RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Celsr1O35161 3034 aa5.83□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Gm20537G3UYK7 97 aa5.82□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Usp34Q6ZQ93 3582 aa5.82□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Rps29P62274 56 aa5.81□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Gm11565A2A4M7 156 aa5.8□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Lama3Q61789 3330 aa5.8□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Rev3lQ61493 3122 aa5.78□□□□□ -1.48
Col6a3-201ENSMUST00000056925 Wdfy4E9Q2M9 3149 aa5.76□□□□□ -1.49
Col6a3-201ENSMUST00000056925 Col12a1Q60847 3120 aa5.71□□□□□ -1.49
Col6a3-201ENSMUST00000056925 HttP42859 3119 aa5.71□□□□□ -1.49
Col6a3-201ENSMUST00000056925 Unc80Q8BLN6 3261 aa5.71□□□□□ -1.49
Col6a3-201ENSMUST00000056925 Megf8P60882 2789 aa5.69□□□□□ -1.5
Col6a3-201ENSMUST00000056925 AspmQ8CJ27 3122 aa5.69□□□□□ -1.5
Col6a3-201ENSMUST00000056925 Gm36176A0A1W2P8D5 158 aa5.63□□□□□ -1.51
Col6a3-201ENSMUST00000056925 Tnp2P11378 117 aa5.63□□□□□ -1.51
Col6a3-201ENSMUST00000056925 Helz2E9QAM5 2947 aaKnown RBP5.62□□□□□ -1.51
Col6a3-201ENSMUST00000056925 B930094E09RikQ8C4T2 136 aa5.59□□□□□ -1.51
Col6a3-201ENSMUST00000056925 Zfhx3Q61329 3726 aa5.59□□□□□ -1.51
Col6a3-201ENSMUST00000056925 Adgrg4B7ZCC9 3073 aa5.56□□□□□ -1.52
Col6a3-201ENSMUST00000056925 VwfQ8CIZ8 2813 aa5.56□□□□□ -1.52
Col6a3-201ENSMUST00000056925 Celsr3Q91ZI0 3301 aa5.54□□□□□ -1.52
Col6a3-201ENSMUST00000056925 2310061N02RikQ9D6S9 174 aa5.54□□□□□ -1.52
Col6a3-201ENSMUST00000056925 Cdh23Q99PF4 3354 aa5.48□□□□□ -1.53
Col6a3-201ENSMUST00000056925 Gm9507D3Z5T3 223 aa5.46□□□□□ -1.54
Col6a3-201ENSMUST00000056925 Dchs2A0A0A6YW72 3346 aa5.44□□□□□ -1.54
Col6a3-201ENSMUST00000056925 2310079G19RikQ9D6L6 185 aa5.42□□□□□ -1.54
Col6a3-201ENSMUST00000056925 Lrrc37aB1AWG4 3215 aa5.42□□□□□ -1.54
Col6a3-201ENSMUST00000056925 Krtap10-4Q08EG8 221 aa5.4□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Myo15aQ9QZZ4 3511 aa5.39□□□□□ -1.55
Col6a3-201ENSMUST00000056925 A930033H14RikG5E8X6 103 aa5.39□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Brca2P97929 3329 aa5.38□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Akap9Q70FJ1 3797 aa5.37□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Tenm4Q3UHK6 2771 aa5.37□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Gm17416Q30KP4 66 aa5.37□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Tenm2Q9WTS5 2764 aa5.35□□□□□ -1.55
Col6a3-201ENSMUST00000056925 OtogO55225 2910 aa5.34□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Krtap10-10A0A1W2P7T6 217 aa5.34□□□□□ -1.55
Col6a3-201ENSMUST00000056925 Vps13cQ8BX70 3748 aa5.3□□□□□ -1.56
Col6a3-201ENSMUST00000056925 Fbn1Q61554 2873 aaKnown RBP5.29□□□□□ -1.56
Col6a3-201ENSMUST00000056925 4933428G20RikQ9D3X4 101 aa5.25□□□□□ -1.57
Col6a3-201ENSMUST00000056925 VcanQ62059 3357 aa5.25□□□□□ -1.57
Col6a3-201ENSMUST00000056925 DmdP11531 3678 aa5.24□□□□□ -1.57
Col6a3-201ENSMUST00000056925 Gm17402F6Z0L5 76 aa5.23□□□□□ -1.57
Col6a3-201ENSMUST00000056925 SpegQ62407 3262 aa5.23□□□□□ -1.57
Col6a3-201ENSMUST00000056925 Col6a3E9PWQ3 3284 aa5.22□□□□□ -1.57
Col6a3-201ENSMUST00000056925 Gm2696A0A1W2P709 240 aa5.19□□□□□ -1.58
Col6a3-201ENSMUST00000056925 Szt2A2A9C3 3431 aa5.13□□□□□ -1.59
Col6a3-201ENSMUST00000056925 SpenQ62504 3644 aaKnown RBP5.12□□□□□ -1.59
Col6a3-201ENSMUST00000056925 Cmya5Q70KF4 3739 aa5.12□□□□□ -1.59
Col6a3-201ENSMUST00000056925 Col7a1Q63870 2944 aa5.1□□□□□ -1.59
Col6a3-201ENSMUST00000056925 Smg1Q8BKX6 3658 aaKnown RBP5.07□□□□□ -1.6
Col6a3-201ENSMUST00000056925 2210017I01RikA0A0A6YVV1 95 aa5.06□□□□□ -1.6
Col6a3-201ENSMUST00000056925 Wdfy3Q6VNB8 3508 aa5.01□□□□□ -1.61
Col6a3-201ENSMUST00000056925 Dchs1E9PVD3 3291 aa5□□□□□ -1.61
Col6a3-201ENSMUST00000056925 Ank2Q8C8R3 3898 aa4.99□□□□□ -1.61
Col6a3-201ENSMUST00000056925 Gm19668J3QMD1 248 aa4.97□□□□□ -1.61
Col6a3-201ENSMUST00000056925 Csmd1Q923L3 3564 aa4.95□□□□□ -1.62
Col6a3-201ENSMUST00000056925 Muc5acE9QAQ8 3455 aa4.94□□□□□ -1.62
Col6a3-201ENSMUST00000056925 Zfhx4Q9JJN2 3550 aa4.93□□□□□ -1.62
Col6a3-201ENSMUST00000056925 Gm9918Q8BUR5 174 aa4.92□□□□□ -1.62
Col6a3-201ENSMUST00000056925 RelnQ60841 3461 aa4.88□□□□□ -1.63
Col6a3-201ENSMUST00000056925 Krtap13-1Q8K198 168 aa4.87□□□□□ -1.63
Col6a3-201ENSMUST00000056925 Lama5Q61001 3718 aa4.85□□□□□ -1.63
Col6a3-201ENSMUST00000056925 BsnO88737 3942 aa4.84□□□□□ -1.63
Col6a3-201ENSMUST00000056925 Muc6Q80T03 2850 aa4.8□□□□□ -1.64
Col6a3-201ENSMUST00000056925 Gm9736A0A1W2P7N1 277 aa4.79□□□□□ -1.64
Col6a3-201ENSMUST00000056925 Gm884A2A9H6 3643 aa4.76□□□□□ -1.65
Col6a3-201ENSMUST00000056925 Krtap7-1Q9D3I6 87 aa4.72□□□□□ -1.65
Col6a3-201ENSMUST00000056925 Gm11939A2A592 99 aa4.7□□□□□ -1.66
Col6a3-201ENSMUST00000056925 LystP97412 3788 aa4.68□□□□□ -1.66
Col6a3-201ENSMUST00000056925 Krtap3-1A2A591 98 aa4.65□□□□□ -1.66
Col6a3-201ENSMUST00000056925 Csmd2V9GX34 3611 aa4.63□□□□□ -1.67
Col6a3-201ENSMUST00000056925 Krtap3-2Q9D638 99 aa4.61□□□□□ -1.67
Col6a3-201ENSMUST00000056925 Krtap3-3Q9D7P0 99 aa4.61□□□□□ -1.67
Col6a3-201ENSMUST00000056925 Gm10318A0A1W2P728 225 aa4.6□□□□□ -1.67
Col6a3-201ENSMUST00000056925 Muc4Q8JZM8 3443 aa4.58□□□□□ -1.68
Col6a3-201ENSMUST00000056925 Csmd3Q80T79 3707 aa4.54□□□□□ -1.68
Col6a3-201ENSMUST00000056925 Crct1Q6PAI5 102 aa4.49□□□□□ -1.69
Col6a3-201ENSMUST00000056925 Gm6358A0A087WPH4 74 aa4.46□□□□□ -1.7
Col6a3-201ENSMUST00000056925 Xirp2Q4U4S6 3784 aa4.44□□□□□ -1.7
Col6a3-201ENSMUST00000056925 Svep1A2AVA0 3567 aa4.41□□□□□ -1.7
Col6a3-201ENSMUST00000056925 Gm18596A0A1W2P860 280 aa4.4□□□□□ -1.71
Col6a3-201ENSMUST00000056925 Krtap19-5O08632 62 aa4.4□□□□□ -1.71
Col6a3-201ENSMUST00000056925 Sprr2a3Q4KL71 83 aa4.38□□□□□ -1.71
Col6a3-201ENSMUST00000056925 Sprr2a1Q9CQK8 83 aa4.38□□□□□ -1.71
Col6a3-201ENSMUST00000056925 Hspg2Q05793 3707 aaKnown RBP4.35□□□□□ -1.71
Col6a3-201ENSMUST00000056925 Gm19402J3QJV4 266 aa4.3□□□□□ -1.72
Col6a3-201ENSMUST00000056925 Krtap1-5A2A590 122 aa4.29□□□□□ -1.72
Col6a3-201ENSMUST00000056925 Krtap19-9aF8WH65 55 aa4.28□□□□□ -1.72
Col6a3-201ENSMUST00000056925 Krtap19-9bQ99NG9 58 aa4.26□□□□□ -1.73
Col6a3-201ENSMUST00000056925 CubnQ9JLB4 3623 aa4.24□□□□□ -1.73
Col6a3-201ENSMUST00000056925 Krtap12-1Q9Z287 130 aa4.19□□□□□ -1.74
Col6a3-201ENSMUST00000056925 Krtap8-1O08633 61 aa4.17□□□□□ -1.74
Col6a3-201ENSMUST00000056925 Dnah3Q8BW94 4083 aa4.16□□□□□ -1.74
Col6a3-201ENSMUST00000056925 Vps13bQ80TY5 3993 aa4.14□□□□□ -1.75
Col6a3-201ENSMUST00000056925 Krtap1-4Q3V2D6 188 aa4.12□□□□□ -1.75
Col6a3-201ENSMUST00000056925 Dnah7bL7N1Y0 4068 aa4.09□□□□□ -1.76
Col6a3-201ENSMUST00000056925 Gm10100J3QK64 120 aa4.01□□□□□ -1.77
Col6a3-201ENSMUST00000056925 Gm10272F7CZ33 110 aa4□□□□□ -1.77
Col6a3-201ENSMUST00000056925 Sprr2kO70562 68 aa3.97□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 189.9 ms