RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Gm10139O88245 57 aa4.58□□□□□ -1.68
Usp40-201ENSMUST00000040783 Hivep1Q03172 2688 aa4.58□□□□□ -1.68
Usp40-201ENSMUST00000040783 Stab2Q8R4U0 2559 aa4.58□□□□□ -1.68
Usp40-201ENSMUST00000040783 HrnrQ8VHD8 2496 aa4.56□□□□□ -1.68
Usp40-201ENSMUST00000040783 Gm37013Q8K491 104 aa4.55□□□□□ -1.68
Usp40-201ENSMUST00000040783 Gm4491E0CX42 125 aa4.55□□□□□ -1.68
Usp40-201ENSMUST00000040783 Camk2n1Q6QWF9 78 aa4.55□□□□□ -1.68
Usp40-201ENSMUST00000040783 Gm9955Q8CEJ8 102 aa4.55□□□□□ -1.68
Usp40-201ENSMUST00000040783 Krtap29-1A2A5X4 342 aa4.54□□□□□ -1.68
Usp40-201ENSMUST00000040783 Krtap15-1Q9QZU5 150 aa4.53□□□□□ -1.68
Usp40-201ENSMUST00000040783 2310050C09RikG5E8Z3 280 aa4.52□□□□□ -1.69
Usp40-201ENSMUST00000040783 Igfn1Q3KNY0 2849 aa4.52□□□□□ -1.69
Usp40-201ENSMUST00000040783 Itpr2Q9Z329 2701 aa4.52□□□□□ -1.69
Usp40-201ENSMUST00000040783 Gm9507D3Z5T3 223 aa4.51□□□□□ -1.69
Usp40-201ENSMUST00000040783 Krtap13O88375 197 aa4.51□□□□□ -1.69
Usp40-201ENSMUST00000040783 Fam229aB2KGE5 128 aa4.5□□□□□ -1.69
Usp40-201ENSMUST00000040783 Gm16253D3Z167 63 aa4.5□□□□□ -1.69
Usp40-201ENSMUST00000040783 Celsr2Q9R0M0 2920 aa4.49□□□□□ -1.69
Usp40-201ENSMUST00000040783 Spink7Q6IE32 76 aa4.47□□□□□ -1.69
Usp40-201ENSMUST00000040783 2310061N02RikQ9D6S9 174 aa4.46□□□□□ -1.69
Usp40-201ENSMUST00000040783 Tenm4Q3UHK6 2771 aa4.46□□□□□ -1.7
Usp40-201ENSMUST00000040783 Gm5767A0A0J9YTU8 78 aa4.45□□□□□ -1.7
Usp40-201ENSMUST00000040783 Xirp2Q4U4S6 3784 aa4.44□□□□□ -1.7
Usp40-201ENSMUST00000040783 Utp20Q5XG71 2788 aaKnown RBP4.43□□□□□ -1.7
Usp40-201ENSMUST00000040783 FlncQ8VHX6 2726 aaKnown RBP4.43□□□□□ -1.7
Usp40-201ENSMUST00000040783 FcgbpE9Q0B5 2583 aa4.42□□□□□ -1.7
Usp40-201ENSMUST00000040783 Gm10382Q3V0T5 144 aa4.42□□□□□ -1.7
Usp40-201ENSMUST00000040783 Krtap10-4Q08EG8 221 aa4.41□□□□□ -1.7
Usp40-201ENSMUST00000040783 CubnQ9JLB4 3623 aa4.41□□□□□ -1.7
Usp40-201ENSMUST00000040783 Tex15F8VPN2 2785 aa4.39□□□□□ -1.71
Usp40-201ENSMUST00000040783 Rpl37Q9D823 97 aa4.39□□□□□ -1.71
Usp40-201ENSMUST00000040783 Krtap14O08640 167 aa4.38□□□□□ -1.71
Usp40-201ENSMUST00000040783 OtogO55225 2910 aa4.37□□□□□ -1.71
Usp40-201ENSMUST00000040783 Krtap10-10A0A1W2P7T6 217 aa4.35□□□□□ -1.71
Usp40-201ENSMUST00000040783 Rps29P62274 56 aa4.34□□□□□ -1.71
Usp40-201ENSMUST00000040783 Tnp2P11378 117 aa4.33□□□□□ -1.72
Usp40-201ENSMUST00000040783 Hspg2Q05793 3707 aaKnown RBP4.32□□□□□ -1.72
Usp40-201ENSMUST00000040783 Cox6b2Q80ZN9 88 aa4.31□□□□□ -1.72
Usp40-201ENSMUST00000040783 Csmd3Q80T79 3707 aa4.29□□□□□ -1.72
Usp40-201ENSMUST00000040783 Gm19426M0QWC7 77 aa4.29□□□□□ -1.72
Usp40-201ENSMUST00000040783 2310057N15RikQ9D6T8 200 aa4.29□□□□□ -1.72
Usp40-201ENSMUST00000040783 Nf1Q04690 2841 aa4.28□□□□□ -1.72
Usp40-201ENSMUST00000040783 TgO08710 2766 aa4.28□□□□□ -1.72
Usp40-201ENSMUST00000040783 BC029722A0A0N4SW31 51 aa4.28□□□□□ -1.73
Usp40-201ENSMUST00000040783 Gm2696A0A1W2P709 240 aa4.27□□□□□ -1.73
Usp40-201ENSMUST00000040783 Gm5965D3Z724 196 aa4.24□□□□□ -1.73
Usp40-201ENSMUST00000040783 Gm2310J3QNJ2 377 aa4.23□□□□□ -1.73
Usp40-201ENSMUST00000040783 BsnO88737 3942 aa4.23□□□□□ -1.73
Usp40-201ENSMUST00000040783 Srrm2Q8BTI8 2703 aaKnown RBP4.22□□□□□ -1.73
Usp40-201ENSMUST00000040783 Tenm3Q9WTS6 2715 aa4.21□□□□□ -1.73
Usp40-201ENSMUST00000040783 Pdzd2E9Q1M1 2796 aa4.19□□□□□ -1.74
Usp40-201ENSMUST00000040783 Ank2Q8C8R3 3898 aa4.18□□□□□ -1.74
Usp40-201ENSMUST00000040783 D6Ertd527eA0A0N4SWI3 464 aa4.16□□□□□ -1.74
Usp40-201ENSMUST00000040783 Gm40193A0A1B0GT39 78 aa4.16□□□□□ -1.74
Usp40-201ENSMUST00000040783 ApcQ61315 2845 aa4.16□□□□□ -1.74
Usp40-201ENSMUST00000040783 Tenm2Q9WTS5 2764 aa4.13□□□□□ -1.75
Usp40-201ENSMUST00000040783 A930033H14RikG5E8X6 103 aa4.06□□□□□ -1.76
Usp40-201ENSMUST00000040783 Fbn1Q61554 2873 aaKnown RBP4.05□□□□□ -1.76
Usp40-201ENSMUST00000040783 Tenm1Q9WTS4 2731 aa4.04□□□□□ -1.76
Usp40-201ENSMUST00000040783 Gm20537G3UYK7 97 aa4.03□□□□□ -1.76
Usp40-201ENSMUST00000040783 Megf8P60882 2789 aa4□□□□□ -1.77
Usp40-201ENSMUST00000040783 Col7a1Q63870 2944 aa3.99□□□□□ -1.77
Usp40-201ENSMUST00000040783 Dnah11E9Q7N9 4488 aa3.98□□□□□ -1.77
Usp40-201ENSMUST00000040783 Dnah7bL7N1Y0 4068 aa3.98□□□□□ -1.77
Usp40-201ENSMUST00000040783 Kmt2aP55200 3966 aa3.96□□□□□ -1.78
Usp40-201ENSMUST00000040783 Dnah3Q8BW94 4083 aa3.94□□□□□ -1.78
Usp40-201ENSMUST00000040783 VwfQ8CIZ8 2813 aa3.93□□□□□ -1.78
Usp40-201ENSMUST00000040783 Dnah1E9Q8T7 4250 aa3.92□□□□□ -1.78
Usp40-201ENSMUST00000040783 2310079G19RikQ9D6L6 185 aa3.88□□□□□ -1.79
Usp40-201ENSMUST00000040783 Tnp1P10856 55 aa3.86□□□□□ -1.79
Usp40-201ENSMUST00000040783 Gm9736A0A1W2P7N1 277 aa3.86□□□□□ -1.79
Usp40-201ENSMUST00000040783 Gm17416Q30KP4 66 aa3.85□□□□□ -1.79
Usp40-201ENSMUST00000040783 Dnah9B1AR51 4484 aa3.84□□□□□ -1.8
Usp40-201ENSMUST00000040783 Muc6Q80T03 2850 aa3.78□□□□□ -1.8
Usp40-201ENSMUST00000040783 Gm9918Q8BUR5 174 aa3.78□□□□□ -1.8
Usp40-201ENSMUST00000040783 Dnah17Q69Z23 4481 aa3.78□□□□□ -1.8
Usp40-201ENSMUST00000040783 Krtap19-5O08632 62 aa3.76□□□□□ -1.81
Usp40-201ENSMUST00000040783 Dnah10D3YYQ8 4591 aa3.76□□□□□ -1.81
Usp40-201ENSMUST00000040783 Dnah14A0A140LIJ4 4489 aa3.76□□□□□ -1.81
Usp40-201ENSMUST00000040783 2210017I01RikA0A0A6YVV1 95 aa3.76□□□□□ -1.81
Usp40-201ENSMUST00000040783 B930094E09RikQ8C4T2 136 aa3.75□□□□□ -1.81
Usp40-201ENSMUST00000040783 Krtap3-2Q9D638 99 aa3.73□□□□□ -1.81
Usp40-201ENSMUST00000040783 Krtap3-3Q9D7P0 99 aa3.73□□□□□ -1.81
Usp40-201ENSMUST00000040783 Hectd4E9Q2E4 4418 aa3.69□□□□□ -1.82
Usp40-201ENSMUST00000040783 Dnah7aE9Q0T8 4024 aa3.69□□□□□ -1.82
Usp40-201ENSMUST00000040783 Dnah6E9Q0B6 4144 aa3.68□□□□□ -1.82
Usp40-201ENSMUST00000040783 Gm11939A2A592 99 aa3.66□□□□□ -1.82
Usp40-201ENSMUST00000040783 Dnah5Q8VHE6 4621 aa3.66□□□□□ -1.82
Usp40-201ENSMUST00000040783 Dnah7cA0A087WR13 4024 aa3.65□□□□□ -1.82
Usp40-201ENSMUST00000040783 Gm17402F6Z0L5 76 aa3.64□□□□□ -1.83
Usp40-201ENSMUST00000040783 Dync2h1Q45VK7 4306 aa3.61□□□□□ -1.83
Usp40-201ENSMUST00000040783 Dnah2P0C6F1 4456 aa3.61□□□□□ -1.83
Usp40-201ENSMUST00000040783 Stard9Q80TF6 4561 aa3.6□□□□□ -1.83
Usp40-201ENSMUST00000040783 Vps13dB1ART2 4390 aa3.6□□□□□ -1.83
Usp40-201ENSMUST00000040783 Gm10318A0A1W2P728 225 aa3.59□□□□□ -1.84
Usp40-201ENSMUST00000040783 Fras1Q80T14 4010 aa3.58□□□□□ -1.84
Usp40-201ENSMUST00000040783 ApobE9Q414 4505 aa3.58□□□□□ -1.84
Usp40-201ENSMUST00000040783 Crct1Q6PAI5 102 aa3.58□□□□□ -1.84
Usp40-201ENSMUST00000040783 Huwe1Q7TMY8 4377 aaKnown RBP3.57□□□□□ -1.84
Usp40-201ENSMUST00000040783 Krtap13-1Q8K198 168 aa3.57□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms