RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 FKTNO75072 461 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 CHGBP05060 677 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 PLCD1P51178 756 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 DGKZQ13574 1117 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 ANKRD23Q86SG2 305 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 ARPP21Q9UBL0 812 aaPredicted RBP13.57□□□□□ -0.24
SLC28A1-202ENST00000338602 A0A0G2JLL6 359 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 PATL2C9JE40 543 aaKnown RBP13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 USP17L12C9JPN9 530 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 USP17L21D6R901 530 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 GDF11O95390 407 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 TDO2P48775 406 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 SPP2Q13103 211 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 CRHR2Q13324 411 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 ZMYM1Q5SVZ6 1142 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 PRRT2Q7Z6L0 340 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 WDR18Q9BV38 432 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
SLC28A1-202ENST00000338602 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 HIP1O00291 1037 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 PDHXO00330 501 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 GH2P01242 217 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 GABPAQ06546 454 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 ARHGEF6Q15052 776 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 C12orf60Q5U649 245 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 ZNF296Q8WUU4 475 aaPredicted RBP13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 ZNF287Q9HBT7 754 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
SLC28A1-202ENST00000338602 LAMB1P07942 1786 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 GSG1L2A8MUP6 293 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 M0R2C6 588 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 SHMT1P34896 483 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 SBK1Q52WX2 424 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 CTR9Q6PD62 1173 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 ERO1AQ96HE7 468 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 PARK7Q99497 189 aaKnown RBP13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 SLC45A1Q9Y2W3 748 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 NAV1Q8NEY1 1877 aa13.54□□□□□ -0.24
SLC28A1-202ENST00000338602 MINDY4BA8MYZ0 360 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 USP17L10C9JJH3 530 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 TLR2O60603 784 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 SLC3A2P08195 630 aaKnown RBP13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 CYP2D6P10635 497 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 SP3Q02447 781 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 MCMDC2Q4G0Z9 681 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 IFNL3Q8IZI9 196 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 SEC62Q99442 399 aaKnown RBP13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 FEZ1Q99689 392 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 NAPBQ9H115 298 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 MKNK2Q9HBH9 465 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 AGTPBP1Q9UPW5 1226 aa13.53□□□□□ -0.24
SLC28A1-202ENST00000338602 CDK8P49336 464 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 HMGCS2P54868 508 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 SOX10P56693 466 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 BACE1P56817 501 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 KIF22Q14807 665 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 PKN2Q16513 984 aaKnown RBP13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 SH3D19Q5HYK7 790 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 C16orf86Q6ZW13 317 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 CENPQQ7L2Z9 268 aaPredicted RBP13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 CTU1Q7Z7A3 348 aaKnown RBP13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 R3HDMLQ9H3Y0 253 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.25
SLC28A1-202ENST00000338602 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 CYP2D7A0A087X1C5 515 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 SDSP20132 328 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 OSBPP22059 807 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 USP14P54578 494 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 MTMR2Q13614 643 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 MOGSQ13724 837 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 GPAT2Q6NUI2 795 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
SLC28A1-202ENST00000338602 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
SLC28A1-202ENST00000338602 PDE4AP27815 886 aa13.5□□□□□ -0.25
SLC28A1-202ENST00000338602 JAG1P78504 1218 aa13.5□□□□□ -0.25
SLC28A1-202ENST00000338602 NMIQ13287 307 aaPredicted RBP13.5□□□□□ -0.25
SLC28A1-202ENST00000338602 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
SLC28A1-202ENST00000338602 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms