RNA–Protein interactions for RNA: ENSMUST00000089520.2

Shroom4-201, Transcript of Protein Shroom4, mousemouse

TSL 1 (best) BASIC

Gene Shroom4, Length 8,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4-201ENSMUST00000089520 TgO08710 2766 aa3.37□□□□□ -1.87
Shroom4-201ENSMUST00000089520 1700042G07RikB1AUF7 90 aa3.37□□□□□ -1.87
Shroom4-201ENSMUST00000089520 Lrrc37aB1AWG4 3215 aa3.36□□□□□ -1.87
Shroom4-201ENSMUST00000089520 DmdP11531 3678 aa3.36□□□□□ -1.87
Shroom4-201ENSMUST00000089520 Gm17402F6Z0L5 76 aa3.36□□□□□ -1.87
Shroom4-201ENSMUST00000089520 Frem2Q6NVD0 3160 aa3.36□□□□□ -1.87
Shroom4-201ENSMUST00000089520 VcanQ62059 3357 aa3.35□□□□□ -1.87
Shroom4-201ENSMUST00000089520 Nf1Q04690 2841 aa3.35□□□□□ -1.87
Shroom4-201ENSMUST00000089520 Wdfy4E9Q2M9 3149 aa3.35□□□□□ -1.87
Shroom4-201ENSMUST00000089520 B930094E09RikQ8C4T2 136 aa3.34□□□□□ -1.87
Shroom4-201ENSMUST00000089520 Tenm1Q9WTS4 2731 aa3.34□□□□□ -1.87
Shroom4-201ENSMUST00000089520 SmcpP15265 143 aa3.32□□□□□ -1.88
Shroom4-201ENSMUST00000089520 Myo15aQ9QZZ4 3511 aa3.32□□□□□ -1.88
Shroom4-201ENSMUST00000089520 NbeaQ9EPN1 2936 aa3.32□□□□□ -1.88
Shroom4-201ENSMUST00000089520 2210017I01RikA0A0A6YVV1 95 aa3.29□□□□□ -1.88
Shroom4-201ENSMUST00000089520 FryE9Q8I9 3020 aa3.29□□□□□ -1.88
Shroom4-201ENSMUST00000089520 BptfA2A654 3036 aaKnown RBP3.28□□□□□ -1.88
Shroom4-201ENSMUST00000089520 Cfap54Q8C6S9 3106 aa3.27□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Megf8P60882 2789 aa3.27□□□□□ -1.89
Shroom4-201ENSMUST00000089520 4933428G20RikQ9D3X4 101 aa3.27□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Prm2P07978 107 aa3.27□□□□□ -1.89
Shroom4-201ENSMUST00000089520 AspmQ8CJ27 3122 aa3.27□□□□□ -1.89
Shroom4-201ENSMUST00000089520 AtmQ62388 3066 aa3.27□□□□□ -1.89
Shroom4-201ENSMUST00000089520 FrylF8VQ05 3007 aa3.26□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Gm20537G3UYK7 97 aa3.26□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Zzef1Q5SSH7 2924 aa3.25□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Ranbp2Q9ERU9 3053 aaKnown RBP3.25□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Celsr1O35161 3034 aa3.24□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Trank1Q8BV79 2999 aa3.24□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Gm9112A2AI92 75 aa3.22□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Tenm3Q9WTS6 2715 aa3.22□□□□□ -1.89
Shroom4-201ENSMUST00000089520 Dmxl2Q8BPN8 3032 aa3.21□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Chd9Q8BYH8 2885 aa3.21□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Lama1P19137 3084 aa3.19□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Celsr3Q91ZI0 3301 aa3.18□□□□□ -1.9
Shroom4-201ENSMUST00000089520 DspE9Q557 2883 aaKnown RBP3.17□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Gm19668J3QMD1 248 aa3.17□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Adgrg4B7ZCC9 3073 aa3.17□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Vps13cQ8BX70 3748 aa3.16□□□□□ -1.9
Shroom4-201ENSMUST00000089520 2310079G19RikQ9D6L6 185 aa3.16□□□□□ -1.9
Shroom4-201ENSMUST00000089520 Tenm2Q9WTS5 2764 aa3.14□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Dchs1E9PVD3 3291 aa3.14□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Gm884A2A9H6 3643 aa3.14□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Gm9736A0A1W2P7N1 277 aa3.13□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Gm9918Q8BUR5 174 aa3.12□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Celsr2Q9R0M0 2920 aa3.12□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Dchs2A0A0A6YW72 3346 aa3.11□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Muc5acE9QAQ8 3455 aa3.11□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Zfhx4Q9JJN2 3550 aa3.1□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Akap9Q70FJ1 3797 aa3.1□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Krtap19-5O08632 62 aa3.09□□□□□ -1.91
Shroom4-201ENSMUST00000089520 Zfhx3Q61329 3726 aa3.09□□□□□ -1.91
Shroom4-201ENSMUST00000089520 LrbaQ9ESE1 2856 aa3.07□□□□□ -1.92
Shroom4-201ENSMUST00000089520 RelnQ60841 3461 aa3.07□□□□□ -1.92
Shroom4-201ENSMUST00000089520 SpenQ62504 3644 aaKnown RBP3.06□□□□□ -1.92
Shroom4-201ENSMUST00000089520 Krtap13-1Q8K198 168 aa3.02□□□□□ -1.93
Shroom4-201ENSMUST00000089520 Lama5Q61001 3718 aa3.02□□□□□ -1.93
Shroom4-201ENSMUST00000089520 Ank2Q8C8R3 3898 aa3.02□□□□□ -1.93
Shroom4-201ENSMUST00000089520 Sprr2kO70562 68 aa2.99□□□□□ -1.93
Shroom4-201ENSMUST00000089520 VwfQ8CIZ8 2813 aa2.98□□□□□ -1.93
Shroom4-201ENSMUST00000089520 Gm11939A2A592 99 aa2.97□□□□□ -1.93
Shroom4-201ENSMUST00000089520 Krtap8-1O08633 61 aa2.97□□□□□ -1.93
Shroom4-201ENSMUST00000089520 OtogO55225 2910 aa2.96□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Smg1Q8BKX6 3658 aaKnown RBP2.95□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Csmd1Q923L3 3564 aa2.94□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Crct1Q6PAI5 102 aa2.93□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Sprr2gO70558 76 aa2.93□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Helz2E9QAM5 2947 aaKnown RBP2.92□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Gm18596A0A1W2P860 280 aa2.9□□□□□ -1.94
Shroom4-201ENSMUST00000089520 Svep1A2AVA0 3567 aa2.89□□□□□ -1.95
Shroom4-201ENSMUST00000089520 Gm10318A0A1W2P728 225 aa2.89□□□□□ -1.95
Shroom4-201ENSMUST00000089520 Cmya5Q70KF4 3739 aa2.89□□□□□ -1.95
Shroom4-201ENSMUST00000089520 Gm6358A0A087WPH4 74 aa2.88□□□□□ -1.95
Shroom4-201ENSMUST00000089520 Krtap19-9aF8WH65 55 aa2.88□□□□□ -1.95
Shroom4-201ENSMUST00000089520 Krtap3-1A2A591 98 aa2.86□□□□□ -1.95
Shroom4-201ENSMUST00000089520 Huwe1Q7TMY8 4377 aaKnown RBP2.83□□□□□ -1.96
Shroom4-201ENSMUST00000089520 Krtap1-5A2A590 122 aa2.82□□□□□ -1.96
Shroom4-201ENSMUST00000089520 Col7a1Q63870 2944 aa2.81□□□□□ -1.96
Shroom4-201ENSMUST00000089520 CubnQ9JLB4 3623 aa2.8□□□□□ -1.96
Shroom4-201ENSMUST00000089520 Csmd2V9GX34 3611 aa2.79□□□□□ -1.96
Shroom4-201ENSMUST00000089520 BsnO88737 3942 aa2.77□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Krtap19-9bQ99NG9 58 aa2.77□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Krtap7-1Q9D3I6 87 aa2.76□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Muc6Q80T03 2850 aa2.76□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Krtap3-2Q9D638 99 aa2.75□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Krtap3-3Q9D7P0 99 aa2.75□□□□□ -1.97
Shroom4-201ENSMUST00000089520 LystP97412 3788 aa2.75□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Gm19402J3QJV4 266 aa2.74□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Sprr2a3Q4KL71 83 aa2.73□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Sprr2a1Q9CQK8 83 aa2.73□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Krtap1-4Q3V2D6 188 aa2.72□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Muc4Q8JZM8 3443 aa2.72□□□□□ -1.97
Shroom4-201ENSMUST00000089520 Fbn1Q61554 2873 aaKnown RBP2.71□□□□□ -1.98
Shroom4-201ENSMUST00000089520 LorP18165 486 aa2.7□□□□□ -1.98
Shroom4-201ENSMUST00000089520 2310046K23RikA0A0A6YVW6 87 aa2.66□□□□□ -1.98
Shroom4-201ENSMUST00000089520 Lce1mQ9CR91 182 aa2.66□□□□□ -1.98
Shroom4-201ENSMUST00000089520 Krtap12-1Q9Z287 130 aa2.66□□□□□ -1.98
Shroom4-201ENSMUST00000089520 Xirp2Q4U4S6 3784 aa2.63□□□□□ -1.99
Shroom4-201ENSMUST00000089520 Dnah3Q8BW94 4083 aa2.62□□□□□ -1.99
Shroom4-201ENSMUST00000089520 Lce3bQ9CQM7 98 aa2.61□□□□□ -1.99
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms