RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 GTF3C2Q8WUA4 911 aaPredicted RBP19.46■□□□□ 0.71
COPE-202ENST00000349893 XAGE2Q96GT9 111 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 APBA2Q99767 749 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 GINM1Q9NU53 330 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 PI4KBQ9UBF8 816 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 LTBP2Q14767 1821 aa19.46■□□□□ 0.71
COPE-202ENST00000349893 ERVK-9P63128 1117 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 ERVK-24P63145 666 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 CCL14Q16627 93 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 Q3C1V9 767 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 ALDH1L2Q3SY69 923 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 GPR142Q7Z601 462 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 PORCNQ9H237 461 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 DHX36Q9H2U1 1008 aaKnown RBP19.45■□□□□ 0.7
COPE-202ENST00000349893 TMOD4Q9NZQ9 345 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 HMG20BQ9P0W2 317 aa19.45■□□□□ 0.7
COPE-202ENST00000349893 JAG1P78504 1218 aa19.44■□□□□ 0.7
COPE-202ENST00000349893 DNAJC18Q9H819 358 aa19.44■□□□□ 0.7
COPE-202ENST00000349893 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
COPE-202ENST00000349893 AKAP2Q9Y2D5 859 aa19.44■□□□□ 0.7
COPE-202ENST00000349893 PLEKHH3Q7Z736 793 aa19.43■□□□□ 0.7
COPE-202ENST00000349893 SPATA5Q8NB90 893 aa19.43■□□□□ 0.7
COPE-202ENST00000349893 LBHD1Q9BQE6 289 aaPredicted RBP19.43■□□□□ 0.7
COPE-202ENST00000349893 FOCADQ5VW36 1801 aa19.43■□□□□ 0.7
COPE-202ENST00000349893 USP17L10C9JJH3 530 aa19.42■□□□□ 0.7
COPE-202ENST00000349893 ARID4AP29374 1257 aaPredicted RBP19.42■□□□□ 0.7
COPE-202ENST00000349893 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
COPE-202ENST00000349893 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
COPE-202ENST00000349893 TEX11Q8IYF3 940 aa19.42■□□□□ 0.7
COPE-202ENST00000349893 CDK5RAP2Q96SN8 1893 aa19.41■□□□□ 0.7
COPE-202ENST00000349893 IGHA2P01877 340 aa19.41■□□□□ 0.7
COPE-202ENST00000349893 TFCP2Q12800 502 aa19.41■□□□□ 0.7
COPE-202ENST00000349893 MAP2K5Q13163 448 aa19.41■□□□□ 0.7
COPE-202ENST00000349893 SH3RF3Q8TEJ3 882 aaPredicted RBP19.41■□□□□ 0.7
COPE-202ENST00000349893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.41■□□□□ 0.7
COPE-202ENST00000349893 E9PSI1 815 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 MSCO60682 206 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 HOXC6P09630 235 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 MTX1Q13505 466 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 TBC1D9Q6ZT07 1266 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 FOXP4Q8IVH2 680 aaPredicted RBP19.4■□□□□ 0.7
COPE-202ENST00000349893 LPAR1Q92633 364 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 FAM161BQ96MY7 647 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 CDX2Q99626 313 aaPredicted RBP19.4■□□□□ 0.7
COPE-202ENST00000349893 SENP6Q9GZR1 1112 aaPredicted RBP19.4■□□□□ 0.7
COPE-202ENST00000349893 EMILIN3Q9NT22 766 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 RABGAP1Q9Y3P9 1069 aa19.4■□□□□ 0.7
COPE-202ENST00000349893 RLFQ13129 1914 aa19.39■□□□□ 0.7
COPE-202ENST00000349893 DNM1LO00429 736 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 CNMDO75829 334 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 PPP4CP60510 307 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 SHROOM1Q2M3G4 852 aaPredicted RBP19.39■□□□□ 0.69
COPE-202ENST00000349893 C12orf42Q96LP6 360 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 PRDM6Q9NQX0 595 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 FLRT1Q9NZU1 646 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 RAI14Q9P0K7 980 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 DDX20Q9UHI6 824 aaKnown RBP19.39■□□□□ 0.69
COPE-202ENST00000349893 ZBTB21Q9ULJ3 1066 aa19.39■□□□□ 0.69
COPE-202ENST00000349893 PLCG2P16885 1265 aa19.38■□□□□ 0.69
COPE-202ENST00000349893 MFSD14CQ5VZR4 134 aa19.38■□□□□ 0.69
COPE-202ENST00000349893 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
COPE-202ENST00000349893 EDC3Q96F86 508 aaKnown RBP19.38■□□□□ 0.69
COPE-202ENST00000349893 PAGR1Q9BTK6 254 aa19.38■□□□□ 0.69
COPE-202ENST00000349893 SEMA6BQ9H3T3 888 aa19.38■□□□□ 0.69
COPE-202ENST00000349893 FLT1P17948 1338 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 SLC15A5A6NIM6 579 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 ANP32CO43423 234 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 MCAMP43121 646 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 LBX2Q6XYB7 198 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 MAFAQ8NHW3 353 aaPredicted RBP19.37■□□□□ 0.69
COPE-202ENST00000349893 MEIS3Q99687 375 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 SMC4Q9NTJ3 1288 aa19.37■□□□□ 0.69
COPE-202ENST00000349893 GLRX3O76003 335 aaKnown RBP19.36■□□□□ 0.69
COPE-202ENST00000349893 BAG3O95817 575 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 PTPREP23469 700 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 RTP1P59025 263 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 CCNA1P78396 465 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 GRB14Q14449 540 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
COPE-202ENST00000349893 ZNF236Q9UL36 1845 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 SRGAP3O43295 1099 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 IGSF3O75054 1194 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 GDF11O95390 407 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 SMAD3P84022 425 aaKnown RBP19.35■□□□□ 0.69
COPE-202ENST00000349893 SNX17Q15036 470 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 SHHQ15465 462 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 NEUROD6Q96NK8 337 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 NOL10Q9BSC4 688 aaKnown RBP19.35■□□□□ 0.69
COPE-202ENST00000349893 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.69
COPE-202ENST00000349893 LRP2BPQ9P2M1 347 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 PRKAG2Q9UGJ0 569 aa19.35■□□□□ 0.69
COPE-202ENST00000349893 USP17L15C9J2P7 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L13C9JLJ4 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L11C9JVI0 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L18D6R9N7 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L22D6RA61 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L17D6RBQ6 530 aa19.34■□□□□ 0.69
COPE-202ENST00000349893 USP17L19D6RCP7 530 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms