RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Trank1Q8BV79 2999 aa9.62□□□□□ -0.87
Col27a1-201ENSMUST00000036300 Krtap14O08640 167 aa9.62□□□□□ -0.87
Col27a1-201ENSMUST00000036300 2310057N15RikQ9D6T8 200 aa9.52□□□□□ -0.88
Col27a1-201ENSMUST00000036300 Gm21887J3QQ04 176 aa9.52□□□□□ -0.89
Col27a1-201ENSMUST00000036300 FlncQ8VHX6 2726 aaKnown RBP9.52□□□□□ -0.89
Col27a1-201ENSMUST00000036300 Gm2696A0A1W2P709 240 aa9.52□□□□□ -0.89
Col27a1-201ENSMUST00000036300 NbeaQ9EPN1 2936 aa9.5□□□□□ -0.89
Col27a1-201ENSMUST00000036300 Gm2310J3QNJ2 377 aa9.5□□□□□ -0.89
Col27a1-201ENSMUST00000036300 VcanQ62059 3357 aa9.49□□□□□ -0.89
Col27a1-201ENSMUST00000036300 FcgbpE9Q0B5 2583 aa9.48□□□□□ -0.89
Col27a1-201ENSMUST00000036300 LrbaQ9ESE1 2856 aa9.47□□□□□ -0.89
Col27a1-201ENSMUST00000036300 Hivep1Q03172 2688 aa9.42□□□□□ -0.9
Col27a1-201ENSMUST00000036300 Cox6b2Q80ZN9 88 aa9.42□□□□□ -0.9
Col27a1-201ENSMUST00000036300 Wdfy3Q6VNB8 3508 aa9.39□□□□□ -0.91
Col27a1-201ENSMUST00000036300 Rps29P62274 56 aa9.38□□□□□ -0.91
Col27a1-201ENSMUST00000036300 1700042G07RikB1AUF7 90 aa9.36□□□□□ -0.91
Col27a1-201ENSMUST00000036300 2310061N02RikQ9D6S9 174 aa9.36□□□□□ -0.91
Col27a1-201ENSMUST00000036300 Tnp1P10856 55 aa9.36□□□□□ -0.91
Col27a1-201ENSMUST00000036300 4933415A04RikQ9D443 101 aa9.35□□□□□ -0.91
Col27a1-201ENSMUST00000036300 Celsr2Q9R0M0 2920 aa9.34□□□□□ -0.91
Col27a1-201ENSMUST00000036300 Tenm1Q9WTS4 2731 aa9.34□□□□□ -0.91
Col27a1-201ENSMUST00000036300 Gm5965D3Z724 196 aa9.34□□□□□ -0.91
Col27a1-201ENSMUST00000036300 Ndufaf8A2AMZ4 74 aa9.32□□□□□ -0.92
Col27a1-201ENSMUST00000036300 Nf1Q04690 2841 aa9.26□□□□□ -0.93
Col27a1-201ENSMUST00000036300 Akap9Q70FJ1 3797 aa9.25□□□□□ -0.93
Col27a1-201ENSMUST00000036300 Pdzd2E9Q1M1 2796 aa9.25□□□□□ -0.93
Col27a1-201ENSMUST00000036300 TgO08710 2766 aa9.25□□□□□ -0.93
Col27a1-201ENSMUST00000036300 D6Ertd527eA0A0N4SWI3 464 aa9.2□□□□□ -0.94
Col27a1-201ENSMUST00000036300 Tenm4Q3UHK6 2771 aa9.17□□□□□ -0.94
Col27a1-201ENSMUST00000036300 DmdP11531 3678 aa9.11□□□□□ -0.95
Col27a1-201ENSMUST00000036300 Gm9112A2AI92 75 aa9.08□□□□□ -0.96
Col27a1-201ENSMUST00000036300 A930033H14RikG5E8X6 103 aa9.02□□□□□ -0.96
Col27a1-201ENSMUST00000036300 Vps13cQ8BX70 3748 aa9.02□□□□□ -0.97
Col27a1-201ENSMUST00000036300 Csmd1Q923L3 3564 aa8.98□□□□□ -0.97
Col27a1-201ENSMUST00000036300 RelnQ60841 3461 aa8.95□□□□□ -0.98
Col27a1-201ENSMUST00000036300 Gm9918Q8BUR5 174 aa8.95□□□□□ -0.98
Col27a1-201ENSMUST00000036300 Muc5acE9QAQ8 3455 aa8.92□□□□□ -0.98
Col27a1-201ENSMUST00000036300 OtogO55225 2910 aa8.91□□□□□ -0.98
Col27a1-201ENSMUST00000036300 Smg1Q8BKX6 3658 aaKnown RBP8.9□□□□□ -0.98
Col27a1-201ENSMUST00000036300 Gm40193A0A1B0GT39 78 aa8.86□□□□□ -0.99
Col27a1-201ENSMUST00000036300 VwfQ8CIZ8 2813 aa8.79□□□□□ -1
Col27a1-201ENSMUST00000036300 Tenm3Q9WTS6 2715 aa8.78□□□□□ -1
Col27a1-201ENSMUST00000036300 Zfhx4Q9JJN2 3550 aa8.76□□□□□ -1.01
Col27a1-201ENSMUST00000036300 B930094E09RikQ8C4T2 136 aa8.75□□□□□ -1.01
Col27a1-201ENSMUST00000036300 Gm20537G3UYK7 97 aa8.74□□□□□ -1.01
Col27a1-201ENSMUST00000036300 Prm2P07978 107 aa8.73□□□□□ -1.01
Col27a1-201ENSMUST00000036300 Tenm2Q9WTS5 2764 aa8.69□□□□□ -1.02
Col27a1-201ENSMUST00000036300 Cmya5Q70KF4 3739 aa8.69□□□□□ -1.02
Col27a1-201ENSMUST00000036300 Megf8P60882 2789 aa8.68□□□□□ -1.02
Col27a1-201ENSMUST00000036300 Helz2E9QAM5 2947 aaKnown RBP8.63□□□□□ -1.03
Col27a1-201ENSMUST00000036300 Gm9736A0A1W2P7N1 277 aa8.62□□□□□ -1.03
Col27a1-201ENSMUST00000036300 SmcpP15265 143 aa8.62□□□□□ -1.03
Col27a1-201ENSMUST00000036300 SpenQ62504 3644 aaKnown RBP8.61□□□□□ -1.03
Col27a1-201ENSMUST00000036300 Csmd2V9GX34 3611 aa8.51□□□□□ -1.05
Col27a1-201ENSMUST00000036300 4933428G20RikQ9D3X4 101 aa8.5□□□□□ -1.05
Col27a1-201ENSMUST00000036300 Gm10318A0A1W2P728 225 aa8.5□□□□□ -1.05
Col27a1-201ENSMUST00000036300 Lama5Q61001 3718 aa8.47□□□□□ -1.05
Col27a1-201ENSMUST00000036300 Col7a1Q63870 2944 aa8.47□□□□□ -1.05
Col27a1-201ENSMUST00000036300 Gm17416Q30KP4 66 aa8.25□□□□□ -1.09
Col27a1-201ENSMUST00000036300 Crct1Q6PAI5 102 aa8.25□□□□□ -1.09
Col27a1-201ENSMUST00000036300 2310079G19RikQ9D6L6 185 aa8.25□□□□□ -1.09
Col27a1-201ENSMUST00000036300 Gm884A2A9H6 3643 aa8.22□□□□□ -1.09
Col27a1-201ENSMUST00000036300 Gm19668J3QMD1 248 aa8.18□□□□□ -1.1
Col27a1-201ENSMUST00000036300 2210017I01RikA0A0A6YVV1 95 aa8.18□□□□□ -1.1
Col27a1-201ENSMUST00000036300 Fbn1Q61554 2873 aaKnown RBP8.15□□□□□ -1.1
Col27a1-201ENSMUST00000036300 Gm17402F6Z0L5 76 aa8.09□□□□□ -1.11
Col27a1-201ENSMUST00000036300 Muc4Q8JZM8 3443 aa8.01□□□□□ -1.13
Col27a1-201ENSMUST00000036300 Svep1A2AVA0 3567 aa7.98□□□□□ -1.13
Col27a1-201ENSMUST00000036300 Gm6358A0A087WPH4 74 aa7.97□□□□□ -1.13
Col27a1-201ENSMUST00000036300 LystP97412 3788 aa7.92□□□□□ -1.14
Col27a1-201ENSMUST00000036300 Ank2Q8C8R3 3898 aa7.91□□□□□ -1.14
Col27a1-201ENSMUST00000036300 CubnQ9JLB4 3623 aa7.9□□□□□ -1.14
Col27a1-201ENSMUST00000036300 Krtap13-1Q8K198 168 aa7.89□□□□□ -1.15
Col27a1-201ENSMUST00000036300 Krtap19-5O08632 62 aa7.83□□□□□ -1.16
Col27a1-201ENSMUST00000036300 Csmd3Q80T79 3707 aa7.79□□□□□ -1.16
Col27a1-201ENSMUST00000036300 Muc6Q80T03 2850 aa7.78□□□□□ -1.16
Col27a1-201ENSMUST00000036300 Sprr2kO70562 68 aa7.71□□□□□ -1.17
Col27a1-201ENSMUST00000036300 Gm11939A2A592 99 aa7.65□□□□□ -1.18
Col27a1-201ENSMUST00000036300 Hspg2Q05793 3707 aaKnown RBP7.61□□□□□ -1.19
Col27a1-201ENSMUST00000036300 Krtap8-1O08633 61 aa7.48□□□□□ -1.21
Col27a1-201ENSMUST00000036300 Krtap3-1A2A591 98 aa7.44□□□□□ -1.22
Col27a1-201ENSMUST00000036300 Xirp2Q4U4S6 3784 aa7.39□□□□□ -1.23
Col27a1-201ENSMUST00000036300 BsnO88737 3942 aa7.37□□□□□ -1.23
Col27a1-201ENSMUST00000036300 Krtap7-1Q9D3I6 87 aa7.35□□□□□ -1.23
Col27a1-201ENSMUST00000036300 Gm18596A0A1W2P860 280 aa7.35□□□□□ -1.23
Col27a1-201ENSMUST00000036300 Sprr2gO70558 76 aa7.29□□□□□ -1.24
Col27a1-201ENSMUST00000036300 Huwe1Q7TMY8 4377 aaKnown RBP7.27□□□□□ -1.25
Col27a1-201ENSMUST00000036300 Krtap19-9aF8WH65 55 aa7.23□□□□□ -1.25
Col27a1-201ENSMUST00000036300 LorP18165 486 aa7.19□□□□□ -1.26
Col27a1-201ENSMUST00000036300 Krtap3-2Q9D638 99 aa7.15□□□□□ -1.27
Col27a1-201ENSMUST00000036300 Krtap3-3Q9D7P0 99 aa7.15□□□□□ -1.27
Col27a1-201ENSMUST00000036300 Gm19402J3QJV4 266 aa7.13□□□□□ -1.27
Col27a1-201ENSMUST00000036300 Krtap19-9bQ99NG9 58 aa6.96□□□□□ -1.3
Col27a1-201ENSMUST00000036300 Krtap1-5A2A590 122 aa6.96□□□□□ -1.3
Col27a1-201ENSMUST00000036300 Sprr2a3Q4KL71 83 aa6.92□□□□□ -1.3
Col27a1-201ENSMUST00000036300 Sprr2a1Q9CQK8 83 aa6.92□□□□□ -1.3
Col27a1-201ENSMUST00000036300 Krtap1-4Q3V2D6 188 aa6.9□□□□□ -1.31
Col27a1-201ENSMUST00000036300 Dnah14A0A140LIJ4 4489 aa6.87□□□□□ -1.31
Col27a1-201ENSMUST00000036300 Krtap12-1Q9Z287 130 aa6.86□□□□□ -1.31
Col27a1-201ENSMUST00000036300 Vps13bQ80TY5 3993 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms