-202ENST00000376545 SPECC1Q5M775 1068 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 OXER1Q8TDS5 423 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 ZKSCAN3Q9BRR0 538 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 RIOK1Q9BRS2 568 aaKnown RBP12.22□□□□□ -0.45
ABCF1-202ENST00000376545 PHF20Q9BVI0 1012 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 BAZ2AQ9UIF9 1905 aaKnown RBP12.22□□□□□ -0.45
ABCF1-202ENST00000376545 ERICH2A1L162 156 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
ABCF1-202ENST00000376545 CHRNDQ07001 517 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 NR1I3Q14994 352 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 LRRN4CLQ8ND94 238 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 ZNF446Q9NWS9 450 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 KIAA1551Q9HCM1 1747 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 VWA3AA6NCI4 1184 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 STX10O60499 249 aa12.22□□□□□ -0.45
ABCF1-202ENST00000376545 APTXQ7Z2E3 356 aaKnown RBP12.22□□□□□ -0.45
ABCF1-202ENST00000376545 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.45
ABCF1-202ENST00000376545 IGHMBP2P38935 993 aaKnown RBP12.21□□□□□ -0.45
ABCF1-202ENST00000376545 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
ABCF1-202ENST00000376545 SMARCE1Q969G3 411 aa12.21□□□□□ -0.45
ABCF1-202ENST00000376545 SRRTQ9BXP5 876 aaKnown RBP12.21□□□□□ -0.45
ABCF1-202ENST00000376545 CSRNP2Q9H175 543 aa12.21□□□□□ -0.45
ABCF1-202ENST00000376545 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.21□□□□□ -0.45
ABCF1-202ENST00000376545 V9GYY5 206 aaPredicted RBP12.21□□□□□ -0.45
ABCF1-202ENST00000376545 ZSCAN12O43309 604 aa12.21□□□□□ -0.46
ABCF1-202ENST00000376545 KIF20AO95235 890 aa12.21□□□□□ -0.46
ABCF1-202ENST00000376545 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.46
ABCF1-202ENST00000376545 CRKLP46109 303 aaKnown RBP12.21□□□□□ -0.46
ABCF1-202ENST00000376545 PLCD1P51178 756 aa12.21□□□□□ -0.46
ABCF1-202ENST00000376545 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.46
ABCF1-202ENST00000376545 NFE2L3Q9Y4A8 694 aa12.21□□□□□ -0.46
ABCF1-202ENST00000376545 TNKSO95271 1327 aa12.21□□□□□ -0.46
ABCF1-202ENST00000376545 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 PLCD3Q8N3E9 789 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 ESR2Q92731 530 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 PPP2R2CQ9Y2T4 447 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 AHDC1Q5TGY3 1603 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 MAST2Q6P0Q8 1798 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 NPY5RQ15761 445 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 ERCC6LQ2NKX8 1250 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 USP49Q70CQ1 688 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 NUTM2AQ8IVF1 878 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 CMTR1Q8N1G2 835 aaKnown RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 ENAHQ8N8S7 591 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 MIGA1Q8NAN2 632 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 CDC5LQ99459 802 aaKnown RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 CABP5Q9NP86 173 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 LRP2BPQ9P2M1 347 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 MYH13Q9UKX3 1938 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 A0A087X0B3 334 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 GOLGA6L9A6NEM1 432 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 CYP7A1P22680 504 aa12.2□□□□□ -0.46
ABCF1-202ENST00000376545 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-202ENST00000376545 TAF1P21675 1872 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 PBX1P40424 430 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 TROAPQ12815 778 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 CUL4BQ13620 913 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
ABCF1-202ENST00000376545 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 SYTL4Q96C24 671 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms