RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Gm42715A0A087WP63 3095 aaKnown RBP6.59□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Defb9Q8R2I6 67 aa6.58□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Odf3bQ5M8M2 238 aa6.58□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Spink7Q6IE32 76 aa6.58□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Pkd1l1Q8R526 2615 aa6.56□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Nbeal2Q6ZQA0 2742 aa6.56□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Ubr5Q80TP3 2792 aa6.55□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Jbts17Q8CE72 3214 aa6.55□□□□□ -1.36
Col6a3-201ENSMUST00000056925 AW011738F6S7Q2 159 aa6.53□□□□□ -1.36
Col6a3-201ENSMUST00000056925 ApcQ61315 2845 aa6.53□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Itpr1P11881 2749 aa6.53□□□□□ -1.36
Col6a3-201ENSMUST00000056925 Dnah12Q3V0Q1 3086 aa6.52□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Gm10382Q3V0T5 144 aa6.51□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Sec61bQ9CQS8 96 aaKnown RBP6.5□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Fam229aB2KGE5 128 aa6.5□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Ndufaf8A2AMZ4 74 aa6.49□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Rpl37Q9D823 97 aa6.48□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Itpr2Q9Z329 2701 aa6.47□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Gm10320E9PW43 113 aa6.46□□□□□ -1.37
Col6a3-201ENSMUST00000056925 Tex15F8VPN2 2785 aa6.46□□□□□ -1.38
Col6a3-201ENSMUST00000056925 Gm9112A2AI92 75 aa6.44□□□□□ -1.38
Col6a3-201ENSMUST00000056925 Ash1lQ99MY8 2958 aa6.43□□□□□ -1.38
Col6a3-201ENSMUST00000056925 Gm3285A0A1W2P7U0 201 aa6.42□□□□□ -1.38
Col6a3-201ENSMUST00000056925 DspE9Q557 2883 aaKnown RBP6.41□□□□□ -1.38
Col6a3-201ENSMUST00000056925 Plac8Q9JI48 112 aa6.39□□□□□ -1.39
Col6a3-201ENSMUST00000056925 NbdyA0A0N4SUI7 68 aa6.37□□□□□ -1.39
Col6a3-201ENSMUST00000056925 Cep350E9Q309 3095 aa6.36□□□□□ -1.39
Col6a3-201ENSMUST00000056925 A730071L15RikQ8C4X0 137 aa6.35□□□□□ -1.39
Col6a3-201ENSMUST00000056925 Gm10139O88245 57 aa6.35□□□□□ -1.39
Col6a3-201ENSMUST00000056925 Gm10065F6TJM2 114 aa6.35□□□□□ -1.39
Col6a3-201ENSMUST00000056925 Tnrc18Q80WC3 2878 aa6.34□□□□□ -1.39
Col6a3-201ENSMUST00000056925 Gm3250E9Q1M3 230 aa6.33□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Lama2Q60675 3118 aaKnown RBP6.32□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Prune2Q52KR3 3084 aa6.31□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Srrm2Q8BTI8 2703 aaKnown RBP6.3□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Dmxl1Q6PNC0 3013 aa6.3□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Cox6b2Q80ZN9 88 aa6.3□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Bod1lE9Q6J5 3032 aa6.3□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Ep400Q8CHI8 3072 aaKnown RBP6.29□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Hivep1Q03172 2688 aa6.29□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Muc2Q80Z19 2680 aa6.28□□□□□ -1.4
Col6a3-201ENSMUST00000056925 KalrnA2CG49 2964 aa6.28□□□□□ -1.4
Col6a3-201ENSMUST00000056925 Gm21887J3QQ04 176 aa6.25□□□□□ -1.41
Col6a3-201ENSMUST00000056925 Zzef1Q5SSH7 2924 aa6.25□□□□□ -1.41
Col6a3-201ENSMUST00000056925 Fbn2Q61555 2907 aa6.24□□□□□ -1.41
Col6a3-201ENSMUST00000056925 Gm19426M0QWC7 77 aa6.24□□□□□ -1.41
Col6a3-201ENSMUST00000056925 Gm16253D3Z167 63 aa6.22□□□□□ -1.41
Col6a3-201ENSMUST00000056925 Krtap14O08640 167 aa6.22□□□□□ -1.41
Col6a3-201ENSMUST00000056925 TgO08710 2766 aa6.21□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Ranbp2Q9ERU9 3053 aaKnown RBP6.21□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Krtap15-1Q9QZU5 150 aa6.2□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Sprr1aQ62266 144 aa6.18□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Igfn1Q3KNY0 2849 aa6.18□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Prm2P07978 107 aa6.18□□□□□ -1.42
Col6a3-201ENSMUST00000056925 FcgbpE9Q0B5 2583 aa6.17□□□□□ -1.42
Col6a3-201ENSMUST00000056925 OxtP35454 125 aa6.16□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Chd7A2AJK6 2986 aaKnown RBP6.15□□□□□ -1.42
Col6a3-201ENSMUST00000056925 Gm2310J3QNJ2 377 aa6.15□□□□□ -1.43
Col6a3-201ENSMUST00000056925 FrylF8VQ05 3007 aa6.14□□□□□ -1.43
Col6a3-201ENSMUST00000056925 2310050C09RikG5E8Z3 280 aa6.14□□□□□ -1.43
Col6a3-201ENSMUST00000056925 UtrnE9Q6R7 3430 aa6.12□□□□□ -1.43
Col6a3-201ENSMUST00000056925 BC029722A0A0N4SW31 51 aa6.12□□□□□ -1.43
Col6a3-201ENSMUST00000056925 MgaA2AWL7 3003 aaKnown RBP6.12□□□□□ -1.43
Col6a3-201ENSMUST00000056925 Gm40193A0A1B0GT39 78 aa6.08□□□□□ -1.44
Col6a3-201ENSMUST00000056925 Gm17349F7BGH6 99 aa6.08□□□□□ -1.44
Col6a3-201ENSMUST00000056925 Krtap13O88375 197 aa6.07□□□□□ -1.44
Col6a3-201ENSMUST00000056925 TrioQ0KL02 3102 aa6.06□□□□□ -1.44
Col6a3-201ENSMUST00000056925 Vps13aQ5H8C4 3166 aa6.04□□□□□ -1.44
Col6a3-201ENSMUST00000056925 LrbaQ9ESE1 2856 aa6.03□□□□□ -1.44
Col6a3-201ENSMUST00000056925 Nf1Q04690 2841 aa6.02□□□□□ -1.44
Col6a3-201ENSMUST00000056925 BptfA2A654 3036 aaKnown RBP6.02□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Gm3233E9Q2H5 230 aa6.02□□□□□ -1.45
Col6a3-201ENSMUST00000056925 FlncQ8VHX6 2726 aaKnown RBP6.02□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Gm5767A0A0J9YTU8 78 aa6.01□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Krtap29-1A2A5X4 342 aa5.99□□□□□ -1.45
Col6a3-201ENSMUST00000056925 FryE9Q8I9 3020 aa5.99□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Pdzd2E9Q1M1 2796 aa5.99□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Chd9Q8BYH8 2885 aa5.97□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Tenm1Q9WTS4 2731 aa5.97□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Gm9508A0A1W2P7W0 230 aa5.97□□□□□ -1.45
Col6a3-201ENSMUST00000056925 Tnp1P10856 55 aa5.94□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Lama1P19137 3084 aa5.94□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Gm7138L7N2C3 230 aa5.92□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Gm3238W4VSP7 230 aa5.92□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Frem2Q6NVD0 3160 aa5.92□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Celsr2Q9R0M0 2920 aa5.92□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Tenm3Q9WTS6 2715 aa5.9□□□□□ -1.46
Col6a3-201ENSMUST00000056925 Myo15bI7HPW8 3033 aa5.9□□□□□ -1.47
Col6a3-201ENSMUST00000056925 NbeaQ9EPN1 2936 aa5.89□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Cfap54Q8C6S9 3106 aa5.89□□□□□ -1.47
Col6a3-201ENSMUST00000056925 D6Ertd527eA0A0N4SWI3 464 aa5.89□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Mki67E9PVX6 3177 aaKnown RBP5.89□□□□□ -1.47
Col6a3-201ENSMUST00000056925 2310057N15RikQ9D6T8 200 aa5.89□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Gm5965D3Z724 196 aa5.88□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Trank1Q8BV79 2999 aa5.87□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Gm7173A0A0G2JEB6 3132 aa5.87□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Lelp1Q9DAE3 120 aa5.86□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Dmxl2Q8BPN8 3032 aa5.86□□□□□ -1.47
Col6a3-201ENSMUST00000056925 Gm7137J3QMW1 236 aa5.85□□□□□ -1.47
Col6a3-201ENSMUST00000056925 AtmQ62388 3066 aa5.84□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 125.3 ms