RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 Krtap29-1A2A5X4 342 aa5.42□□□□□ -1.54
Ttc28-206ENSMUST00000156290 2310050C09RikG5E8Z3 280 aa5.41□□□□□ -1.54
Ttc28-206ENSMUST00000156290 Gm2696A0A1W2P709 240 aa5.41□□□□□ -1.54
Ttc28-206ENSMUST00000156290 Prm2P07978 107 aa5.41□□□□□ -1.54
Ttc28-206ENSMUST00000156290 Celsr2Q9R0M0 2920 aa5.4□□□□□ -1.54
Ttc28-206ENSMUST00000156290 Krtap14O08640 167 aa5.4□□□□□ -1.55
Ttc28-206ENSMUST00000156290 NbeaQ9EPN1 2936 aa5.39□□□□□ -1.55
Ttc28-206ENSMUST00000156290 Gm19426M0QWC7 77 aa5.38□□□□□ -1.55
Ttc28-206ENSMUST00000156290 BC029722A0A0N4SW31 51 aa5.36□□□□□ -1.55
Ttc28-206ENSMUST00000156290 Celsr3Q91ZI0 3301 aa5.36□□□□□ -1.55
Ttc28-206ENSMUST00000156290 Dmxl2Q8BPN8 3032 aa5.35□□□□□ -1.55
Ttc28-206ENSMUST00000156290 Lama1P19137 3084 aa5.33□□□□□ -1.56
Ttc28-206ENSMUST00000156290 LrbaQ9ESE1 2856 aa5.33□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Adgrg4B7ZCC9 3073 aa5.32□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Tenm4Q3UHK6 2771 aa5.31□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Gm5767A0A0J9YTU8 78 aa5.3□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Wdfy4E9Q2M9 3149 aa5.29□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Col6a3E9PWQ3 3284 aa5.29□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Dchs2A0A0A6YW72 3346 aa5.29□□□□□ -1.56
Ttc28-206ENSMUST00000156290 Brca2P97929 3329 aa5.28□□□□□ -1.56
Ttc28-206ENSMUST00000156290 D6Ertd527eA0A0N4SWI3 464 aa5.28□□□□□ -1.56
Ttc28-206ENSMUST00000156290 2310061N02RikQ9D6S9 174 aa5.26□□□□□ -1.57
Ttc28-206ENSMUST00000156290 VcanQ62059 3357 aa5.2□□□□□ -1.58
Ttc28-206ENSMUST00000156290 Tnp2P11378 117 aa5.2□□□□□ -1.58
Ttc28-206ENSMUST00000156290 Trank1Q8BV79 2999 aa5.19□□□□□ -1.58
Ttc28-206ENSMUST00000156290 Tnp1P10856 55 aa5.17□□□□□ -1.58
Ttc28-206ENSMUST00000156290 Gm20537G3UYK7 97 aa5.15□□□□□ -1.58
Ttc28-206ENSMUST00000156290 Helz2E9QAM5 2947 aaKnown RBP5.14□□□□□ -1.59
Ttc28-206ENSMUST00000156290 Zfhx3Q61329 3726 aa5.12□□□□□ -1.59
Ttc28-206ENSMUST00000156290 Megf8P60882 2789 aa5.12□□□□□ -1.59
Ttc28-206ENSMUST00000156290 2310057N15RikQ9D6T8 200 aa5.11□□□□□ -1.59
Ttc28-206ENSMUST00000156290 Dchs1E9PVD3 3291 aa5.07□□□□□ -1.6
Ttc28-206ENSMUST00000156290 A930033H14RikG5E8X6 103 aa5.06□□□□□ -1.6
Ttc28-206ENSMUST00000156290 SpegQ62407 3262 aa5.06□□□□□ -1.6
Ttc28-206ENSMUST00000156290 Gm5965D3Z724 196 aa5.05□□□□□ -1.6
Ttc28-206ENSMUST00000156290 OtogO55225 2910 aa5.05□□□□□ -1.6
Ttc28-206ENSMUST00000156290 2310079G19RikQ9D6L6 185 aa5.02□□□□□ -1.61
Ttc28-206ENSMUST00000156290 VwfQ8CIZ8 2813 aa5.01□□□□□ -1.61
Ttc28-206ENSMUST00000156290 Myo15aQ9QZZ4 3511 aa5.01□□□□□ -1.61
Ttc28-206ENSMUST00000156290 RelnQ60841 3461 aa4.99□□□□□ -1.61
Ttc28-206ENSMUST00000156290 Tenm2Q9WTS5 2764 aa4.99□□□□□ -1.61
Ttc28-206ENSMUST00000156290 Gm17416Q30KP4 66 aa4.96□□□□□ -1.62
Ttc28-206ENSMUST00000156290 B930094E09RikQ8C4T2 136 aa4.96□□□□□ -1.62
Ttc28-206ENSMUST00000156290 Gm17402F6Z0L5 76 aa4.94□□□□□ -1.62
Ttc28-206ENSMUST00000156290 Gm9736A0A1W2P7N1 277 aa4.93□□□□□ -1.62
Ttc28-206ENSMUST00000156290 Wdfy3Q6VNB8 3508 aa4.91□□□□□ -1.62
Ttc28-206ENSMUST00000156290 Vps13cQ8BX70 3748 aa4.89□□□□□ -1.63
Ttc28-206ENSMUST00000156290 Akap9Q70FJ1 3797 aa4.88□□□□□ -1.63
Ttc28-206ENSMUST00000156290 Fbn1Q61554 2873 aaKnown RBP4.86□□□□□ -1.63
Ttc28-206ENSMUST00000156290 Muc5acE9QAQ8 3455 aa4.86□□□□□ -1.63
Ttc28-206ENSMUST00000156290 DmdP11531 3678 aa4.83□□□□□ -1.64
Ttc28-206ENSMUST00000156290 Ank2Q8C8R3 3898 aa4.8□□□□□ -1.64
Ttc28-206ENSMUST00000156290 Gm10318A0A1W2P728 225 aa4.79□□□□□ -1.64
Ttc28-206ENSMUST00000156290 Col7a1Q63870 2944 aa4.71□□□□□ -1.65
Ttc28-206ENSMUST00000156290 Smg1Q8BKX6 3658 aaKnown RBP4.67□□□□□ -1.66
Ttc28-206ENSMUST00000156290 Gm9918Q8BUR5 174 aa4.67□□□□□ -1.66
Ttc28-206ENSMUST00000156290 Csmd1Q923L3 3564 aa4.67□□□□□ -1.66
Ttc28-206ENSMUST00000156290 Lama5Q61001 3718 aa4.66□□□□□ -1.66
Ttc28-206ENSMUST00000156290 2210017I01RikA0A0A6YVV1 95 aa4.66□□□□□ -1.66
Ttc28-206ENSMUST00000156290 Muc6Q80T03 2850 aa4.66□□□□□ -1.66
Ttc28-206ENSMUST00000156290 Crct1Q6PAI5 102 aa4.64□□□□□ -1.67
Ttc28-206ENSMUST00000156290 4933428G20RikQ9D3X4 101 aa4.59□□□□□ -1.67
Ttc28-206ENSMUST00000156290 Zfhx4Q9JJN2 3550 aa4.58□□□□□ -1.68
Ttc28-206ENSMUST00000156290 SpenQ62504 3644 aaKnown RBP4.54□□□□□ -1.68
Ttc28-206ENSMUST00000156290 Krtap19-5O08632 62 aa4.49□□□□□ -1.69
Ttc28-206ENSMUST00000156290 BsnO88737 3942 aa4.41□□□□□ -1.7
Ttc28-206ENSMUST00000156290 Cmya5Q70KF4 3739 aa4.4□□□□□ -1.7
Ttc28-206ENSMUST00000156290 Krtap3-2Q9D638 99 aa4.4□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Krtap3-3Q9D7P0 99 aa4.4□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Svep1A2AVA0 3567 aa4.39□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Gm884A2A9H6 3643 aa4.37□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Gm19668J3QMD1 248 aa4.37□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Muc4Q8JZM8 3443 aa4.34□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Krtap13-1Q8K198 168 aa4.34□□□□□ -1.71
Ttc28-206ENSMUST00000156290 Gm11939A2A592 99 aa4.34□□□□□ -1.72
Ttc28-206ENSMUST00000156290 Csmd2V9GX34 3611 aa4.33□□□□□ -1.72
Ttc28-206ENSMUST00000156290 Krtap7-1Q9D3I6 87 aa4.31□□□□□ -1.72
Ttc28-206ENSMUST00000156290 Krtap3-1A2A591 98 aa4.28□□□□□ -1.72
Ttc28-206ENSMUST00000156290 Gm18596A0A1W2P860 280 aa4.18□□□□□ -1.74
Ttc28-206ENSMUST00000156290 LystP97412 3788 aa4.15□□□□□ -1.75
Ttc28-206ENSMUST00000156290 Dnah3Q8BW94 4083 aa4.14□□□□□ -1.75
Ttc28-206ENSMUST00000156290 Dnah14A0A140LIJ4 4489 aa4.13□□□□□ -1.75
Ttc28-206ENSMUST00000156290 Dnah7bL7N1Y0 4068 aa4.11□□□□□ -1.75
Ttc28-206ENSMUST00000156290 Huwe1Q7TMY8 4377 aaKnown RBP4.09□□□□□ -1.75
Ttc28-206ENSMUST00000156290 LorP18165 486 aa4.08□□□□□ -1.76
Ttc28-206ENSMUST00000156290 Sprr2a3Q4KL71 83 aa4.08□□□□□ -1.76
Ttc28-206ENSMUST00000156290 Sprr2a1Q9CQK8 83 aa4.08□□□□□ -1.76
Ttc28-206ENSMUST00000156290 Xirp2Q4U4S6 3784 aa4.07□□□□□ -1.76
Ttc28-206ENSMUST00000156290 Dnah10D3YYQ8 4591 aa4.07□□□□□ -1.76
Ttc28-206ENSMUST00000156290 Gm6358A0A087WPH4 74 aa4.04□□□□□ -1.76
Ttc28-206ENSMUST00000156290 Krtap1-5A2A590 122 aa3.99□□□□□ -1.77
Ttc28-206ENSMUST00000156290 CubnQ9JLB4 3623 aa3.98□□□□□ -1.77
Ttc28-206ENSMUST00000156290 Gm19402J3QJV4 266 aa3.98□□□□□ -1.77
Ttc28-206ENSMUST00000156290 Dnah5Q8VHE6 4621 aa3.96□□□□□ -1.77
Ttc28-206ENSMUST00000156290 Csmd3Q80T79 3707 aa3.96□□□□□ -1.78
Ttc28-206ENSMUST00000156290 Dnah7cA0A087WR13 4024 aa3.94□□□□□ -1.78
Ttc28-206ENSMUST00000156290 Dnah7aE9Q0T8 4024 aa3.93□□□□□ -1.78
Ttc28-206ENSMUST00000156290 Hspg2Q05793 3707 aaKnown RBP3.91□□□□□ -1.78
Ttc28-206ENSMUST00000156290 Vps13dB1ART2 4390 aa3.91□□□□□ -1.78
Ttc28-206ENSMUST00000156290 PlecQ9QXS1 4691 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 156.4 ms