RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 FryE9Q8I9 3020 aa4.71□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Gm7173A0A0G2JEB6 3132 aa4.71□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Cfap54Q8C6S9 3106 aa4.71□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Usp34Q6ZQ93 3582 aa4.7□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 SmcpP15265 143 aa4.7□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Celsr3Q91ZI0 3301 aa4.69□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Chd9Q8BYH8 2885 aa4.69□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Myo15bI7HPW8 3033 aa4.69□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Fbn2Q61555 2907 aa4.68□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Gm10318A0A1W2P728 225 aa4.68□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Zzef1Q5SSH7 2924 aa4.67□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 AtmQ62388 3066 aa4.67□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Frem2Q6NVD0 3160 aa4.67□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Lama1P19137 3084 aa4.66□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 HttP42859 3119 aa4.66□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 Vps13aQ5H8C4 3166 aa4.66□□□□□ -1.66
Sptbn1-202ENSMUST00000011877 FrylF8VQ05 3007 aa4.65□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 TgO08710 2766 aa4.62□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Celsr1O35161 3034 aa4.62□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Tenm1Q9WTS4 2731 aa4.61□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Hivep1Q03172 2688 aa4.6□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Tenm4Q3UHK6 2771 aa4.6□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Chd7A2AJK6 2986 aaKnown RBP4.6□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Crct1Q6PAI5 102 aa4.6□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 LrbaQ9ESE1 2856 aa4.59□□□□□ -1.67
Sptbn1-202ENSMUST00000011877 Muc2Q80Z19 2680 aa4.59□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Sprr2kO70562 68 aa4.58□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Gm6358A0A087WPH4 74 aa4.58□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Myo15aQ9QZZ4 3511 aa4.57□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 FlncQ8VHX6 2726 aaKnown RBP4.56□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Trank1Q8BV79 2999 aa4.55□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Pdzd2E9Q1M1 2796 aa4.54□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Cdh23Q99PF4 3354 aa4.54□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 Krtap13-1Q8K198 168 aa4.53□□□□□ -1.68
Sptbn1-202ENSMUST00000011877 AspmQ8CJ27 3122 aa4.51□□□□□ -1.69
Sptbn1-202ENSMUST00000011877 Krtap19-5O08632 62 aa4.5□□□□□ -1.69
Sptbn1-202ENSMUST00000011877 Nf1Q04690 2841 aa4.49□□□□□ -1.69
Sptbn1-202ENSMUST00000011877 Megf8P60882 2789 aa4.49□□□□□ -1.69
Sptbn1-202ENSMUST00000011877 Adgrg4B7ZCC9 3073 aa4.47□□□□□ -1.69
Sptbn1-202ENSMUST00000011877 Krtap8-1O08633 61 aa4.46□□□□□ -1.7
Sptbn1-202ENSMUST00000011877 Lrrc37aB1AWG4 3215 aa4.44□□□□□ -1.7
Sptbn1-202ENSMUST00000011877 Brca2P97929 3329 aa4.43□□□□□ -1.7
Sptbn1-202ENSMUST00000011877 NbeaQ9EPN1 2936 aa4.43□□□□□ -1.7
Sptbn1-202ENSMUST00000011877 Col6a3E9PWQ3 3284 aa4.4□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 SpegQ62407 3262 aa4.4□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Sprr2gO70558 76 aa4.39□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Szt2A2A9C3 3431 aa4.38□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Tenm2Q9WTS5 2764 aa4.36□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Gm11939A2A592 99 aa4.35□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Celsr2Q9R0M0 2920 aa4.34□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Dchs2A0A0A6YW72 3346 aa4.34□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Akap9Q70FJ1 3797 aa4.34□□□□□ -1.71
Sptbn1-202ENSMUST00000011877 Tenm3Q9WTS6 2715 aa4.34□□□□□ -1.72
Sptbn1-202ENSMUST00000011877 Gm18596A0A1W2P860 280 aa4.28□□□□□ -1.73
Sptbn1-202ENSMUST00000011877 Krtap3-1A2A591 98 aa4.27□□□□□ -1.73
Sptbn1-202ENSMUST00000011877 Krtap7-1Q9D3I6 87 aa4.26□□□□□ -1.73
Sptbn1-202ENSMUST00000011877 Dchs1E9PVD3 3291 aa4.26□□□□□ -1.73
Sptbn1-202ENSMUST00000011877 VwfQ8CIZ8 2813 aa4.24□□□□□ -1.73
Sptbn1-202ENSMUST00000011877 Krtap19-9aF8WH65 55 aa4.23□□□□□ -1.73
Sptbn1-202ENSMUST00000011877 Vps13cQ8BX70 3748 aa4.2□□□□□ -1.74
Sptbn1-202ENSMUST00000011877 DmdP11531 3678 aa4.16□□□□□ -1.74
Sptbn1-202ENSMUST00000011877 VcanQ62059 3357 aa4.15□□□□□ -1.75
Sptbn1-202ENSMUST00000011877 Gm19402J3QJV4 266 aa4.15□□□□□ -1.75
Sptbn1-202ENSMUST00000011877 OtogO55225 2910 aa4.12□□□□□ -1.75
Sptbn1-202ENSMUST00000011877 Smg1Q8BKX6 3658 aaKnown RBP4.11□□□□□ -1.75
Sptbn1-202ENSMUST00000011877 Helz2E9QAM5 2947 aaKnown RBP4.1□□□□□ -1.75
Sptbn1-202ENSMUST00000011877 LorP18165 486 aa4.09□□□□□ -1.76
Sptbn1-202ENSMUST00000011877 Krtap19-9bQ99NG9 58 aa4.09□□□□□ -1.76
Sptbn1-202ENSMUST00000011877 Muc5acE9QAQ8 3455 aa4.08□□□□□ -1.76
Sptbn1-202ENSMUST00000011877 Krtap1-5A2A590 122 aa4.08□□□□□ -1.76
Sptbn1-202ENSMUST00000011877 Wdfy3Q6VNB8 3508 aa4.07□□□□□ -1.76
Sptbn1-202ENSMUST00000011877 Csmd1Q923L3 3564 aa4.03□□□□□ -1.76
Sptbn1-202ENSMUST00000011877 2310046K23RikA0A0A6YVW6 87 aa4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Sprr2a3Q4KL71 83 aa4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Sprr2a1Q9CQK8 83 aa4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Krtap3-2Q9D638 99 aa4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Krtap3-3Q9D7P0 99 aa4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Krtap1-4Q3V2D6 188 aa4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 SpenQ62504 3644 aaKnown RBP4.02□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Cmya5Q70KF4 3739 aa4□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Zfhx4Q9JJN2 3550 aa3.97□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 RelnQ60841 3461 aa3.97□□□□□ -1.77
Sptbn1-202ENSMUST00000011877 Lce3bQ9CQM7 98 aa3.96□□□□□ -1.78
Sptbn1-202ENSMUST00000011877 Ank2Q8C8R3 3898 aa3.94□□□□□ -1.78
Sptbn1-202ENSMUST00000011877 Krtap12-1Q9Z287 130 aa3.93□□□□□ -1.78
Sptbn1-202ENSMUST00000011877 Huwe1Q7TMY8 4377 aaKnown RBP3.89□□□□□ -1.79
Sptbn1-202ENSMUST00000011877 Col7a1Q63870 2944 aa3.88□□□□□ -1.79
Sptbn1-202ENSMUST00000011877 Lce3cQ91V05 98 aa3.87□□□□□ -1.79
Sptbn1-202ENSMUST00000011877 Csmd2V9GX34 3611 aa3.87□□□□□ -1.79
Sptbn1-202ENSMUST00000011877 Fbn1Q61554 2873 aaKnown RBP3.85□□□□□ -1.79
Sptbn1-202ENSMUST00000011877 Sprr2iO70560 76 aa3.83□□□□□ -1.8
Sptbn1-202ENSMUST00000011877 Sprr2fO70557 76 aa3.83□□□□□ -1.8
Sptbn1-202ENSMUST00000011877 Lce1mQ9CR91 182 aa3.82□□□□□ -1.8
Sptbn1-202ENSMUST00000011877 Lama5Q61001 3718 aa3.81□□□□□ -1.8
Sptbn1-202ENSMUST00000011877 Muc6Q80T03 2850 aa3.79□□□□□ -1.8
Sptbn1-202ENSMUST00000011877 Lce3dE9Q8V1 98 aa3.75□□□□□ -1.81
Sptbn1-202ENSMUST00000011877 Lce3eF8VQJ0 98 aa3.72□□□□□ -1.81
Sptbn1-202ENSMUST00000011877 Lce3fQ6PAI4 98 aa3.72□□□□□ -1.81
Sptbn1-202ENSMUST00000011877 Gm38119A0A0A6YX29 146 aa3.71□□□□□ -1.82
Sptbn1-202ENSMUST00000011877 Gm884A2A9H6 3643 aa3.69□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms