RNA–Protein interactions for RNA: ENSMUST00000064190.12

Rai1-201, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,348 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-201ENSMUST00000064190 D6Ertd527eA0A0N4SWI3 464 aa8.83□□□□□ -1
Rai1-201ENSMUST00000064190 Adgrg4B7ZCC9 3073 aa8.8□□□□□ -1
Rai1-201ENSMUST00000064190 Pkd1l1Q8R526 2615 aa8.79□□□□□ -1
Rai1-201ENSMUST00000064190 Igfn1Q3KNY0 2849 aa8.79□□□□□ -1
Rai1-201ENSMUST00000064190 Stab2Q8R4U0 2559 aa8.77□□□□□ -1.01
Rai1-201ENSMUST00000064190 Itpr2Q9Z329 2701 aa8.77□□□□□ -1.01
Rai1-201ENSMUST00000064190 DspE9Q557 2883 aaKnown RBP8.75□□□□□ -1.01
Rai1-201ENSMUST00000064190 ApcQ61315 2845 aa8.73□□□□□ -1.01
Rai1-201ENSMUST00000064190 Rps29P62274 56 aa8.73□□□□□ -1.01
Rai1-201ENSMUST00000064190 2310061N02RikQ9D6S9 174 aa8.71□□□□□ -1.02
Rai1-201ENSMUST00000064190 Wdfy3Q6VNB8 3508 aa8.69□□□□□ -1.02
Rai1-201ENSMUST00000064190 Utp20Q5XG71 2788 aaKnown RBP8.68□□□□□ -1.02
Rai1-201ENSMUST00000064190 Muc2Q80Z19 2680 aa8.68□□□□□ -1.02
Rai1-201ENSMUST00000064190 Gm9918Q8BUR5 174 aa8.67□□□□□ -1.02
Rai1-201ENSMUST00000064190 Gm40193A0A1B0GT39 78 aa8.65□□□□□ -1.03
Rai1-201ENSMUST00000064190 NbeaQ9EPN1 2936 aa8.62□□□□□ -1.03
Rai1-201ENSMUST00000064190 SmcpP15265 143 aa8.58□□□□□ -1.04
Rai1-201ENSMUST00000064190 Trank1Q8BV79 2999 aa8.54□□□□□ -1.04
Rai1-201ENSMUST00000064190 Akap9Q70FJ1 3797 aa8.51□□□□□ -1.05
Rai1-201ENSMUST00000064190 Gm20537G3UYK7 97 aa8.51□□□□□ -1.05
Rai1-201ENSMUST00000064190 Prm2P07978 107 aa8.45□□□□□ -1.06
Rai1-201ENSMUST00000064190 B930094E09RikQ8C4T2 136 aa8.45□□□□□ -1.06
Rai1-201ENSMUST00000064190 Zzef1Q5SSH7 2924 aa8.44□□□□□ -1.06
Rai1-201ENSMUST00000064190 Srrm2Q8BTI8 2703 aaKnown RBP8.44□□□□□ -1.06
Rai1-201ENSMUST00000064190 Hivep1Q03172 2688 aa8.43□□□□□ -1.06
Rai1-201ENSMUST00000064190 FlncQ8VHX6 2726 aaKnown RBP8.41□□□□□ -1.06
Rai1-201ENSMUST00000064190 Tex15F8VPN2 2785 aa8.41□□□□□ -1.06
Rai1-201ENSMUST00000064190 Chd9Q8BYH8 2885 aa8.4□□□□□ -1.06
Rai1-201ENSMUST00000064190 DmdP11531 3678 aa8.4□□□□□ -1.07
Rai1-201ENSMUST00000064190 Vps13cQ8BX70 3748 aa8.38□□□□□ -1.07
Rai1-201ENSMUST00000064190 Tenm4Q3UHK6 2771 aa8.34□□□□□ -1.07
Rai1-201ENSMUST00000064190 A930033H14RikG5E8X6 103 aa8.33□□□□□ -1.08
Rai1-201ENSMUST00000064190 RelnQ60841 3461 aa8.32□□□□□ -1.08
Rai1-201ENSMUST00000064190 LrbaQ9ESE1 2856 aa8.32□□□□□ -1.08
Rai1-201ENSMUST00000064190 FcgbpE9Q0B5 2583 aa8.29□□□□□ -1.08
Rai1-201ENSMUST00000064190 Celsr2Q9R0M0 2920 aa8.29□□□□□ -1.08
Rai1-201ENSMUST00000064190 4933428G20RikQ9D3X4 101 aa8.26□□□□□ -1.09
Rai1-201ENSMUST00000064190 Smg1Q8BKX6 3658 aaKnown RBP8.26□□□□□ -1.09
Rai1-201ENSMUST00000064190 Csmd1Q923L3 3564 aa8.24□□□□□ -1.09
Rai1-201ENSMUST00000064190 Muc5acE9QAQ8 3455 aa8.24□□□□□ -1.09
Rai1-201ENSMUST00000064190 Nf1Q04690 2841 aa8.16□□□□□ -1.1
Rai1-201ENSMUST00000064190 TgO08710 2766 aa8.15□□□□□ -1.11
Rai1-201ENSMUST00000064190 Gm10318A0A1W2P728 225 aa8.13□□□□□ -1.11
Rai1-201ENSMUST00000064190 Tenm1Q9WTS4 2731 aa8.12□□□□□ -1.11
Rai1-201ENSMUST00000064190 Zfhx4Q9JJN2 3550 aa8.12□□□□□ -1.11
Rai1-201ENSMUST00000064190 Gm9736A0A1W2P7N1 277 aa8.11□□□□□ -1.11
Rai1-201ENSMUST00000064190 Pdzd2E9Q1M1 2796 aa8.06□□□□□ -1.12
Rai1-201ENSMUST00000064190 OtogO55225 2910 aa8.02□□□□□ -1.13
Rai1-201ENSMUST00000064190 Lama5Q61001 3718 aa7.96□□□□□ -1.14
Rai1-201ENSMUST00000064190 Cmya5Q70KF4 3739 aa7.93□□□□□ -1.14
Rai1-201ENSMUST00000064190 SpenQ62504 3644 aaKnown RBP7.89□□□□□ -1.15
Rai1-201ENSMUST00000064190 Csmd2V9GX34 3611 aa7.88□□□□□ -1.15
Rai1-201ENSMUST00000064190 2310079G19RikQ9D6L6 185 aa7.87□□□□□ -1.15
Rai1-201ENSMUST00000064190 Gm19668J3QMD1 248 aa7.83□□□□□ -1.16
Rai1-201ENSMUST00000064190 Tenm2Q9WTS5 2764 aa7.83□□□□□ -1.16
Rai1-201ENSMUST00000064190 Crct1Q6PAI5 102 aa7.78□□□□□ -1.16
Rai1-201ENSMUST00000064190 VwfQ8CIZ8 2813 aa7.74□□□□□ -1.17
Rai1-201ENSMUST00000064190 Gm6358A0A087WPH4 74 aa7.71□□□□□ -1.18
Rai1-201ENSMUST00000064190 Gm17416Q30KP4 66 aa7.69□□□□□ -1.18
Rai1-201ENSMUST00000064190 Col7a1Q63870 2944 aa7.69□□□□□ -1.18
Rai1-201ENSMUST00000064190 Gm17402F6Z0L5 76 aa7.67□□□□□ -1.18
Rai1-201ENSMUST00000064190 Tenm3Q9WTS6 2715 aa7.67□□□□□ -1.18
Rai1-201ENSMUST00000064190 2210017I01RikA0A0A6YVV1 95 aa7.66□□□□□ -1.18
Rai1-201ENSMUST00000064190 Gm884A2A9H6 3643 aa7.66□□□□□ -1.18
Rai1-201ENSMUST00000064190 Megf8P60882 2789 aa7.64□□□□□ -1.19
Rai1-201ENSMUST00000064190 Helz2E9QAM5 2947 aaKnown RBP7.63□□□□□ -1.19
Rai1-201ENSMUST00000064190 Svep1A2AVA0 3567 aa7.57□□□□□ -1.2
Rai1-201ENSMUST00000064190 Muc4Q8JZM8 3443 aa7.53□□□□□ -1.2
Rai1-201ENSMUST00000064190 Krtap13-1Q8K198 168 aa7.41□□□□□ -1.22
Rai1-201ENSMUST00000064190 CubnQ9JLB4 3623 aa7.27□□□□□ -1.25
Rai1-201ENSMUST00000064190 Sprr2kO70562 68 aa7.25□□□□□ -1.25
Rai1-201ENSMUST00000064190 LystP97412 3788 aa7.24□□□□□ -1.25
Rai1-201ENSMUST00000064190 Gm18596A0A1W2P860 280 aa7.23□□□□□ -1.25
Rai1-201ENSMUST00000064190 Krtap19-5O08632 62 aa7.22□□□□□ -1.25
Rai1-201ENSMUST00000064190 Ank2Q8C8R3 3898 aa7.21□□□□□ -1.26
Rai1-201ENSMUST00000064190 Gm11939A2A592 99 aa7.2□□□□□ -1.26
Rai1-201ENSMUST00000064190 Fbn1Q61554 2873 aaKnown RBP7.14□□□□□ -1.27
Rai1-201ENSMUST00000064190 Krtap7-1Q9D3I6 87 aa7.07□□□□□ -1.28
Rai1-201ENSMUST00000064190 Krtap3-1A2A591 98 aa7.07□□□□□ -1.28
Rai1-201ENSMUST00000064190 Csmd3Q80T79 3707 aa7.06□□□□□ -1.28
Rai1-201ENSMUST00000064190 Gm19402J3QJV4 266 aa7.05□□□□□ -1.28
Rai1-201ENSMUST00000064190 Muc6Q80T03 2850 aa7.03□□□□□ -1.28
Rai1-201ENSMUST00000064190 Krtap8-1O08633 61 aa7.03□□□□□ -1.28
Rai1-201ENSMUST00000064190 Hspg2Q05793 3707 aaKnown RBP6.97□□□□□ -1.29
Rai1-201ENSMUST00000064190 BsnO88737 3942 aa6.84□□□□□ -1.32
Rai1-201ENSMUST00000064190 Krtap3-2Q9D638 99 aa6.83□□□□□ -1.32
Rai1-201ENSMUST00000064190 Krtap3-3Q9D7P0 99 aa6.83□□□□□ -1.32
Rai1-201ENSMUST00000064190 Sprr2gO70558 76 aa6.82□□□□□ -1.32
Rai1-201ENSMUST00000064190 Krtap19-9aF8WH65 55 aa6.76□□□□□ -1.33
Rai1-201ENSMUST00000064190 Huwe1Q7TMY8 4377 aaKnown RBP6.75□□□□□ -1.33
Rai1-201ENSMUST00000064190 Xirp2Q4U4S6 3784 aa6.7□□□□□ -1.34
Rai1-201ENSMUST00000064190 LorP18165 486 aa6.63□□□□□ -1.35
Rai1-201ENSMUST00000064190 Krtap12-1Q9Z287 130 aa6.61□□□□□ -1.35
Rai1-201ENSMUST00000064190 Krtap19-9bQ99NG9 58 aa6.57□□□□□ -1.36
Rai1-201ENSMUST00000064190 Sprr2a3Q4KL71 83 aa6.56□□□□□ -1.36
Rai1-201ENSMUST00000064190 Sprr2a1Q9CQK8 83 aa6.56□□□□□ -1.36
Rai1-201ENSMUST00000064190 Krtap1-5A2A590 122 aa6.54□□□□□ -1.36
Rai1-201ENSMUST00000064190 Dnah14A0A140LIJ4 4489 aa6.49□□□□□ -1.37
Rai1-201ENSMUST00000064190 Krtap1-4Q3V2D6 188 aa6.46□□□□□ -1.38
Rai1-201ENSMUST00000064190 Lce3bQ9CQM7 98 aa6.38□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms