RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Wdfy4E9Q2M9 3149 aa7.52□□□□□ -1.21
Chd4-201ENSMUST00000056889 AspmQ8CJ27 3122 aa7.51□□□□□ -1.21
Chd4-201ENSMUST00000056889 Gm10318A0A1W2P728 225 aa7.51□□□□□ -1.21
Chd4-201ENSMUST00000056889 Srrm2Q8BTI8 2703 aaKnown RBP7.49□□□□□ -1.21
Chd4-201ENSMUST00000056889 TgO08710 2766 aa7.49□□□□□ -1.21
Chd4-201ENSMUST00000056889 Stab2Q8R4U0 2559 aa7.49□□□□□ -1.21
Chd4-201ENSMUST00000056889 Tnrc18Q80WC3 2878 aa7.49□□□□□ -1.21
Chd4-201ENSMUST00000056889 SpegQ62407 3262 aa7.48□□□□□ -1.21
Chd4-201ENSMUST00000056889 Adgrg4B7ZCC9 3073 aa7.47□□□□□ -1.21
Chd4-201ENSMUST00000056889 Utp20Q5XG71 2788 aaKnown RBP7.45□□□□□ -1.22
Chd4-201ENSMUST00000056889 A930033H14RikG5E8X6 103 aa7.45□□□□□ -1.22
Chd4-201ENSMUST00000056889 Gm9736A0A1W2P7N1 277 aa7.44□□□□□ -1.22
Chd4-201ENSMUST00000056889 FrylF8VQ05 3007 aa7.43□□□□□ -1.22
Chd4-201ENSMUST00000056889 Myo15aQ9QZZ4 3511 aa7.41□□□□□ -1.22
Chd4-201ENSMUST00000056889 Dchs1E9PVD3 3291 aa7.38□□□□□ -1.23
Chd4-201ENSMUST00000056889 Lrrc37aB1AWG4 3215 aa7.37□□□□□ -1.23
Chd4-201ENSMUST00000056889 Tex15F8VPN2 2785 aa7.35□□□□□ -1.23
Chd4-201ENSMUST00000056889 Pkd1l1Q8R526 2615 aa7.34□□□□□ -1.23
Chd4-201ENSMUST00000056889 LrbaQ9ESE1 2856 aa7.33□□□□□ -1.24
Chd4-201ENSMUST00000056889 Itpr2Q9Z329 2701 aa7.31□□□□□ -1.24
Chd4-201ENSMUST00000056889 VcanQ62059 3357 aa7.3□□□□□ -1.24
Chd4-201ENSMUST00000056889 Col6a5A6H584 2640 aa7.29□□□□□ -1.24
Chd4-201ENSMUST00000056889 Wdfy3Q6VNB8 3508 aa7.28□□□□□ -1.24
Chd4-201ENSMUST00000056889 Zzef1Q5SSH7 2924 aa7.28□□□□□ -1.24
Chd4-201ENSMUST00000056889 Csmd1Q923L3 3564 aa7.28□□□□□ -1.24
Chd4-201ENSMUST00000056889 Myo15bI7HPW8 3033 aa7.27□□□□□ -1.25
Chd4-201ENSMUST00000056889 Itpr1P11881 2749 aa7.27□□□□□ -1.25
Chd4-201ENSMUST00000056889 Vps13cQ8BX70 3748 aa7.24□□□□□ -1.25
Chd4-201ENSMUST00000056889 Akap9Q70FJ1 3797 aa7.24□□□□□ -1.25
Chd4-201ENSMUST00000056889 FcgbpE9Q0B5 2583 aa7.21□□□□□ -1.26
Chd4-201ENSMUST00000056889 Trank1Q8BV79 2999 aa7.16□□□□□ -1.26
Chd4-201ENSMUST00000056889 Crct1Q6PAI5 102 aa7.15□□□□□ -1.26
Chd4-201ENSMUST00000056889 NbeaQ9EPN1 2936 aa7.14□□□□□ -1.27
Chd4-201ENSMUST00000056889 Gm17416Q30KP4 66 aa7.14□□□□□ -1.27
Chd4-201ENSMUST00000056889 Muc2Q80Z19 2680 aa7.12□□□□□ -1.27
Chd4-201ENSMUST00000056889 Igfn1Q3KNY0 2849 aa7.12□□□□□ -1.27
Chd4-201ENSMUST00000056889 2210017I01RikA0A0A6YVV1 95 aa7.11□□□□□ -1.27
Chd4-201ENSMUST00000056889 Gm19668J3QMD1 248 aa7.11□□□□□ -1.27
Chd4-201ENSMUST00000056889 Gm17402F6Z0L5 76 aa7.1□□□□□ -1.27
Chd4-201ENSMUST00000056889 4933428G20RikQ9D3X4 101 aa7.09□□□□□ -1.28
Chd4-201ENSMUST00000056889 Celsr2Q9R0M0 2920 aa7.04□□□□□ -1.28
Chd4-201ENSMUST00000056889 Hivep1Q03172 2688 aa7.02□□□□□ -1.29
Chd4-201ENSMUST00000056889 RelnQ60841 3461 aa7□□□□□ -1.29
Chd4-201ENSMUST00000056889 Chd9Q8BYH8 2885 aa6.97□□□□□ -1.29
Chd4-201ENSMUST00000056889 DmdP11531 3678 aa6.96□□□□□ -1.3
Chd4-201ENSMUST00000056889 FlncQ8VHX6 2726 aaKnown RBP6.94□□□□□ -1.3
Chd4-201ENSMUST00000056889 Pdzd2E9Q1M1 2796 aa6.94□□□□□ -1.3
Chd4-201ENSMUST00000056889 Zfhx4Q9JJN2 3550 aa6.92□□□□□ -1.3
Chd4-201ENSMUST00000056889 Smg1Q8BKX6 3658 aaKnown RBP6.9□□□□□ -1.3
Chd4-201ENSMUST00000056889 Nf1Q04690 2841 aa6.89□□□□□ -1.31
Chd4-201ENSMUST00000056889 Muc5acE9QAQ8 3455 aa6.88□□□□□ -1.31
Chd4-201ENSMUST00000056889 Tenm4Q3UHK6 2771 aa6.86□□□□□ -1.31
Chd4-201ENSMUST00000056889 Krtap13-1Q8K198 168 aa6.85□□□□□ -1.31
Chd4-201ENSMUST00000056889 Tenm1Q9WTS4 2731 aa6.79□□□□□ -1.32
Chd4-201ENSMUST00000056889 Cmya5Q70KF4 3739 aa6.78□□□□□ -1.32
Chd4-201ENSMUST00000056889 Gm11939A2A592 99 aa6.77□□□□□ -1.33
Chd4-201ENSMUST00000056889 Gm6358A0A087WPH4 74 aa6.76□□□□□ -1.33
Chd4-201ENSMUST00000056889 SpenQ62504 3644 aaKnown RBP6.75□□□□□ -1.33
Chd4-201ENSMUST00000056889 Tenm2Q9WTS5 2764 aa6.72□□□□□ -1.33
Chd4-201ENSMUST00000056889 Helz2E9QAM5 2947 aaKnown RBP6.72□□□□□ -1.33
Chd4-201ENSMUST00000056889 Krtap3-1A2A591 98 aa6.69□□□□□ -1.34
Chd4-201ENSMUST00000056889 Megf8P60882 2789 aa6.68□□□□□ -1.34
Chd4-201ENSMUST00000056889 Tenm3Q9WTS6 2715 aa6.68□□□□□ -1.34
Chd4-201ENSMUST00000056889 Lama5Q61001 3718 aa6.6□□□□□ -1.35
Chd4-201ENSMUST00000056889 Gm884A2A9H6 3643 aa6.59□□□□□ -1.35
Chd4-201ENSMUST00000056889 Krtap19-5O08632 62 aa6.59□□□□□ -1.35
Chd4-201ENSMUST00000056889 Krtap3-2Q9D638 99 aa6.54□□□□□ -1.36
Chd4-201ENSMUST00000056889 Krtap3-3Q9D7P0 99 aa6.54□□□□□ -1.36
Chd4-201ENSMUST00000056889 OtogO55225 2910 aa6.52□□□□□ -1.37
Chd4-201ENSMUST00000056889 Csmd2V9GX34 3611 aa6.47□□□□□ -1.37
Chd4-201ENSMUST00000056889 VwfQ8CIZ8 2813 aa6.41□□□□□ -1.38
Chd4-201ENSMUST00000056889 Svep1A2AVA0 3567 aa6.4□□□□□ -1.38
Chd4-201ENSMUST00000056889 Krtap7-1Q9D3I6 87 aa6.37□□□□□ -1.39
Chd4-201ENSMUST00000056889 Sprr2kO70562 68 aa6.36□□□□□ -1.39
Chd4-201ENSMUST00000056889 Fbn1Q61554 2873 aaKnown RBP6.27□□□□□ -1.41
Chd4-201ENSMUST00000056889 Ank2Q8C8R3 3898 aa6.22□□□□□ -1.41
Chd4-201ENSMUST00000056889 Gm18596A0A1W2P860 280 aa6.21□□□□□ -1.42
Chd4-201ENSMUST00000056889 Muc4Q8JZM8 3443 aa6.21□□□□□ -1.42
Chd4-201ENSMUST00000056889 Sprr2a3Q4KL71 83 aa6.2□□□□□ -1.42
Chd4-201ENSMUST00000056889 Sprr2a1Q9CQK8 83 aa6.2□□□□□ -1.42
Chd4-201ENSMUST00000056889 LystP97412 3788 aa6.2□□□□□ -1.42
Chd4-201ENSMUST00000056889 Krtap8-1O08633 61 aa6.15□□□□□ -1.42
Chd4-201ENSMUST00000056889 Krtap19-9aF8WH65 55 aa6.15□□□□□ -1.42
Chd4-201ENSMUST00000056889 Huwe1Q7TMY8 4377 aaKnown RBP6.14□□□□□ -1.43
Chd4-201ENSMUST00000056889 Csmd3Q80T79 3707 aa6.14□□□□□ -1.43
Chd4-201ENSMUST00000056889 Gm19402J3QJV4 266 aa6.11□□□□□ -1.43
Chd4-201ENSMUST00000056889 Krtap1-5A2A590 122 aa6.1□□□□□ -1.43
Chd4-201ENSMUST00000056889 LorP18165 486 aa6.1□□□□□ -1.43
Chd4-201ENSMUST00000056889 Col7a1Q63870 2944 aa6.09□□□□□ -1.43
Chd4-201ENSMUST00000056889 Hspg2Q05793 3707 aaKnown RBP6.07□□□□□ -1.44
Chd4-201ENSMUST00000056889 Krtap12-1Q9Z287 130 aa6.03□□□□□ -1.44
Chd4-201ENSMUST00000056889 Krtap19-9bQ99NG9 58 aa6.01□□□□□ -1.45
Chd4-201ENSMUST00000056889 CubnQ9JLB4 3623 aa5.99□□□□□ -1.45
Chd4-201ENSMUST00000056889 Krtap1-4Q3V2D6 188 aa5.99□□□□□ -1.45
Chd4-201ENSMUST00000056889 Muc6Q80T03 2850 aa5.98□□□□□ -1.45
Chd4-201ENSMUST00000056889 Dnah14A0A140LIJ4 4489 aa5.97□□□□□ -1.45
Chd4-201ENSMUST00000056889 Sprr2gO70558 76 aa5.93□□□□□ -1.46
Chd4-201ENSMUST00000056889 Dnah10D3YYQ8 4591 aa5.92□□□□□ -1.46
Chd4-201ENSMUST00000056889 Xirp2Q4U4S6 3784 aa5.77□□□□□ -1.49
Chd4-201ENSMUST00000056889 BsnO88737 3942 aa5.7□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 86.5 ms