RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Tnrc18Q80WC3 2878 aa10.01□□□□□ -0.81
Sort1-203ENSMUST00000135636 Itpr2Q9Z329 2701 aa10.01□□□□□ -0.81
Sort1-203ENSMUST00000135636 Igfn1Q3KNY0 2849 aa10□□□□□ -0.81
Sort1-203ENSMUST00000135636 Wdfy3Q6VNB8 3508 aa10□□□□□ -0.81
Sort1-203ENSMUST00000135636 Kmt2bO08550 2713 aa9.94□□□□□ -0.82
Sort1-203ENSMUST00000135636 Akap9Q70FJ1 3797 aa9.92□□□□□ -0.82
Sort1-203ENSMUST00000135636 Utp20Q5XG71 2788 aaKnown RBP9.9□□□□□ -0.82
Sort1-203ENSMUST00000135636 Dmxl2Q8BPN8 3032 aa9.84□□□□□ -0.83
Sort1-203ENSMUST00000135636 4933415A04RikQ9D443 101 aa9.83□□□□□ -0.84
Sort1-203ENSMUST00000135636 Tnp1P10856 55 aa9.82□□□□□ -0.84
Sort1-203ENSMUST00000135636 Tenm4Q3UHK6 2771 aa9.8□□□□□ -0.84
Sort1-203ENSMUST00000135636 Muc2Q80Z19 2680 aa9.75□□□□□ -0.85
Sort1-203ENSMUST00000135636 Pkd1l1Q8R526 2615 aa9.75□□□□□ -0.85
Sort1-203ENSMUST00000135636 NbeaQ9EPN1 2936 aa9.73□□□□□ -0.85
Sort1-203ENSMUST00000135636 Stab2Q8R4U0 2559 aa9.71□□□□□ -0.86
Sort1-203ENSMUST00000135636 Smg1Q8BKX6 3658 aaKnown RBP9.7□□□□□ -0.86
Sort1-203ENSMUST00000135636 Crct1Q6PAI5 102 aa9.69□□□□□ -0.86
Sort1-203ENSMUST00000135636 Col6a5A6H584 2640 aa9.63□□□□□ -0.87
Sort1-203ENSMUST00000135636 RelnQ60841 3461 aa9.61□□□□□ -0.87
Sort1-203ENSMUST00000135636 Prm2P07978 107 aa9.6□□□□□ -0.87
Sort1-203ENSMUST00000135636 ApcQ61315 2845 aa9.59□□□□□ -0.87
Sort1-203ENSMUST00000135636 Ndufaf8A2AMZ4 74 aa9.58□□□□□ -0.88
Sort1-203ENSMUST00000135636 DmdP11531 3678 aa9.56□□□□□ -0.88
Sort1-203ENSMUST00000135636 Csmd1Q923L3 3564 aa9.54□□□□□ -0.88
Sort1-203ENSMUST00000135636 Srrm2Q8BTI8 2703 aaKnown RBP9.52□□□□□ -0.88
Sort1-203ENSMUST00000135636 FcgbpE9Q0B5 2583 aa9.52□□□□□ -0.89
Sort1-203ENSMUST00000135636 Zzef1Q5SSH7 2924 aa9.51□□□□□ -0.89
Sort1-203ENSMUST00000135636 Hivep1Q03172 2688 aa9.5□□□□□ -0.89
Sort1-203ENSMUST00000135636 Muc5acE9QAQ8 3455 aa9.46□□□□□ -0.89
Sort1-203ENSMUST00000135636 1700042G07RikB1AUF7 90 aa9.42□□□□□ -0.9
Sort1-203ENSMUST00000135636 DspE9Q557 2883 aaKnown RBP9.38□□□□□ -0.91
Sort1-203ENSMUST00000135636 Zfhx4Q9JJN2 3550 aa9.36□□□□□ -0.91
Sort1-203ENSMUST00000135636 B930094E09RikQ8C4T2 136 aa9.34□□□□□ -0.91
Sort1-203ENSMUST00000135636 Lama5Q61001 3718 aa9.33□□□□□ -0.92
Sort1-203ENSMUST00000135636 Tex15F8VPN2 2785 aa9.32□□□□□ -0.92
Sort1-203ENSMUST00000135636 Gm20537G3UYK7 97 aa9.27□□□□□ -0.92
Sort1-203ENSMUST00000135636 LrbaQ9ESE1 2856 aa9.26□□□□□ -0.93
Sort1-203ENSMUST00000135636 TgO08710 2766 aa9.24□□□□□ -0.93
Sort1-203ENSMUST00000135636 Tenm2Q9WTS5 2764 aa9.23□□□□□ -0.93
Sort1-203ENSMUST00000135636 Trank1Q8BV79 2999 aa9.23□□□□□ -0.93
Sort1-203ENSMUST00000135636 4933428G20RikQ9D3X4 101 aa9.19□□□□□ -0.94
Sort1-203ENSMUST00000135636 SpenQ62504 3644 aaKnown RBP9.18□□□□□ -0.94
Sort1-203ENSMUST00000135636 Nf1Q04690 2841 aa9.16□□□□□ -0.94
Sort1-203ENSMUST00000135636 Gm9112A2AI92 75 aa9.16□□□□□ -0.94
Sort1-203ENSMUST00000135636 Gm884A2A9H6 3643 aa9.16□□□□□ -0.94
Sort1-203ENSMUST00000135636 Celsr2Q9R0M0 2920 aa9.15□□□□□ -0.94
Sort1-203ENSMUST00000135636 Chd9Q8BYH8 2885 aa9.14□□□□□ -0.95
Sort1-203ENSMUST00000135636 Cmya5Q70KF4 3739 aa9.11□□□□□ -0.95
Sort1-203ENSMUST00000135636 FlncQ8VHX6 2726 aaKnown RBP9.09□□□□□ -0.96
Sort1-203ENSMUST00000135636 Pdzd2E9Q1M1 2796 aa9.08□□□□□ -0.96
Sort1-203ENSMUST00000135636 Krtap19-5O08632 62 aa9.06□□□□□ -0.96
Sort1-203ENSMUST00000135636 Csmd2V9GX34 3611 aa9.05□□□□□ -0.96
Sort1-203ENSMUST00000135636 2310079G19RikQ9D6L6 185 aa9.04□□□□□ -0.96
Sort1-203ENSMUST00000135636 Gm40193A0A1B0GT39 78 aa9.03□□□□□ -0.96
Sort1-203ENSMUST00000135636 Tenm1Q9WTS4 2731 aa9.02□□□□□ -0.97
Sort1-203ENSMUST00000135636 OtogO55225 2910 aa8.96□□□□□ -0.98
Sort1-203ENSMUST00000135636 Gm18596A0A1W2P860 280 aa8.93□□□□□ -0.98
Sort1-203ENSMUST00000135636 Tenm3Q9WTS6 2715 aa8.92□□□□□ -0.98
Sort1-203ENSMUST00000135636 Gm6358A0A087WPH4 74 aa8.91□□□□□ -0.98
Sort1-203ENSMUST00000135636 Gm19668J3QMD1 248 aa8.89□□□□□ -0.99
Sort1-203ENSMUST00000135636 Gm17416Q30KP4 66 aa8.87□□□□□ -0.99
Sort1-203ENSMUST00000135636 Svep1A2AVA0 3567 aa8.85□□□□□ -0.99
Sort1-203ENSMUST00000135636 Ank2Q8C8R3 3898 aa8.84□□□□□ -0.99
Sort1-203ENSMUST00000135636 2210017I01RikA0A0A6YVV1 95 aa8.83□□□□□ -1
Sort1-203ENSMUST00000135636 Sprr2kO70562 68 aa8.82□□□□□ -1
Sort1-203ENSMUST00000135636 Krtap13-1Q8K198 168 aa8.77□□□□□ -1.01
Sort1-203ENSMUST00000135636 SmcpP15265 143 aa8.69□□□□□ -1.02
Sort1-203ENSMUST00000135636 Huwe1Q7TMY8 4377 aaKnown RBP8.63□□□□□ -1.03
Sort1-203ENSMUST00000135636 VwfQ8CIZ8 2813 aa8.54□□□□□ -1.04
Sort1-203ENSMUST00000135636 Gm11939A2A592 99 aa8.48□□□□□ -1.05
Sort1-203ENSMUST00000135636 Helz2E9QAM5 2947 aaKnown RBP8.46□□□□□ -1.05
Sort1-203ENSMUST00000135636 LorP18165 486 aa8.46□□□□□ -1.06
Sort1-203ENSMUST00000135636 Gm17402F6Z0L5 76 aa8.46□□□□□ -1.06
Sort1-203ENSMUST00000135636 Muc4Q8JZM8 3443 aa8.46□□□□□ -1.06
Sort1-203ENSMUST00000135636 Gm19402J3QJV4 266 aa8.45□□□□□ -1.06
Sort1-203ENSMUST00000135636 Col7a1Q63870 2944 aa8.42□□□□□ -1.06
Sort1-203ENSMUST00000135636 Krtap8-1O08633 61 aa8.42□□□□□ -1.06
Sort1-203ENSMUST00000135636 Fbn1Q61554 2873 aaKnown RBP8.42□□□□□ -1.06
Sort1-203ENSMUST00000135636 Megf8P60882 2789 aa8.37□□□□□ -1.07
Sort1-203ENSMUST00000135636 LystP97412 3788 aa8.33□□□□□ -1.08
Sort1-203ENSMUST00000135636 Dnah14A0A140LIJ4 4489 aa8.26□□□□□ -1.09
Sort1-203ENSMUST00000135636 Sprr2gO70558 76 aa8.26□□□□□ -1.09
Sort1-203ENSMUST00000135636 CubnQ9JLB4 3623 aa8.22□□□□□ -1.09
Sort1-203ENSMUST00000135636 Hspg2Q05793 3707 aaKnown RBP8.22□□□□□ -1.09
Sort1-203ENSMUST00000135636 BsnO88737 3942 aa8.21□□□□□ -1.09
Sort1-203ENSMUST00000135636 Krtap3-1A2A591 98 aa8.17□□□□□ -1.1
Sort1-203ENSMUST00000135636 Csmd3Q80T79 3707 aa8.14□□□□□ -1.11
Sort1-203ENSMUST00000135636 Krtap7-1Q9D3I6 87 aa8.06□□□□□ -1.12
Sort1-203ENSMUST00000135636 Krtap19-9aF8WH65 55 aa8.03□□□□□ -1.12
Sort1-203ENSMUST00000135636 Dnah10D3YYQ8 4591 aa7.9□□□□□ -1.14
Sort1-203ENSMUST00000135636 Lce1mQ9CR91 182 aa7.84□□□□□ -1.15
Sort1-203ENSMUST00000135636 Muc6Q80T03 2850 aa7.84□□□□□ -1.15
Sort1-203ENSMUST00000135636 Xirp2Q4U4S6 3784 aa7.83□□□□□ -1.16
Sort1-203ENSMUST00000135636 Krtap3-2Q9D638 99 aa7.78□□□□□ -1.16
Sort1-203ENSMUST00000135636 Krtap3-3Q9D7P0 99 aa7.78□□□□□ -1.16
Sort1-203ENSMUST00000135636 Krtap1-5A2A590 122 aa7.75□□□□□ -1.17
Sort1-203ENSMUST00000135636 Krtap1-4Q3V2D6 188 aa7.75□□□□□ -1.17
Sort1-203ENSMUST00000135636 2310046K23RikA0A0A6YVW6 87 aa7.73□□□□□ -1.17
Sort1-203ENSMUST00000135636 Gm38119A0A0A6YX29 146 aa7.6□□□□□ -1.19
Sort1-203ENSMUST00000135636 Krtap12-1Q9Z287 130 aa7.58□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms