RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 4932429P05RikA2ADI4 785 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Epn1Q80VP1 575 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ccdc73Q8CDM4 1066 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Baiap2l1Q9DBJ3 514 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Kif23E9Q5G3 953 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 GpiP06745 558 aaKnown RBP19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 SarsP26638 512 aaKnown RBP19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Pth1rP41593 591 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Pip4k2bQ80XI4 416 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Usp27Q8CEG8 438 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Mfap3Q922T2 349 aa19.15■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Myh8P13542 1937 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Metap2O08663 478 aaKnown RBP19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 MybP06876 636 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Lrrc4bP0C192 709 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Wnt7aP24383 349 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Ankrd40Q5SUE8 363 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Fkbp5Q64378 456 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 SyncQ9EPM5 470 aa19.14■□□□□ 0.66
Ctcf-201ENSMUST00000005841 Kiaa1468Q148V7 1216 aa19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Prpf4bQ61136 1007 aaKnown RBP19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ltv1Q6NSQ7 470 aaKnown RBP19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Acap3Q6NXL5 833 aa19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Pcdhb9E9Q5G2 828 aa19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Sco1Q5SUC9 284 aa19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Vps53Q8CCB4 832 aa19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Znf609Q8BZ47 1413 aa19.14■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Tpp1O89023 562 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 4930550L24RikQ99PA7 320 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 TefQ9JLC6 301 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Dnajc7Q9QYI3 494 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Tmem232Q5K6N0 675 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ift88Q61371 824 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Rbm12b2Q66JV4 834 aaKnown RBP19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Csrnp2Q8BGQ2 534 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Bpifb6Q8BU51 449 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Lrrc42Q8R2U7 421 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 RpainQ9CWY9 219 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Cnbd1B1AWM0 430 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Il27raO70394 623 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Fam89aQ14BJ1 175 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Q8C5C9 218 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 BlmhQ8R016 455 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Cnot6lQ8VEG6 555 aa19.13■□□□□ 0.65
Ctcf-201ENSMUST00000005841 PurbO35295 324 aaKnown RBP19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Uchl5Q9WUP7 329 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ampd3O08739 766 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Gsdma2Q32M21 443 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Tns3Q5SSZ5 1440 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Leng8Q8CBY3 785 aaKnown RBP19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Fam217aQ9D9W6 419 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Gm43738A0A0G2JEA5 862 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Asic4Q7TNS7 539 aa19.12■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Phlpp1Q8CHE4 1687 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Cdkl5Q3UTQ8 938 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Gga3Q8BMI3 718 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 AopepQ8BXQ6 817 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Setdb2Q8C267 713 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Lztr1Q9CQ33 837 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ubap1lG3UW59 384 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Smarcc1P97496 1104 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Prdm1Q60636 856 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 TsksO54887 585 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 AppP12023 770 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Chp1P61022 195 aa19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Znhit6Q3UFB2 460 aaKnown RBP19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Tax1bp1Q3UKC1 814 aaKnown RBP19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Mrps25Q9D125 171 aaKnown RBP19.11■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Tcp11Q01755 566 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ppp1r7Q3UM45 361 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ncoa5Q91W39 579 aaKnown RBP19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Tex11Q14AT2 947 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Lamb3Q61087 1168 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Irak1Q62406 710 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 PpanQ91YU8 470 aaKnown RBP19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Trim11Q99PQ2 467 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Gm6588E9Q3K0 461 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Psmb7P70195 277 aa19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Pes1Q9EQ61 584 aaKnown RBP19.1■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Pnpla6Q3TRM4 1355 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Psen1P49769 467 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Cnnm1Q0GA42 951 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 PnocQ64387 187 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Nap1l1P28656 391 aaKnown RBP19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 DymQ8CHY3 669 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Emilin1Q99K41 1017 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Mkrn1Q9QXP6 481 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Pdcd6ipQ9WU78 869 aaKnown RBP19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Dnajc21E9Q8D0 531 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Flt3Q00342 1000 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Osbpl1aQ91XL9 950 aa19.09■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Zswim4Q8C7B8 1101 aa19.08■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Ube3bQ9ES34 1070 aa19.08■□□□□ 0.65
Ctcf-201ENSMUST00000005841 Pla2g4aP47713 748 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Slc44a1Q6X893 653 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cep128Q8BI22 1102 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Hps6Q8BLY7 805 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Eif3cQ8R1B4 911 aaKnown RBP19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Snx12O70493 165 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Stim2P83093 746 aa19.08■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 262.5 ms