RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Fam19a3Q7TPG6 132 aa9.88□□□□□ -0.83
Vcan-201ENSMUST00000109543 Defa27F2Z403 93 aa9.87□□□□□ -0.83
Vcan-201ENSMUST00000109543 U90926O08546 118 aa9.87□□□□□ -0.83
Vcan-201ENSMUST00000109543 Gm10401E9Q3K6 71 aa9.87□□□□□ -0.83
Vcan-201ENSMUST00000109543 SvipQ3UZP4 77 aa9.87□□□□□ -0.83
Vcan-201ENSMUST00000109543 Defa28D3Z1V9 94 aa9.85□□□□□ -0.83
Vcan-201ENSMUST00000109543 Scgb1b2O35176 93 aa9.84□□□□□ -0.83
Vcan-201ENSMUST00000109543 Zcchc13Q9D548 170 aa9.84□□□□□ -0.83
Vcan-201ENSMUST00000109543 Stab2Q8R4U0 2559 aa9.84□□□□□ -0.83
Vcan-201ENSMUST00000109543 Ndufc1Q9CQY9 76 aa9.83□□□□□ -0.84
Vcan-201ENSMUST00000109543 Gm17521F6QAC8 156 aa9.82□□□□□ -0.84
Vcan-201ENSMUST00000109543 Nupr2Q497P3 102 aa9.82□□□□□ -0.84
Vcan-201ENSMUST00000109543 C130032M10RikQ8C888 123 aa9.82□□□□□ -0.84
Vcan-201ENSMUST00000109543 GhrhP16043 103 aa9.81□□□□□ -0.84
Vcan-201ENSMUST00000109543 B230307C23RikQ8BLB2 64 aa9.8□□□□□ -0.84
Vcan-201ENSMUST00000109543 Mrpl34Q99N91 92 aa9.8□□□□□ -0.84
Vcan-201ENSMUST00000109543 Phf5aP83870 110 aaKnown RBP9.79□□□□□ -0.84
Vcan-201ENSMUST00000109543 Muc6Q80T03 2850 aa9.79□□□□□ -0.84
Vcan-201ENSMUST00000109543 Tenm2Q9WTS5 2764 aa9.78□□□□□ -0.84
Vcan-201ENSMUST00000109543 Gm44790A0A0N4SV91 103 aa9.78□□□□□ -0.84
Vcan-201ENSMUST00000109543 Igkv3-4A0A140T8Q4 119 aa9.78□□□□□ -0.84
Vcan-201ENSMUST00000109543 1700018G05RikA0A1B0GSI2 66 aa9.78□□□□□ -0.84
Vcan-201ENSMUST00000109543 Wfdc13Q5DQQ6 81 aa9.78□□□□□ -0.84
Vcan-201ENSMUST00000109543 Dnah11E9Q7N9 4488 aa9.78□□□□□ -0.84
Vcan-201ENSMUST00000109543 Gm12353A2AGJ4 60 aa9.76□□□□□ -0.85
Vcan-201ENSMUST00000109543 Prr15lQ8JZM2 100 aa9.76□□□□□ -0.85
Vcan-201ENSMUST00000109543 1700012A03RikQ9DAF1 130 aa9.76□□□□□ -0.85
Vcan-201ENSMUST00000109543 Gm10139O88245 57 aa9.75□□□□□ -0.85
Vcan-201ENSMUST00000109543 BikO70337 150 aa9.74□□□□□ -0.85
Vcan-201ENSMUST00000109543 Gm9507D3Z5T3 223 aa9.74□□□□□ -0.85
Vcan-201ENSMUST00000109543 Wfdc10Q3V2J9 124 aa9.73□□□□□ -0.85
Vcan-201ENSMUST00000109543 Dnah9B1AR51 4484 aa9.73□□□□□ -0.85
Vcan-201ENSMUST00000109543 Plac8Q9JI48 112 aa9.73□□□□□ -0.85
Vcan-201ENSMUST00000109543 Tmem258P61166 79 aa9.72□□□□□ -0.85
Vcan-201ENSMUST00000109543 Fras1Q80T14 4010 aa9.72□□□□□ -0.85
Vcan-201ENSMUST00000109543 Gm37013Q8K491 104 aa9.71□□□□□ -0.85
Vcan-201ENSMUST00000109543 Pkd1l1Q8R526 2615 aa9.71□□□□□ -0.86
Vcan-201ENSMUST00000109543 Q8BT88 171 aa9.71□□□□□ -0.86
Vcan-201ENSMUST00000109543 Defb9Q8R2I6 67 aa9.71□□□□□ -0.86
Vcan-201ENSMUST00000109543 PrkdcP97313 4128 aa9.7□□□□□ -0.86
Vcan-201ENSMUST00000109543 Odf3bQ5M8M2 238 aa9.7□□□□□ -0.86
Vcan-201ENSMUST00000109543 UqcrqQ9CQ69 82 aa9.7□□□□□ -0.86
Vcan-201ENSMUST00000109543 Igkv8-19A0A0G2JFN8 121 aa9.68□□□□□ -0.86
Vcan-201ENSMUST00000109543 AI606181Q8C7B9 129 aa9.68□□□□□ -0.86
Vcan-201ENSMUST00000109543 Ube2aQ9Z255 152 aa9.68□□□□□ -0.86
Vcan-201ENSMUST00000109543 PlecQ9QXS1 4691 aaKnown RBP9.67□□□□□ -0.86
Vcan-201ENSMUST00000109543 Gm19935A0A1B0GSF9 52 aa9.66□□□□□ -0.86
Vcan-201ENSMUST00000109543 Gm21886J3QJU9 214 aa9.66□□□□□ -0.86
Vcan-201ENSMUST00000109543 HrnrQ8VHD8 2496 aa9.66□□□□□ -0.86
Vcan-201ENSMUST00000109543 Gm28230A0A0A0MQ91 144 aa9.65□□□□□ -0.86
Vcan-201ENSMUST00000109543 Igkv3-7A0A0G2JE31 119 aa9.65□□□□□ -0.86
Vcan-201ENSMUST00000109543 Igkv3-10A0A0G2JGN0 119 aa9.65□□□□□ -0.86
Vcan-201ENSMUST00000109543 Gm9918Q8BUR5 174 aa9.65□□□□□ -0.87
Vcan-201ENSMUST00000109543 6030445D17RikE9Q8F9 148 aa9.64□□□□□ -0.87
Vcan-201ENSMUST00000109543 Spink8Q09TK9 105 aa9.64□□□□□ -0.87
Vcan-201ENSMUST00000109543 Chchd10Q7TNL9 138 aa9.64□□□□□ -0.87
Vcan-201ENSMUST00000109543 Gm10065F6TJM2 114 aa9.62□□□□□ -0.87
Vcan-201ENSMUST00000109543 Gm10570F6VB42 170 aa9.62□□□□□ -0.87
Vcan-201ENSMUST00000109543 Igkv3-5A0A140T8M6 119 aa9.6□□□□□ -0.87
Vcan-201ENSMUST00000109543 Gm27235Q3UW50 83 aa9.59□□□□□ -0.87
Vcan-201ENSMUST00000109543 Reg3aO09037 175 aa9.59□□□□□ -0.87
Vcan-201ENSMUST00000109543 Gm10642Q3TWM1 71 aa9.59□□□□□ -0.87
Vcan-201ENSMUST00000109543 Krtap29-1A2A5X4 342 aa9.58□□□□□ -0.88
Vcan-201ENSMUST00000109543 Rps28P62858 69 aaKnown RBP9.58□□□□□ -0.88
Vcan-201ENSMUST00000109543 SnurfQ9WU12 71 aa9.57□□□□□ -0.88
Vcan-201ENSMUST00000109543 FasnP19096 2504 aaKnown RBP9.57□□□□□ -0.88
Vcan-201ENSMUST00000109543 Q8K1L6 76 aa9.56□□□□□ -0.88
Vcan-201ENSMUST00000109543 Defb11Q8R2I7 77 aa9.56□□□□□ -0.88
Vcan-201ENSMUST00000109543 Samd13D3YUG0 102 aa9.55□□□□□ -0.88
Vcan-201ENSMUST00000109543 Rpl37aP61514 92 aa9.53□□□□□ -0.88
Vcan-201ENSMUST00000109543 2310050C09RikG5E8Z3 280 aa9.51□□□□□ -0.89
Vcan-201ENSMUST00000109543 Brk1Q91VR8 75 aa9.5□□□□□ -0.89
Vcan-201ENSMUST00000109543 Ly6g6cQ9Z1Q4 126 aa9.5□□□□□ -0.89
Vcan-201ENSMUST00000109543 Adm2Q7TNK8 150 aa9.5□□□□□ -0.89
Vcan-201ENSMUST00000109543 Smlr1J3QMJ4 66 aa9.49□□□□□ -0.89
Vcan-201ENSMUST00000109543 Pet100P0DJE0 76 aa9.48□□□□□ -0.89
Vcan-201ENSMUST00000109543 1600014C23RikQ9DAX4 101 aa9.48□□□□□ -0.89
Vcan-201ENSMUST00000109543 A0A286YE49 62 aa9.47□□□□□ -0.89
Vcan-201ENSMUST00000109543 Gm20604F8WIA3 75 aa9.47□□□□□ -0.89
Vcan-201ENSMUST00000109543 NbdyA0A0N4SUI7 68 aa9.46□□□□□ -0.9
Vcan-201ENSMUST00000109543 FcgbpE9Q0B5 2583 aa9.45□□□□□ -0.9
Vcan-201ENSMUST00000109543 Coa6Q8BGD8 79 aa9.44□□□□□ -0.9
Vcan-201ENSMUST00000109543 Serp1Q9Z1W5 66 aa9.43□□□□□ -0.9
Vcan-201ENSMUST00000109543 Dnah5Q8VHE6 4621 aa9.43□□□□□ -0.9
Vcan-201ENSMUST00000109543 Krtap10-4Q08EG8 221 aa9.41□□□□□ -0.9
Vcan-201ENSMUST00000109543 Defb12Q8K4N3 78 aa9.4□□□□□ -0.9
Vcan-201ENSMUST00000109543 Anapc11Q9CPX9 84 aa9.4□□□□□ -0.9
Vcan-201ENSMUST00000109543 Spint4Q9D263 159 aa9.4□□□□□ -0.9
Vcan-201ENSMUST00000109543 Gm2310J3QNJ2 377 aa9.4□□□□□ -0.9
Vcan-201ENSMUST00000109543 Dnah7aE9Q0T8 4024 aa9.4□□□□□ -0.91
Vcan-201ENSMUST00000109543 Dnah7cA0A087WR13 4024 aa9.39□□□□□ -0.91
Vcan-201ENSMUST00000109543 Gpr15lA0A0B4J1N3 78 aa9.38□□□□□ -0.91
Vcan-201ENSMUST00000109543 Znf706Q9D115 76 aaKnown RBP9.38□□□□□ -0.91
Vcan-201ENSMUST00000109543 1700074P13RikQ9D9G7 251 aa9.38□□□□□ -0.91
Vcan-201ENSMUST00000109543 Atox1O08997 68 aaKnown RBP9.37□□□□□ -0.91
Vcan-201ENSMUST00000109543 Cypt14J3QPF7 87 aa9.37□□□□□ -0.91
Vcan-201ENSMUST00000109543 Tnp2P11378 117 aa9.36□□□□□ -0.91
Vcan-201ENSMUST00000109543 Krtap14O08640 167 aa9.34□□□□□ -0.91
Vcan-201ENSMUST00000109543 Defb39Q70KL3 74 aa9.33□□□□□ -0.92
Vcan-201ENSMUST00000109543 Gm28374F6SG70 93 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 216.9 ms