RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Tenm3Q9WTS6 2715 aa10.31□□□□□ -0.76
Sdc3-201ENSMUST00000070478 RelnQ60841 3461 aa10.3□□□□□ -0.76
Sdc3-201ENSMUST00000070478 ApcQ61315 2845 aa10.3□□□□□ -0.76
Sdc3-201ENSMUST00000070478 Pdzd2E9Q1M1 2796 aa10.28□□□□□ -0.76
Sdc3-201ENSMUST00000070478 LrbaQ9ESE1 2856 aa10.26□□□□□ -0.77
Sdc3-201ENSMUST00000070478 Wdfy3Q6VNB8 3508 aa10.24□□□□□ -0.77
Sdc3-201ENSMUST00000070478 Tnp2P11378 117 aa10.22□□□□□ -0.77
Sdc3-201ENSMUST00000070478 SpegQ62407 3262 aa10.18□□□□□ -0.78
Sdc3-201ENSMUST00000070478 Gm2310J3QNJ2 377 aa10.18□□□□□ -0.78
Sdc3-201ENSMUST00000070478 Myo15aQ9QZZ4 3511 aa10.17□□□□□ -0.78
Sdc3-201ENSMUST00000070478 Camk2n1Q6QWF9 78 aa10.17□□□□□ -0.78
Sdc3-201ENSMUST00000070478 Gm3646F6S692 53 aa10.16□□□□□ -0.78
Sdc3-201ENSMUST00000070478 BC029722A0A0N4SW31 51 aa10.14□□□□□ -0.79
Sdc3-201ENSMUST00000070478 Rps29P62274 56 aa10.13□□□□□ -0.79
Sdc3-201ENSMUST00000070478 Rpl37Q9D823 97 aa10.12□□□□□ -0.79
Sdc3-201ENSMUST00000070478 SmcpP15265 143 aa10.1□□□□□ -0.79
Sdc3-201ENSMUST00000070478 Gm19426M0QWC7 77 aa10.1□□□□□ -0.79
Sdc3-201ENSMUST00000070478 Helz2E9QAM5 2947 aaKnown RBP10.09□□□□□ -0.79
Sdc3-201ENSMUST00000070478 Gm2696A0A1W2P709 240 aa10.09□□□□□ -0.79
Sdc3-201ENSMUST00000070478 DmdP11531 3678 aa9.96□□□□□ -0.82
Sdc3-201ENSMUST00000070478 Akap9Q70FJ1 3797 aa9.95□□□□□ -0.82
Sdc3-201ENSMUST00000070478 Romo1P60603 79 aa9.95□□□□□ -0.82
Sdc3-201ENSMUST00000070478 4933415A04RikQ9D443 101 aa9.91□□□□□ -0.82
Sdc3-201ENSMUST00000070478 Cox6b2Q80ZN9 88 aa9.89□□□□□ -0.83
Sdc3-201ENSMUST00000070478 Muc5acE9QAQ8 3455 aa9.88□□□□□ -0.83
Sdc3-201ENSMUST00000070478 Gm10382Q3V0T5 144 aa9.87□□□□□ -0.83
Sdc3-201ENSMUST00000070478 Vps13cQ8BX70 3748 aa9.87□□□□□ -0.83
Sdc3-201ENSMUST00000070478 Tenm1Q9WTS4 2731 aa9.86□□□□□ -0.83
Sdc3-201ENSMUST00000070478 Zfhx3Q61329 3726 aa9.85□□□□□ -0.83
Sdc3-201ENSMUST00000070478 D6Ertd527eA0A0N4SWI3 464 aa9.78□□□□□ -0.84
Sdc3-201ENSMUST00000070478 1700042G07RikB1AUF7 90 aa9.73□□□□□ -0.85
Sdc3-201ENSMUST00000070478 Gm5965D3Z724 196 aa9.73□□□□□ -0.85
Sdc3-201ENSMUST00000070478 OtogO55225 2910 aa9.71□□□□□ -0.86
Sdc3-201ENSMUST00000070478 Tenm2Q9WTS5 2764 aa9.66□□□□□ -0.86
Sdc3-201ENSMUST00000070478 Csmd1Q923L3 3564 aa9.61□□□□□ -0.87
Sdc3-201ENSMUST00000070478 Smg1Q8BKX6 3658 aaKnown RBP9.58□□□□□ -0.88
Sdc3-201ENSMUST00000070478 SpenQ62504 3644 aaKnown RBP9.57□□□□□ -0.88
Sdc3-201ENSMUST00000070478 Zfhx4Q9JJN2 3550 aa9.55□□□□□ -0.88
Sdc3-201ENSMUST00000070478 2310057N15RikQ9D6T8 200 aa9.54□□□□□ -0.88
Sdc3-201ENSMUST00000070478 Lama5Q61001 3718 aa9.49□□□□□ -0.89
Sdc3-201ENSMUST00000070478 Gm21887J3QQ04 176 aa9.37□□□□□ -0.91
Sdc3-201ENSMUST00000070478 VwfQ8CIZ8 2813 aa9.34□□□□□ -0.91
Sdc3-201ENSMUST00000070478 Fbn1Q61554 2873 aaKnown RBP9.31□□□□□ -0.92
Sdc3-201ENSMUST00000070478 A930033H14RikG5E8X6 103 aa9.29□□□□□ -0.92
Sdc3-201ENSMUST00000070478 Megf8P60882 2789 aa9.26□□□□□ -0.93
Sdc3-201ENSMUST00000070478 Gm884A2A9H6 3643 aa9.17□□□□□ -0.94
Sdc3-201ENSMUST00000070478 Gm9736A0A1W2P7N1 277 aa9.15□□□□□ -0.94
Sdc3-201ENSMUST00000070478 Col7a1Q63870 2944 aa9.14□□□□□ -0.95
Sdc3-201ENSMUST00000070478 Gm20537G3UYK7 97 aa9.13□□□□□ -0.95
Sdc3-201ENSMUST00000070478 2310079G19RikQ9D6L6 185 aa9.12□□□□□ -0.95
Sdc3-201ENSMUST00000070478 Gm17416Q30KP4 66 aa9.08□□□□□ -0.96
Sdc3-201ENSMUST00000070478 Svep1A2AVA0 3567 aa9.06□□□□□ -0.96
Sdc3-201ENSMUST00000070478 Muc4Q8JZM8 3443 aa9.04□□□□□ -0.96
Sdc3-201ENSMUST00000070478 Tnp1P10856 55 aa9.04□□□□□ -0.96
Sdc3-201ENSMUST00000070478 B930094E09RikQ8C4T2 136 aa9□□□□□ -0.97
Sdc3-201ENSMUST00000070478 Cmya5Q70KF4 3739 aa8.96□□□□□ -0.97
Sdc3-201ENSMUST00000070478 Ndufaf8A2AMZ4 74 aa8.95□□□□□ -0.98
Sdc3-201ENSMUST00000070478 Gm40193A0A1B0GT39 78 aa8.95□□□□□ -0.98
Sdc3-201ENSMUST00000070478 2210017I01RikA0A0A6YVV1 95 aa8.91□□□□□ -0.98
Sdc3-201ENSMUST00000070478 Muc6Q80T03 2850 aa8.9□□□□□ -0.98
Sdc3-201ENSMUST00000070478 Gm9918Q8BUR5 174 aa8.88□□□□□ -0.99
Sdc3-201ENSMUST00000070478 Ank2Q8C8R3 3898 aa8.79□□□□□ -1
Sdc3-201ENSMUST00000070478 Krtap19-5O08632 62 aa8.78□□□□□ -1
Sdc3-201ENSMUST00000070478 Gm11939A2A592 99 aa8.76□□□□□ -1.01
Sdc3-201ENSMUST00000070478 Csmd2V9GX34 3611 aa8.68□□□□□ -1.02
Sdc3-201ENSMUST00000070478 Gm17402F6Z0L5 76 aa8.63□□□□□ -1.03
Sdc3-201ENSMUST00000070478 Gm10318A0A1W2P728 225 aa8.6□□□□□ -1.03
Sdc3-201ENSMUST00000070478 Gm9112A2AI92 75 aa8.54□□□□□ -1.04
Sdc3-201ENSMUST00000070478 Krtap13-1Q8K198 168 aa8.5□□□□□ -1.05
Sdc3-201ENSMUST00000070478 Crct1Q6PAI5 102 aa8.49□□□□□ -1.05
Sdc3-201ENSMUST00000070478 Prm2P07978 107 aa8.48□□□□□ -1.05
Sdc3-201ENSMUST00000070478 Krtap3-2Q9D638 99 aa8.44□□□□□ -1.06
Sdc3-201ENSMUST00000070478 Krtap3-3Q9D7P0 99 aa8.44□□□□□ -1.06
Sdc3-201ENSMUST00000070478 LystP97412 3788 aa8.39□□□□□ -1.07
Sdc3-201ENSMUST00000070478 Dnah14A0A140LIJ4 4489 aa8.35□□□□□ -1.07
Sdc3-201ENSMUST00000070478 CubnQ9JLB4 3623 aa8.34□□□□□ -1.07
Sdc3-201ENSMUST00000070478 Gm19668J3QMD1 248 aa8.34□□□□□ -1.07
Sdc3-201ENSMUST00000070478 Krtap3-1A2A591 98 aa8.28□□□□□ -1.08
Sdc3-201ENSMUST00000070478 Huwe1Q7TMY8 4377 aaKnown RBP8.09□□□□□ -1.11
Sdc3-201ENSMUST00000070478 Dnah10D3YYQ8 4591 aa8.07□□□□□ -1.12
Sdc3-201ENSMUST00000070478 Dnah5Q8VHE6 4621 aa8□□□□□ -1.13
Sdc3-201ENSMUST00000070478 Xirp2Q4U4S6 3784 aa7.91□□□□□ -1.14
Sdc3-201ENSMUST00000070478 Stard9Q80TF6 4561 aa7.89□□□□□ -1.15
Sdc3-201ENSMUST00000070478 Vps13dB1ART2 4390 aa7.88□□□□□ -1.15
Sdc3-201ENSMUST00000070478 PlecQ9QXS1 4691 aaKnown RBP7.87□□□□□ -1.15
Sdc3-201ENSMUST00000070478 BsnO88737 3942 aa7.87□□□□□ -1.15
Sdc3-201ENSMUST00000070478 Dnah17Q69Z23 4481 aa7.86□□□□□ -1.15
Sdc3-201ENSMUST00000070478 4933428G20RikQ9D3X4 101 aa7.85□□□□□ -1.15
Sdc3-201ENSMUST00000070478 Csmd3Q80T79 3707 aa7.85□□□□□ -1.15
Sdc3-201ENSMUST00000070478 Hspg2Q05793 3707 aaKnown RBP7.84□□□□□ -1.15
Sdc3-201ENSMUST00000070478 Krtap1-5A2A590 122 aa7.81□□□□□ -1.16
Sdc3-201ENSMUST00000070478 Gm18596A0A1W2P860 280 aa7.76□□□□□ -1.17
Sdc3-201ENSMUST00000070478 LorP18165 486 aa7.68□□□□□ -1.18
Sdc3-201ENSMUST00000070478 Sprr2a3Q4KL71 83 aa7.66□□□□□ -1.18
Sdc3-201ENSMUST00000070478 Sprr2a1Q9CQK8 83 aa7.66□□□□□ -1.18
Sdc3-201ENSMUST00000070478 Krtap19-9aF8WH65 55 aa7.65□□□□□ -1.18
Sdc3-201ENSMUST00000070478 Dnah11E9Q7N9 4488 aa7.63□□□□□ -1.19
Sdc3-201ENSMUST00000070478 Krtap1-4Q3V2D6 188 aa7.6□□□□□ -1.19
Sdc3-201ENSMUST00000070478 Dnah9B1AR51 4484 aa7.59□□□□□ -1.19
Sdc3-201ENSMUST00000070478 Dnah7bL7N1Y0 4068 aa7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms