RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gm2310J3QNJ2 377 aa9.02□□□□□ -0.97
Ubr3-201ENSMUST00000055758 Krtap14O08640 167 aa9.01□□□□□ -0.97
Ubr3-201ENSMUST00000055758 Col6a5A6H584 2640 aa8.99□□□□□ -0.97
Ubr3-201ENSMUST00000055758 Itpr1P11881 2749 aa8.99□□□□□ -0.97
Ubr3-201ENSMUST00000055758 Srrm2Q8BTI8 2703 aaKnown RBP8.97□□□□□ -0.97
Ubr3-201ENSMUST00000055758 Dchs1E9PVD3 3291 aa8.94□□□□□ -0.98
Ubr3-201ENSMUST00000055758 LrbaQ9ESE1 2856 aa8.92□□□□□ -0.98
Ubr3-201ENSMUST00000055758 RelnQ60841 3461 aa8.92□□□□□ -0.98
Ubr3-201ENSMUST00000055758 Cmya5Q70KF4 3739 aa8.9□□□□□ -0.98
Ubr3-201ENSMUST00000055758 Gm40193A0A1B0GT39 78 aa8.88□□□□□ -0.99
Ubr3-201ENSMUST00000055758 Csmd1Q923L3 3564 aa8.88□□□□□ -0.99
Ubr3-201ENSMUST00000055758 Gm11565A2A4M7 156 aa8.85□□□□□ -0.99
Ubr3-201ENSMUST00000055758 Gm9507D3Z5T3 223 aa8.85□□□□□ -0.99
Ubr3-201ENSMUST00000055758 Adgrg4B7ZCC9 3073 aa8.85□□□□□ -0.99
Ubr3-201ENSMUST00000055758 DmdP11531 3678 aa8.82□□□□□ -1
Ubr3-201ENSMUST00000055758 NbeaQ9EPN1 2936 aa8.81□□□□□ -1
Ubr3-201ENSMUST00000055758 Vps13cQ8BX70 3748 aa8.8□□□□□ -1
Ubr3-201ENSMUST00000055758 Krtap10-4Q08EG8 221 aa8.79□□□□□ -1
Ubr3-201ENSMUST00000055758 D6Ertd527eA0A0N4SWI3 464 aa8.76□□□□□ -1.01
Ubr3-201ENSMUST00000055758 Prm2P07978 107 aa8.76□□□□□ -1.01
Ubr3-201ENSMUST00000055758 TgO08710 2766 aa8.73□□□□□ -1.01
Ubr3-201ENSMUST00000055758 Muc2Q80Z19 2680 aa8.73□□□□□ -1.01
Ubr3-201ENSMUST00000055758 Igfn1Q3KNY0 2849 aa8.71□□□□□ -1.01
Ubr3-201ENSMUST00000055758 SpenQ62504 3644 aaKnown RBP8.71□□□□□ -1.02
Ubr3-201ENSMUST00000055758 Nf1Q04690 2841 aa8.67□□□□□ -1.02
Ubr3-201ENSMUST00000055758 Krtap10-10A0A1W2P7T6 217 aa8.66□□□□□ -1.02
Ubr3-201ENSMUST00000055758 Smg1Q8BKX6 3658 aaKnown RBP8.63□□□□□ -1.03
Ubr3-201ENSMUST00000055758 Tenm3Q9WTS6 2715 aa8.61□□□□□ -1.03
Ubr3-201ENSMUST00000055758 Rps29P62274 56 aa8.6□□□□□ -1.03
Ubr3-201ENSMUST00000055758 Celsr2Q9R0M0 2920 aa8.6□□□□□ -1.03
Ubr3-201ENSMUST00000055758 Zfhx4Q9JJN2 3550 aa8.59□□□□□ -1.03
Ubr3-201ENSMUST00000055758 Gm5965D3Z724 196 aa8.56□□□□□ -1.04
Ubr3-201ENSMUST00000055758 2310061N02RikQ9D6S9 174 aa8.56□□□□□ -1.04
Ubr3-201ENSMUST00000055758 FcgbpE9Q0B5 2583 aa8.55□□□□□ -1.04
Ubr3-201ENSMUST00000055758 Hivep1Q03172 2688 aa8.54□□□□□ -1.04
Ubr3-201ENSMUST00000055758 Tnp2P11378 117 aa8.53□□□□□ -1.04
Ubr3-201ENSMUST00000055758 2310057N15RikQ9D6T8 200 aa8.52□□□□□ -1.04
Ubr3-201ENSMUST00000055758 Gm20537G3UYK7 97 aa8.51□□□□□ -1.05
Ubr3-201ENSMUST00000055758 Tenm1Q9WTS4 2731 aa8.49□□□□□ -1.05
Ubr3-201ENSMUST00000055758 FlncQ8VHX6 2726 aaKnown RBP8.42□□□□□ -1.06
Ubr3-201ENSMUST00000055758 Gm884A2A9H6 3643 aa8.42□□□□□ -1.06
Ubr3-201ENSMUST00000055758 Pdzd2E9Q1M1 2796 aa8.41□□□□□ -1.06
Ubr3-201ENSMUST00000055758 Gm2696A0A1W2P709 240 aa8.39□□□□□ -1.07
Ubr3-201ENSMUST00000055758 B930094E09RikQ8C4T2 136 aa8.34□□□□□ -1.07
Ubr3-201ENSMUST00000055758 Csmd2V9GX34 3611 aa8.31□□□□□ -1.08
Ubr3-201ENSMUST00000055758 Muc5acE9QAQ8 3455 aa8.27□□□□□ -1.09
Ubr3-201ENSMUST00000055758 4933428G20RikQ9D3X4 101 aa8.27□□□□□ -1.09
Ubr3-201ENSMUST00000055758 Lama5Q61001 3718 aa8.25□□□□□ -1.09
Ubr3-201ENSMUST00000055758 Helz2E9QAM5 2947 aaKnown RBP8.15□□□□□ -1.1
Ubr3-201ENSMUST00000055758 Gm9918Q8BUR5 174 aa8.1□□□□□ -1.11
Ubr3-201ENSMUST00000055758 Ank2Q8C8R3 3898 aa8.08□□□□□ -1.12
Ubr3-201ENSMUST00000055758 Tenm4Q3UHK6 2771 aa8.07□□□□□ -1.12
Ubr3-201ENSMUST00000055758 OtogO55225 2910 aa8.06□□□□□ -1.12
Ubr3-201ENSMUST00000055758 Megf8P60882 2789 aa8.05□□□□□ -1.12
Ubr3-201ENSMUST00000055758 2310079G19RikQ9D6L6 185 aa8.02□□□□□ -1.13
Ubr3-201ENSMUST00000055758 VwfQ8CIZ8 2813 aa7.99□□□□□ -1.13
Ubr3-201ENSMUST00000055758 A930033H14RikG5E8X6 103 aa7.93□□□□□ -1.14
Ubr3-201ENSMUST00000055758 Fbn1Q61554 2873 aaKnown RBP7.86□□□□□ -1.15
Ubr3-201ENSMUST00000055758 Tenm2Q9WTS5 2764 aa7.83□□□□□ -1.16
Ubr3-201ENSMUST00000055758 Csmd3Q80T79 3707 aa7.8□□□□□ -1.16
Ubr3-201ENSMUST00000055758 LystP97412 3788 aa7.79□□□□□ -1.16
Ubr3-201ENSMUST00000055758 Gm9736A0A1W2P7N1 277 aa7.7□□□□□ -1.18
Ubr3-201ENSMUST00000055758 CubnQ9JLB4 3623 aa7.69□□□□□ -1.18
Ubr3-201ENSMUST00000055758 Gm17402F6Z0L5 76 aa7.69□□□□□ -1.18
Ubr3-201ENSMUST00000055758 Gm17416Q30KP4 66 aa7.67□□□□□ -1.18
Ubr3-201ENSMUST00000055758 Hspg2Q05793 3707 aaKnown RBP7.65□□□□□ -1.18
Ubr3-201ENSMUST00000055758 Gm19668J3QMD1 248 aa7.63□□□□□ -1.19
Ubr3-201ENSMUST00000055758 Xirp2Q4U4S6 3784 aa7.63□□□□□ -1.19
Ubr3-201ENSMUST00000055758 2210017I01RikA0A0A6YVV1 95 aa7.62□□□□□ -1.19
Ubr3-201ENSMUST00000055758 Gm10318A0A1W2P728 225 aa7.54□□□□□ -1.2
Ubr3-201ENSMUST00000055758 Muc4Q8JZM8 3443 aa7.51□□□□□ -1.21
Ubr3-201ENSMUST00000055758 Col7a1Q63870 2944 aa7.51□□□□□ -1.21
Ubr3-201ENSMUST00000055758 Svep1A2AVA0 3567 aa7.47□□□□□ -1.21
Ubr3-201ENSMUST00000055758 BsnO88737 3942 aa7.45□□□□□ -1.22
Ubr3-201ENSMUST00000055758 Muc6Q80T03 2850 aa7.38□□□□□ -1.23
Ubr3-201ENSMUST00000055758 Gm6358A0A087WPH4 74 aa7.29□□□□□ -1.24
Ubr3-201ENSMUST00000055758 Crct1Q6PAI5 102 aa7.26□□□□□ -1.25
Ubr3-201ENSMUST00000055758 Krtap13-1Q8K198 168 aa7.26□□□□□ -1.25
Ubr3-201ENSMUST00000055758 Gm18596A0A1W2P860 280 aa7.23□□□□□ -1.25
Ubr3-201ENSMUST00000055758 Gm11939A2A592 99 aa7.2□□□□□ -1.26
Ubr3-201ENSMUST00000055758 Vps13bQ80TY5 3993 aa7.18□□□□□ -1.26
Ubr3-201ENSMUST00000055758 Krtap3-1A2A591 98 aa7.08□□□□□ -1.28
Ubr3-201ENSMUST00000055758 Gm19402J3QJV4 266 aa6.98□□□□□ -1.29
Ubr3-201ENSMUST00000055758 Krtap3-2Q9D638 99 aa6.98□□□□□ -1.29
Ubr3-201ENSMUST00000055758 Krtap3-3Q9D7P0 99 aa6.98□□□□□ -1.29
Ubr3-201ENSMUST00000055758 Krtap19-5O08632 62 aa6.96□□□□□ -1.29
Ubr3-201ENSMUST00000055758 Krtap7-1Q9D3I6 87 aa6.77□□□□□ -1.33
Ubr3-201ENSMUST00000055758 Sprr2kO70562 68 aa6.71□□□□□ -1.33
Ubr3-201ENSMUST00000055758 Dnah3Q8BW94 4083 aa6.71□□□□□ -1.34
Ubr3-201ENSMUST00000055758 Dnah6E9Q0B6 4144 aa6.63□□□□□ -1.35
Ubr3-201ENSMUST00000055758 Krtap8-1O08633 61 aa6.61□□□□□ -1.35
Ubr3-201ENSMUST00000055758 Sprr2a3Q4KL71 83 aa6.59□□□□□ -1.35
Ubr3-201ENSMUST00000055758 Sprr2a1Q9CQK8 83 aa6.59□□□□□ -1.35
Ubr3-201ENSMUST00000055758 Dnah7bL7N1Y0 4068 aa6.58□□□□□ -1.36
Ubr3-201ENSMUST00000055758 Kmt2aP55200 3966 aa6.57□□□□□ -1.36
Ubr3-201ENSMUST00000055758 Krtap19-9aF8WH65 55 aa6.54□□□□□ -1.36
Ubr3-201ENSMUST00000055758 Dnah7cA0A087WR13 4024 aa6.54□□□□□ -1.36
Ubr3-201ENSMUST00000055758 Dnah7aE9Q0T8 4024 aa6.53□□□□□ -1.36
Ubr3-201ENSMUST00000055758 Huwe1Q7TMY8 4377 aaKnown RBP6.5□□□□□ -1.37
Ubr3-201ENSMUST00000055758 Krtap12-1Q9Z287 130 aa6.47□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms