RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Psmc4P54775 418 aa18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Ppm1jQ149T7 507 aa18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Trim56Q80VI1 734 aaKnown RBP18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Dpp8Q80YA7 892 aa18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Slc18a1Q8R090 521 aa18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 C1qtnf12Q8R2Z0 308 aa18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Znhit2Q9QY66 399 aa18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Pdcd6ipQ9WU78 869 aaKnown RBP18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Zc3h4Q6ZPZ3 1304 aaKnown RBP18.39■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Gm43951A0A0N4SUT6 962 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Nck2O55033 380 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Cyp2d10P24456 504 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Sp8Q8BMJ8 486 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Amer2Q8CCJ4 672 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Rnf208Q8K0W3 265 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Nek9Q8K1R7 984 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Ces1dQ8VCT4 565 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Bmp2kQ91Z96 1138 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Leng1Q9DB98 261 aa18.38■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Mfap1aC0HKD8 439 aaKnown RBP18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Mfap1bC0HKD9 439 aaKnown RBP18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Rexo5D3YW29 759 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Fads2p1Q0VAX3 487 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Olfr118Q7TRJ6 321 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 AidaQ8C4Q6 305 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Calhm4Q8CE93 315 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Prkag2Q91WG5 566 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Tdrd1Q99MV1 1172 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Katnbl1Q9CWJ3 299 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Zgrf1Q0VGT4 1863 aa18.37■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Nf2P46662 596 aa18.36■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Fxr1Q61584 677 aaKnown RBP18.36■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 GorabQ8BRM2 368 aa18.36■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Fam155aQ8CCS2 467 aa18.36■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Eid1Q9DCR4 169 aa18.36■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 SmapQ9R0P4 181 aaKnown RBP18.36■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Disp2Q8CIP5 1345 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 MccE9PWI3 1003 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 ArxO35085 564 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Igfbp4P47879 254 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Acap3Q6NXL5 833 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Ttc12Q8BW49 704 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Srgap1Q91Z69 1062 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Traf7Q922B6 594 aa18.35■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Gm13128L7MU96 475 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 DaxxO35613 739 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Mdm2P23804 489 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Eya3P97480 510 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Aak1Q3UHJ0 959 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Spata5Q3UMC0 893 aaKnown RBP18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Eme2Q56A04 373 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Bri3bpQ8BXV2 253 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Col26a1Q91VF6 440 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Klrc1Q9Z202 244 aa18.34■□□□□ 0.53
Hmgb1-208ENSMUST00000139443 Mb21d2Q8C525 428 aa18.33■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Kcnq3Q8K3F6 873 aa18.33■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Atl3Q91YH5 541 aa18.33■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 PhaxQ9JJT9 385 aaKnown RBP18.33■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Trim5E9PV98 497 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 OgdhlE9Q7L0 1029 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Fgfr2P21803 821 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Sox10Q04888 466 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Cep131Q62036 1060 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Sp4Q62445 782 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Fndc3bQ6NWW9 1207 aaKnown RBP18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Fam205cQ80YD3 371 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Nup133Q8R0G9 1155 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Ndufv1Q91YT0 464 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Prkab1Q9R078 270 aa18.32■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Slc1a4O35874 532 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 MecomP14404 1042 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Wdr70Q3TWF6 657 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Ccdc84Q4VA36 332 aaKnown RBP18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Defb15Q8R2I5 79 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 IrgqQ8VIM9 583 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Tmod4Q9JLH8 345 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Sbf1Q6ZPE2 1867 aa18.31■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Atp8b3Q6UQ17 1335 aa18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Brd1E9PZ26 1189 aaKnown RBP18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Morf4l1P60762 362 aa18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 WaplQ65Z40 1200 aaKnown RBP18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Supt20hQ7TT00 530 aaKnown RBP18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Scfd1Q8BRF7 639 aaKnown RBP18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Sgpl1Q8R0X7 568 aa18.3■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Hoxc10P31257 342 aa18.29■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 CalcaP70160 136 aa18.29■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 PrkczQ02956 592 aa18.29■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Alx1Q8C8B0 326 aa18.29■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Dppa3Q8QZY3 150 aa18.29■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 MyrflQ3UN70 904 aa18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Btg1-ps1Q3V0S2 161 aa18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Btg1-ps2Q3V0X0 161 aa18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Nek11Q8C0Q4 628 aa18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 RestQ8VIG1 1082 aa18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Bap1Q99PU7 728 aa18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Akap8Q9DBR0 687 aaKnown RBP18.28■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Gm36210A0A1B0GS00 229 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Flot1O08917 428 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Sema3fO88632 785 aa18.27■□□□□ 0.52
Hmgb1-208ENSMUST00000139443 Pde11aP0C1Q2 933 aa18.27■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms