RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 USP17L4A6NCW7 530 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 RAD17O75943 681 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 TDO2P48775 406 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 NOLC1Q14978 699 aaKnown RBP eCLIP16.42■□□□□ 0.22
VRK3-201ENST00000316763 SF3A1Q15459 793 aaKnown RBP16.42■□□□□ 0.22
VRK3-201ENST00000316763 STX1AQ16623 288 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 USP17L1Q7RTZ2 530 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 CERS3Q8IU89 383 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 KCNG4Q8TDN1 519 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
VRK3-201ENST00000316763 FTOQ9C0B1 505 aaKnown RBP eCLIP16.42■□□□□ 0.22
VRK3-201ENST00000316763 GAKO14976 1311 aa16.42■□□□□ 0.22
VRK3-201ENST00000316763 A0A1W2PQ27 194 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 A0A1W2PQ64 194 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 A0A1W2PQD8 194 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 FZD9O00144 591 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 YEATS4O95619 227 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
VRK3-201ENST00000316763 CXCL9Q07325 125 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 STK38Q15208 465 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 DNTTIP2Q5QJE6 756 aaKnown RBP16.41■□□□□ 0.22
VRK3-201ENST00000316763 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 ADALQ6DHV7 355 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.41■□□□□ 0.22
VRK3-201ENST00000316763 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 MRPS27Q92552 414 aaKnown RBP16.41■□□□□ 0.22
VRK3-201ENST00000316763 MXD3Q9BW11 206 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 DNAJC25Q9H1X3 360 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 ATP8A2Q9NTI2 1148 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 ANAPC4Q9UJX5 808 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 GPR75-ASB3A0A0A6YYF3 556 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
VRK3-201ENST00000316763 BAG3O95817 575 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
VRK3-201ENST00000316763 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
VRK3-201ENST00000316763 DCP1AQ9NPI6 582 aaPredicted RBP16.41■□□□□ 0.22
VRK3-201ENST00000316763 TIAM2Q8IVF5 1701 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 GOLGA6L19H0YKK7 550 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 PSMD14O00487 310 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 SNW1Q13573 536 aaKnown RBP16.4■□□□□ 0.22
VRK3-201ENST00000316763 DACT2Q5SW24 774 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 ENGASEQ8NFI3 743 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 TRIM5Q9C035 493 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 POLR3EQ9NVU0 708 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
VRK3-201ENST00000316763 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
VRK3-201ENST00000316763 EIF6P56537 245 aaKnown RBP16.39■□□□□ 0.21
VRK3-201ENST00000316763 PPARAQ07869 468 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 DRC7Q8IY82 874 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 LINC00301Q8NCQ3 95 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 ANO10Q9NW15 660 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 TACC3Q9Y6A5 838 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 B4E1Z4 1266 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
VRK3-201ENST00000316763 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 CIAPIN1Q6FI81 312 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 CTR9Q6PD62 1173 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
VRK3-201ENST00000316763 NEDD4P46934 1319 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 SPTLC2O15270 562 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 POLR3DP05423 398 aaPredicted RBP16.38■□□□□ 0.21
VRK3-201ENST00000316763 BTDP43251 543 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 ZNF75DP51815 510 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 CTDSPL2Q05D32 466 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 PLA2G4DQ86XP0 818 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
VRK3-201ENST00000316763 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
VRK3-201ENST00000316763 KRT23Q9C075 422 aa16.38■□□□□ 0.21
VRK3-201ENST00000316763 ZBTB43O43298 467 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 PLCG2P16885 1265 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 TNIP1Q15025 636 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 TMEM67Q5HYA8 995 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 MRIQ9BWK5 157 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 DAGLAQ9Y4D2 1042 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 USP17L12C9JPN9 530 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 USP17L21D6R901 530 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 UQCRHP07919 91 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 FGRP09769 529 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 LIFRP42702 1097 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 RHBDL3P58872 404 aa16.37■□□□□ 0.21
VRK3-201ENST00000316763 KIF23Q02241 960 aaPredicted RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
VRK3-201ENST00000316763 MFSD6Q6ZSS7 791 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms