RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Krtap10-10A0A1W2P7T6 217 aa9.15□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Trank1Q8BV79 2999 aa9.14□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Itpr3P70227 2670 aa9.14□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Zzef1Q5SSH7 2924 aa9.14□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Tnp2P11378 117 aa9.13□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Wdfy3Q6VNB8 3508 aa9.13□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Tex15F8VPN2 2785 aa9.1□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Nbeal2Q6ZQA0 2742 aa9.09□□□□□ -0.95
Ubr3-202ENSMUST00000112251 Tnrc18Q80WC3 2878 aa9.03□□□□□ -0.96
Ubr3-202ENSMUST00000112251 Prm2P07978 107 aa9.01□□□□□ -0.97
Ubr3-202ENSMUST00000112251 Srrm2Q8BTI8 2703 aaKnown RBP8.97□□□□□ -0.97
Ubr3-202ENSMUST00000112251 Celsr1O35161 3034 aa8.96□□□□□ -0.98
Ubr3-202ENSMUST00000112251 Fbn2Q61555 2907 aa8.95□□□□□ -0.98
Ubr3-202ENSMUST00000112251 Dchs1E9PVD3 3291 aa8.94□□□□□ -0.98
Ubr3-202ENSMUST00000112251 LrbaQ9ESE1 2856 aa8.92□□□□□ -0.98
Ubr3-202ENSMUST00000112251 RelnQ60841 3461 aa8.92□□□□□ -0.98
Ubr3-202ENSMUST00000112251 Col6a5A6H584 2640 aa8.92□□□□□ -0.98
Ubr3-202ENSMUST00000112251 Itpr1P11881 2749 aa8.91□□□□□ -0.98
Ubr3-202ENSMUST00000112251 Cmya5Q70KF4 3739 aa8.9□□□□□ -0.98
Ubr3-202ENSMUST00000112251 Gm20537G3UYK7 97 aa8.89□□□□□ -0.99
Ubr3-202ENSMUST00000112251 Csmd1Q923L3 3564 aa8.88□□□□□ -0.99
Ubr3-202ENSMUST00000112251 B930094E09RikQ8C4T2 136 aa8.87□□□□□ -0.99
Ubr3-202ENSMUST00000112251 Gm2696A0A1W2P709 240 aa8.86□□□□□ -0.99
Ubr3-202ENSMUST00000112251 Gm9918Q8BUR5 174 aa8.84□□□□□ -0.99
Ubr3-202ENSMUST00000112251 Gm11565A2A4M7 156 aa8.84□□□□□ -0.99
Ubr3-202ENSMUST00000112251 DmdP11531 3678 aa8.82□□□□□ -1
Ubr3-202ENSMUST00000112251 NbeaQ9EPN1 2936 aa8.81□□□□□ -1
Ubr3-202ENSMUST00000112251 Vps13cQ8BX70 3748 aa8.8□□□□□ -1
Ubr3-202ENSMUST00000112251 4933428G20RikQ9D3X4 101 aa8.75□□□□□ -1.01
Ubr3-202ENSMUST00000112251 Adgrg4B7ZCC9 3073 aa8.75□□□□□ -1.01
Ubr3-202ENSMUST00000112251 2310061N02RikQ9D6S9 174 aa8.72□□□□□ -1.01
Ubr3-202ENSMUST00000112251 SpenQ62504 3644 aaKnown RBP8.71□□□□□ -1.02
Ubr3-202ENSMUST00000112251 Nf1Q04690 2841 aa8.67□□□□□ -1.02
Ubr3-202ENSMUST00000112251 Smg1Q8BKX6 3658 aaKnown RBP8.63□□□□□ -1.03
Ubr3-202ENSMUST00000112251 Tenm3Q9WTS6 2715 aa8.61□□□□□ -1.03
Ubr3-202ENSMUST00000112251 A930033H14RikG5E8X6 103 aa8.61□□□□□ -1.03
Ubr3-202ENSMUST00000112251 Zfhx4Q9JJN2 3550 aa8.59□□□□□ -1.03
Ubr3-202ENSMUST00000112251 FcgbpE9Q0B5 2583 aa8.55□□□□□ -1.04
Ubr3-202ENSMUST00000112251 TgO08710 2766 aa8.54□□□□□ -1.04
Ubr3-202ENSMUST00000112251 Tenm1Q9WTS4 2731 aa8.49□□□□□ -1.05
Ubr3-202ENSMUST00000112251 Hivep1Q03172 2688 aa8.48□□□□□ -1.05
Ubr3-202ENSMUST00000112251 Igfn1Q3KNY0 2849 aa8.48□□□□□ -1.05
Ubr3-202ENSMUST00000112251 Muc2Q80Z19 2680 aa8.46□□□□□ -1.06
Ubr3-202ENSMUST00000112251 FlncQ8VHX6 2726 aaKnown RBP8.42□□□□□ -1.06
Ubr3-202ENSMUST00000112251 Gm884A2A9H6 3643 aa8.42□□□□□ -1.06
Ubr3-202ENSMUST00000112251 Celsr2Q9R0M0 2920 aa8.38□□□□□ -1.07
Ubr3-202ENSMUST00000112251 Csmd2V9GX34 3611 aa8.31□□□□□ -1.08
Ubr3-202ENSMUST00000112251 Pdzd2E9Q1M1 2796 aa8.3□□□□□ -1.08
Ubr3-202ENSMUST00000112251 Muc5acE9QAQ8 3455 aa8.27□□□□□ -1.09
Ubr3-202ENSMUST00000112251 Lama5Q61001 3718 aa8.25□□□□□ -1.09
Ubr3-202ENSMUST00000112251 Gm19668J3QMD1 248 aa8.2□□□□□ -1.1
Ubr3-202ENSMUST00000112251 2310079G19RikQ9D6L6 185 aa8.13□□□□□ -1.11
Ubr3-202ENSMUST00000112251 Gm17402F6Z0L5 76 aa8.13□□□□□ -1.11
Ubr3-202ENSMUST00000112251 Gm9736A0A1W2P7N1 277 aa8.12□□□□□ -1.11
Ubr3-202ENSMUST00000112251 Gm10318A0A1W2P728 225 aa8.11□□□□□ -1.11
Ubr3-202ENSMUST00000112251 Ank2Q8C8R3 3898 aa8.08□□□□□ -1.12
Ubr3-202ENSMUST00000112251 Tenm4Q3UHK6 2771 aa8.07□□□□□ -1.12
Ubr3-202ENSMUST00000112251 OtogO55225 2910 aa8.06□□□□□ -1.12
Ubr3-202ENSMUST00000112251 Megf8P60882 2789 aa8.05□□□□□ -1.12
Ubr3-202ENSMUST00000112251 Helz2E9QAM5 2947 aaKnown RBP8.02□□□□□ -1.13
Ubr3-202ENSMUST00000112251 Gm17416Q30KP4 66 aa7.99□□□□□ -1.13
Ubr3-202ENSMUST00000112251 VwfQ8CIZ8 2813 aa7.99□□□□□ -1.13
Ubr3-202ENSMUST00000112251 Gm6358A0A087WPH4 74 aa7.97□□□□□ -1.13
Ubr3-202ENSMUST00000112251 2210017I01RikA0A0A6YVV1 95 aa7.94□□□□□ -1.14
Ubr3-202ENSMUST00000112251 Fbn1Q61554 2873 aaKnown RBP7.86□□□□□ -1.15
Ubr3-202ENSMUST00000112251 Tenm2Q9WTS5 2764 aa7.83□□□□□ -1.16
Ubr3-202ENSMUST00000112251 Csmd3Q80T79 3707 aa7.8□□□□□ -1.16
Ubr3-202ENSMUST00000112251 LystP97412 3788 aa7.79□□□□□ -1.16
Ubr3-202ENSMUST00000112251 Crct1Q6PAI5 102 aa7.79□□□□□ -1.16
Ubr3-202ENSMUST00000112251 Gm18596A0A1W2P860 280 aa7.73□□□□□ -1.17
Ubr3-202ENSMUST00000112251 CubnQ9JLB4 3623 aa7.69□□□□□ -1.18
Ubr3-202ENSMUST00000112251 Hspg2Q05793 3707 aaKnown RBP7.65□□□□□ -1.18
Ubr3-202ENSMUST00000112251 Xirp2Q4U4S6 3784 aa7.63□□□□□ -1.19
Ubr3-202ENSMUST00000112251 Krtap13-1Q8K198 168 aa7.58□□□□□ -1.2
Ubr3-202ENSMUST00000112251 Gm19402J3QJV4 266 aa7.52□□□□□ -1.21
Ubr3-202ENSMUST00000112251 Muc4Q8JZM8 3443 aa7.51□□□□□ -1.21
Ubr3-202ENSMUST00000112251 Col7a1Q63870 2944 aa7.51□□□□□ -1.21
Ubr3-202ENSMUST00000112251 Sprr2kO70562 68 aa7.48□□□□□ -1.21
Ubr3-202ENSMUST00000112251 Svep1A2AVA0 3567 aa7.47□□□□□ -1.21
Ubr3-202ENSMUST00000112251 BsnO88737 3942 aa7.45□□□□□ -1.22
Ubr3-202ENSMUST00000112251 Muc6Q80T03 2850 aa7.38□□□□□ -1.23
Ubr3-202ENSMUST00000112251 Gm11939A2A592 99 aa7.34□□□□□ -1.23
Ubr3-202ENSMUST00000112251 Krtap7-1Q9D3I6 87 aa7.32□□□□□ -1.24
Ubr3-202ENSMUST00000112251 Krtap8-1O08633 61 aa7.28□□□□□ -1.24
Ubr3-202ENSMUST00000112251 Krtap3-1A2A591 98 aa7.21□□□□□ -1.26
Ubr3-202ENSMUST00000112251 Vps13bQ80TY5 3993 aa7.18□□□□□ -1.26
Ubr3-202ENSMUST00000112251 Krtap19-5O08632 62 aa7.16□□□□□ -1.26
Ubr3-202ENSMUST00000112251 Sprr2gO70558 76 aa7.11□□□□□ -1.27
Ubr3-202ENSMUST00000112251 Krtap19-9aF8WH65 55 aa7.01□□□□□ -1.29
Ubr3-202ENSMUST00000112251 Krtap3-2Q9D638 99 aa6.91□□□□□ -1.3
Ubr3-202ENSMUST00000112251 Krtap3-3Q9D7P0 99 aa6.91□□□□□ -1.3
Ubr3-202ENSMUST00000112251 Krtap12-1Q9Z287 130 aa6.89□□□□□ -1.31
Ubr3-202ENSMUST00000112251 Krtap19-9bQ99NG9 58 aa6.85□□□□□ -1.31
Ubr3-202ENSMUST00000112251 Sprr2a3Q4KL71 83 aa6.76□□□□□ -1.33
Ubr3-202ENSMUST00000112251 Sprr2a1Q9CQK8 83 aa6.76□□□□□ -1.33
Ubr3-202ENSMUST00000112251 Dnah3Q8BW94 4083 aa6.71□□□□□ -1.34
Ubr3-202ENSMUST00000112251 Huwe1Q7TMY8 4377 aaKnown RBP6.67□□□□□ -1.34
Ubr3-202ENSMUST00000112251 Lce3bQ9CQM7 98 aa6.65□□□□□ -1.34
Ubr3-202ENSMUST00000112251 Krtap1-5A2A590 122 aa6.65□□□□□ -1.35
Ubr3-202ENSMUST00000112251 Dnah6E9Q0B6 4144 aa6.63□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms