RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Pkd1l1Q8R526 2615 aa8.85□□□□□ -0.99
Col17a1-202ENSMUST00000086923 Tnp1P10856 55 aa8.84□□□□□ -0.99
Col17a1-202ENSMUST00000086923 Celsr1O35161 3034 aa8.8□□□□□ -1
Col17a1-202ENSMUST00000086923 FryE9Q8I9 3020 aa8.8□□□□□ -1
Col17a1-202ENSMUST00000086923 2310079G19RikQ9D6L6 185 aa8.78□□□□□ -1
Col17a1-202ENSMUST00000086923 Igfn1Q3KNY0 2849 aa8.77□□□□□ -1.01
Col17a1-202ENSMUST00000086923 Srrm2Q8BTI8 2703 aaKnown RBP8.76□□□□□ -1.01
Col17a1-202ENSMUST00000086923 VcanQ62059 3357 aa8.76□□□□□ -1.01
Col17a1-202ENSMUST00000086923 Dmxl2Q8BPN8 3032 aa8.75□□□□□ -1.01
Col17a1-202ENSMUST00000086923 NbeaQ9EPN1 2936 aa8.75□□□□□ -1.01
Col17a1-202ENSMUST00000086923 Hivep1Q03172 2688 aa8.72□□□□□ -1.01
Col17a1-202ENSMUST00000086923 B930094E09RikQ8C4T2 136 aa8.71□□□□□ -1.01
Col17a1-202ENSMUST00000086923 A930033H14RikG5E8X6 103 aa8.69□□□□□ -1.02
Col17a1-202ENSMUST00000086923 Gm9507D3Z5T3 223 aa8.69□□□□□ -1.02
Col17a1-202ENSMUST00000086923 Adgrg4B7ZCC9 3073 aa8.67□□□□□ -1.02
Col17a1-202ENSMUST00000086923 Krtap10-4Q08EG8 221 aa8.65□□□□□ -1.02
Col17a1-202ENSMUST00000086923 Wdfy3Q6VNB8 3508 aa8.64□□□□□ -1.03
Col17a1-202ENSMUST00000086923 Dchs2A0A0A6YW72 3346 aa8.59□□□□□ -1.03
Col17a1-202ENSMUST00000086923 Dchs1E9PVD3 3291 aa8.52□□□□□ -1.05
Col17a1-202ENSMUST00000086923 Zzef1Q5SSH7 2924 aa8.52□□□□□ -1.05
Col17a1-202ENSMUST00000086923 Krtap10-10A0A1W2P7T6 217 aa8.51□□□□□ -1.05
Col17a1-202ENSMUST00000086923 FlncQ8VHX6 2726 aaKnown RBP8.5□□□□□ -1.05
Col17a1-202ENSMUST00000086923 FcgbpE9Q0B5 2583 aa8.5□□□□□ -1.05
Col17a1-202ENSMUST00000086923 SpegQ62407 3262 aa8.49□□□□□ -1.05
Col17a1-202ENSMUST00000086923 DmdP11531 3678 aa8.47□□□□□ -1.05
Col17a1-202ENSMUST00000086923 Myo15aQ9QZZ4 3511 aa8.45□□□□□ -1.06
Col17a1-202ENSMUST00000086923 LrbaQ9ESE1 2856 aa8.45□□□□□ -1.06
Col17a1-202ENSMUST00000086923 RelnQ60841 3461 aa8.43□□□□□ -1.06
Col17a1-202ENSMUST00000086923 Celsr2Q9R0M0 2920 aa8.4□□□□□ -1.06
Col17a1-202ENSMUST00000086923 Trank1Q8BV79 2999 aa8.39□□□□□ -1.07
Col17a1-202ENSMUST00000086923 Itpr2Q9Z329 2701 aa8.38□□□□□ -1.07
Col17a1-202ENSMUST00000086923 Chd9Q8BYH8 2885 aa8.29□□□□□ -1.08
Col17a1-202ENSMUST00000086923 Helz2E9QAM5 2947 aaKnown RBP8.25□□□□□ -1.09
Col17a1-202ENSMUST00000086923 Vps13cQ8BX70 3748 aa8.23□□□□□ -1.09
Col17a1-202ENSMUST00000086923 Gm2696A0A1W2P709 240 aa8.22□□□□□ -1.09
Col17a1-202ENSMUST00000086923 Akap9Q70FJ1 3797 aa8.22□□□□□ -1.09
Col17a1-202ENSMUST00000086923 Tenm4Q3UHK6 2771 aa8.2□□□□□ -1.1
Col17a1-202ENSMUST00000086923 Nf1Q04690 2841 aa8.2□□□□□ -1.1
Col17a1-202ENSMUST00000086923 Zfhx3Q61329 3726 aa8.17□□□□□ -1.1
Col17a1-202ENSMUST00000086923 Pdzd2E9Q1M1 2796 aa8.17□□□□□ -1.1
Col17a1-202ENSMUST00000086923 Gm17402F6Z0L5 76 aa8.15□□□□□ -1.11
Col17a1-202ENSMUST00000086923 Tenm3Q9WTS6 2715 aa8.14□□□□□ -1.11
Col17a1-202ENSMUST00000086923 Gm17416Q30KP4 66 aa8.1□□□□□ -1.11
Col17a1-202ENSMUST00000086923 Zfhx4Q9JJN2 3550 aa8.03□□□□□ -1.12
Col17a1-202ENSMUST00000086923 2210017I01RikA0A0A6YVV1 95 aa8.03□□□□□ -1.12
Col17a1-202ENSMUST00000086923 Muc5acE9QAQ8 3455 aa7.98□□□□□ -1.13
Col17a1-202ENSMUST00000086923 Megf8P60882 2789 aa7.94□□□□□ -1.14
Col17a1-202ENSMUST00000086923 Lama5Q61001 3718 aa7.92□□□□□ -1.14
Col17a1-202ENSMUST00000086923 Smg1Q8BKX6 3658 aaKnown RBP7.89□□□□□ -1.15
Col17a1-202ENSMUST00000086923 SpenQ62504 3644 aaKnown RBP7.86□□□□□ -1.15
Col17a1-202ENSMUST00000086923 4933428G20RikQ9D3X4 101 aa7.85□□□□□ -1.15
Col17a1-202ENSMUST00000086923 Tenm1Q9WTS4 2731 aa7.83□□□□□ -1.16
Col17a1-202ENSMUST00000086923 Csmd1Q923L3 3564 aa7.82□□□□□ -1.16
Col17a1-202ENSMUST00000086923 Krtap3-2Q9D638 99 aa7.79□□□□□ -1.16
Col17a1-202ENSMUST00000086923 Krtap3-3Q9D7P0 99 aa7.79□□□□□ -1.16
Col17a1-202ENSMUST00000086923 Krtap13-1Q8K198 168 aa7.77□□□□□ -1.17
Col17a1-202ENSMUST00000086923 Gm884A2A9H6 3643 aa7.76□□□□□ -1.17
Col17a1-202ENSMUST00000086923 OtogO55225 2910 aa7.75□□□□□ -1.17
Col17a1-202ENSMUST00000086923 Gm11939A2A592 99 aa7.75□□□□□ -1.17
Col17a1-202ENSMUST00000086923 Gm19668J3QMD1 248 aa7.71□□□□□ -1.18
Col17a1-202ENSMUST00000086923 Krtap7-1Q9D3I6 87 aa7.65□□□□□ -1.18
Col17a1-202ENSMUST00000086923 Gm9736A0A1W2P7N1 277 aa7.65□□□□□ -1.18
Col17a1-202ENSMUST00000086923 Krtap3-1A2A591 98 aa7.64□□□□□ -1.19
Col17a1-202ENSMUST00000086923 Gm9918Q8BUR5 174 aa7.59□□□□□ -1.19
Col17a1-202ENSMUST00000086923 Svep1A2AVA0 3567 aa7.54□□□□□ -1.2
Col17a1-202ENSMUST00000086923 Fbn1Q61554 2873 aaKnown RBP7.54□□□□□ -1.2
Col17a1-202ENSMUST00000086923 Tenm2Q9WTS5 2764 aa7.48□□□□□ -1.21
Col17a1-202ENSMUST00000086923 Muc4Q8JZM8 3443 aa7.39□□□□□ -1.23
Col17a1-202ENSMUST00000086923 Cmya5Q70KF4 3739 aa7.37□□□□□ -1.23
Col17a1-202ENSMUST00000086923 VwfQ8CIZ8 2813 aa7.33□□□□□ -1.24
Col17a1-202ENSMUST00000086923 Gm10318A0A1W2P728 225 aa7.32□□□□□ -1.24
Col17a1-202ENSMUST00000086923 Col7a1Q63870 2944 aa7.3□□□□□ -1.24
Col17a1-202ENSMUST00000086923 Ank2Q8C8R3 3898 aa7.27□□□□□ -1.24
Col17a1-202ENSMUST00000086923 Csmd2V9GX34 3611 aa7.22□□□□□ -1.25
Col17a1-202ENSMUST00000086923 Sprr2a3Q4KL71 83 aa7.12□□□□□ -1.27
Col17a1-202ENSMUST00000086923 Sprr2a1Q9CQK8 83 aa7.12□□□□□ -1.27
Col17a1-202ENSMUST00000086923 Muc6Q80T03 2850 aa7.11□□□□□ -1.27
Col17a1-202ENSMUST00000086923 Krtap19-5O08632 62 aa7.02□□□□□ -1.29
Col17a1-202ENSMUST00000086923 Crct1Q6PAI5 102 aa7.02□□□□□ -1.29
Col17a1-202ENSMUST00000086923 Gm19402J3QJV4 266 aa6.94□□□□□ -1.3
Col17a1-202ENSMUST00000086923 LystP97412 3788 aa6.93□□□□□ -1.3
Col17a1-202ENSMUST00000086923 Krtap1-5A2A590 122 aa6.83□□□□□ -1.32
Col17a1-202ENSMUST00000086923 CubnQ9JLB4 3623 aa6.81□□□□□ -1.32
Col17a1-202ENSMUST00000086923 Dnah14A0A140LIJ4 4489 aa6.8□□□□□ -1.32
Col17a1-202ENSMUST00000086923 Gm6358A0A087WPH4 74 aa6.74□□□□□ -1.33
Col17a1-202ENSMUST00000086923 BsnO88737 3942 aa6.69□□□□□ -1.34
Col17a1-202ENSMUST00000086923 Xirp2Q4U4S6 3784 aa6.68□□□□□ -1.34
Col17a1-202ENSMUST00000086923 Krtap19-9bQ99NG9 58 aa6.64□□□□□ -1.35
Col17a1-202ENSMUST00000086923 Krtap12-1Q9Z287 130 aa6.63□□□□□ -1.35
Col17a1-202ENSMUST00000086923 Huwe1Q7TMY8 4377 aaKnown RBP6.62□□□□□ -1.35
Col17a1-202ENSMUST00000086923 Krtap19-9aF8WH65 55 aa6.6□□□□□ -1.35
Col17a1-202ENSMUST00000086923 Krtap1-4Q3V2D6 188 aa6.59□□□□□ -1.35
Col17a1-202ENSMUST00000086923 Dnah10D3YYQ8 4591 aa6.56□□□□□ -1.36
Col17a1-202ENSMUST00000086923 Hspg2Q05793 3707 aaKnown RBP6.5□□□□□ -1.37
Col17a1-202ENSMUST00000086923 Csmd3Q80T79 3707 aa6.46□□□□□ -1.37
Col17a1-202ENSMUST00000086923 Dnah5Q8VHE6 4621 aa6.4□□□□□ -1.39
Col17a1-202ENSMUST00000086923 Dnah17Q69Z23 4481 aa6.38□□□□□ -1.39
Col17a1-202ENSMUST00000086923 Gm18596A0A1W2P860 280 aa6.38□□□□□ -1.39
Col17a1-202ENSMUST00000086923 Krtap8-1O08633 61 aa6.35□□□□□ -1.39
Col17a1-202ENSMUST00000086923 PlecQ9QXS1 4691 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms