RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Gm28230A0A0A0MQ91 144 aa3.34□□□□□ -1.87
Nck1-201ENSMUST00000112874 Smim37Q8BT35 56 aa3.33□□□□□ -1.88
Nck1-201ENSMUST00000112874 Unc80Q8BLN6 3261 aa3.32□□□□□ -1.88
Nck1-201ENSMUST00000112874 Defb30Q30KN4 75 aa3.32□□□□□ -1.88
Nck1-201ENSMUST00000112874 CrebbpP45481 2441 aa3.32□□□□□ -1.88
Nck1-201ENSMUST00000112874 TrioQ0KL02 3102 aa3.31□□□□□ -1.88
Nck1-201ENSMUST00000112874 Gm5767A0A0J9YTU8 78 aa3.3□□□□□ -1.88
Nck1-201ENSMUST00000112874 Krtap10-10A0A1W2P7T6 217 aa3.3□□□□□ -1.88
Nck1-201ENSMUST00000112874 Defb36Q8K3U4 67 aa3.3□□□□□ -1.88
Nck1-201ENSMUST00000112874 PcntP48725 2898 aa3.3□□□□□ -1.88
Nck1-201ENSMUST00000112874 Gm36368A0A1D5RLK8 91 aa3.29□□□□□ -1.88
Nck1-201ENSMUST00000112874 Jmjd1cQ69ZK6 2350 aa3.29□□□□□ -1.88
Nck1-201ENSMUST00000112874 Krtap9-3Q3V2C1 136 aa3.29□□□□□ -1.88
Nck1-201ENSMUST00000112874 Pkd1l2Q7TN88 2461 aa3.28□□□□□ -1.88
Nck1-201ENSMUST00000112874 Gm9955Q8CEJ8 102 aa3.28□□□□□ -1.88
Nck1-201ENSMUST00000112874 Gm10272F7CZ33 110 aa3.27□□□□□ -1.89
Nck1-201ENSMUST00000112874 Spint3Q3UW09 88 aa3.27□□□□□ -1.89
Nck1-201ENSMUST00000112874 AspmQ8CJ27 3122 aa3.27□□□□□ -1.89
Nck1-201ENSMUST00000112874 Cacna1gQ5SUF7 2381 aa3.27□□□□□ -1.89
Nck1-201ENSMUST00000112874 Gvin1Q80SU7 2427 aa3.27□□□□□ -1.89
Nck1-201ENSMUST00000112874 Itpr1P11881 2749 aa3.26□□□□□ -1.89
Nck1-201ENSMUST00000112874 Lrrc37aB1AWG4 3215 aa3.26□□□□□ -1.89
Nck1-201ENSMUST00000112874 AtrxQ61687 2476 aaKnown RBP3.26□□□□□ -1.89
Nck1-201ENSMUST00000112874 Col6a6Q8C6K9 2265 aa3.25□□□□□ -1.89
Nck1-201ENSMUST00000112874 Rev3lQ61493 3122 aa3.25□□□□□ -1.89
Nck1-201ENSMUST00000112874 Akap13E9Q394 2776 aa3.25□□□□□ -1.89
Nck1-201ENSMUST00000112874 Rif1Q6PR54 2419 aaKnown RBP3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 Usmg5Q78IK2 58 aa3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 SrcapA0A087WQ44 3271 aa3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 Zfhx2Q2MHN3 2562 aa3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 Brca2P97929 3329 aa3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 1700018G05RikA0A1B0GSI2 66 aa3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 Wfdc15bQ9JHY4 80 aa3.24□□□□□ -1.89
Nck1-201ENSMUST00000112874 PtprqP0C5E4 2300 aa3.23□□□□□ -1.89
Nck1-201ENSMUST00000112874 Notch2O35516 2470 aa3.23□□□□□ -1.89
Nck1-201ENSMUST00000112874 CntrlA2AL36 2334 aa3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 Cnot1Q6ZQ08 2375 aaKnown RBP3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 SpegQ62407 3262 aa3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 Spg11Q3UHA3 2430 aa3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 Gm11564A2A4L9 201 aa3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 Defb41Q30KP6 65 aa3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 Cspg4Q8VHY0 2327 aa3.22□□□□□ -1.89
Nck1-201ENSMUST00000112874 Gcn1E9PVA8 2671 aaKnown RBP3.21□□□□□ -1.9
Nck1-201ENSMUST00000112874 OtoglF7A4A7 2325 aa3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 Mt3P28184 68 aa3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 Wfdc18P62810 74 aa3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 Cox14Q8BH51 57 aa3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 Hectd1Q69ZR2 2618 aaKnown RBP3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 FlnbQ80X90 2602 aaKnown RBP3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 Usp24B1AY13 2617 aaKnown RBP3.2□□□□□ -1.9
Nck1-201ENSMUST00000112874 Cdh23Q99PF4 3354 aa3.19□□□□□ -1.9
Nck1-201ENSMUST00000112874 Sptbn4E9PX29 2561 aa3.19□□□□□ -1.9
Nck1-201ENSMUST00000112874 Sprr1aQ62266 144 aa3.19□□□□□ -1.9
Nck1-201ENSMUST00000112874 2010109I03RikQ9CQ11 111 aa3.19□□□□□ -1.9
Nck1-201ENSMUST00000112874 2310079G19RikQ9D6L6 185 aa3.19□□□□□ -1.9
Nck1-201ENSMUST00000112874 Col12a1Q60847 3120 aa3.18□□□□□ -1.9
Nck1-201ENSMUST00000112874 KalrnA2CG49 2964 aa3.18□□□□□ -1.9
Nck1-201ENSMUST00000112874 Nav3Q80TN7 2359 aa3.18□□□□□ -1.9
Nck1-201ENSMUST00000112874 Ptprz1B9EKR1 2312 aa3.18□□□□□ -1.9
Nck1-201ENSMUST00000112874 Wfdc5Q4KXB6 126 aa3.18□□□□□ -1.9
Nck1-201ENSMUST00000112874 Dnah12Q3V0Q1 3086 aa3.18□□□□□ -1.9
Nck1-201ENSMUST00000112874 Chd7A2AJK6 2986 aaKnown RBP3.17□□□□□ -1.9
Nck1-201ENSMUST00000112874 FryE9Q8I9 3020 aa3.17□□□□□ -1.9
Nck1-201ENSMUST00000112874 Cacna1bO55017 2327 aa3.16□□□□□ -1.9
Nck1-201ENSMUST00000112874 Gm17606F6ZL36 78 aa3.16□□□□□ -1.9
Nck1-201ENSMUST00000112874 1600014C23RikQ9DAX4 101 aa3.16□□□□□ -1.9
Nck1-201ENSMUST00000112874 Wfdc12Q9JHY3 85 aa3.16□□□□□ -1.9
Nck1-201ENSMUST00000112874 Cfap46E9Q2C0 2641 aa3.16□□□□□ -1.9
Nck1-201ENSMUST00000112874 CenpfE9Q3P4 2997 aaKnown RBP3.15□□□□□ -1.91
Nck1-201ENSMUST00000112874 Vps13aQ5H8C4 3166 aa3.15□□□□□ -1.91
Nck1-201ENSMUST00000112874 Col6a4A2AX52 2309 aa3.15□□□□□ -1.91
Nck1-201ENSMUST00000112874 Tomm7Q9D173 55 aa3.14□□□□□ -1.91
Nck1-201ENSMUST00000112874 Map1bP14873 2464 aaKnown RBP3.14□□□□□ -1.91
Nck1-201ENSMUST00000112874 TprF6ZDS4 2431 aaKnown RBP3.14□□□□□ -1.91
Nck1-201ENSMUST00000112874 Tnrc18Q80WC3 2878 aa3.14□□□□□ -1.91
Nck1-201ENSMUST00000112874 Gm11562A0PK51 136 aa3.14□□□□□ -1.91
Nck1-201ENSMUST00000112874 Spink1P09036 80 aa3.14□□□□□ -1.91
Nck1-201ENSMUST00000112874 AcacbE9Q4Z2 2448 aa3.13□□□□□ -1.91
Nck1-201ENSMUST00000112874 D6Ertd527eA0A0N4SWI3 464 aa3.13□□□□□ -1.91
Nck1-201ENSMUST00000112874 Prp2P05143 317 aa3.13□□□□□ -1.91
Nck1-201ENSMUST00000112874 Defb1P56386 69 aa3.13□□□□□ -1.91
Nck1-201ENSMUST00000112874 Spag11Q8K4N2 71 aa3.13□□□□□ -1.91
Nck1-201ENSMUST00000112874 Dchs2A0A0A6YW72 3346 aa3.13□□□□□ -1.91
Nck1-201ENSMUST00000112874 Lrrk2Q5S006 2527 aa3.12□□□□□ -1.91
Nck1-201ENSMUST00000112874 Gm10999F6Q4M4 69 aa3.12□□□□□ -1.91
Nck1-201ENSMUST00000112874 Myo9aQ8C170 2542 aa3.12□□□□□ -1.91
Nck1-201ENSMUST00000112874 CenpeQ6RT24 2474 aaKnown RBP3.11□□□□□ -1.91
Nck1-201ENSMUST00000112874 NbdyA0A0N4SUI7 68 aa3.11□□□□□ -1.91
Nck1-201ENSMUST00000112874 Spta1P08032 2415 aa3.1□□□□□ -1.91
Nck1-201ENSMUST00000112874 Gm40460A0A1B0GR10 244 aa3.1□□□□□ -1.91
Nck1-201ENSMUST00000112874 VcanQ62059 3357 aa3.1□□□□□ -1.91
Nck1-201ENSMUST00000112874 Dmxl1Q6PNC0 3013 aa3.09□□□□□ -1.91
Nck1-201ENSMUST00000112874 Epg5Q80TA9 2572 aa3.09□□□□□ -1.91
Nck1-201ENSMUST00000112874 Sec16aA2AIX1 2377 aa3.09□□□□□ -1.92
Nck1-201ENSMUST00000112874 Krtap1-4Q3V2D6 188 aa3.08□□□□□ -1.92
Nck1-201ENSMUST00000112874 FrylF8VQ05 3007 aa3.08□□□□□ -1.92
Nck1-201ENSMUST00000112874 Itpr3P70227 2670 aa3.07□□□□□ -1.92
Nck1-201ENSMUST00000112874 Helz2E9QAM5 2947 aaKnown RBP3.06□□□□□ -1.92
Nck1-201ENSMUST00000112874 Nbeal1E9PYP2 2688 aa3.06□□□□□ -1.92
Nck1-201ENSMUST00000112874 Ep300B2RWS6 2412 aa3.06□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms