RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 NbdyA0A0N4SUI7 68 aa5.49□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Gm10320E9PW43 113 aa5.49□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Sec61bQ9CQS8 96 aaKnown RBP5.49□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Rpl37Q9D823 97 aa5.49□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Jbts17Q8CE72 3214 aa5.47□□□□□ -1.53
Polr1a-201ENSMUST00000055296 1700042G07RikB1AUF7 90 aa5.46□□□□□ -1.54
Polr1a-201ENSMUST00000055296 Gm9195A0A140LHT4 2805 aa5.45□□□□□ -1.54
Polr1a-201ENSMUST00000055296 Tep1P97499 2629 aa5.44□□□□□ -1.54
Polr1a-201ENSMUST00000055296 Ep400Q8CHI8 3072 aaKnown RBP5.44□□□□□ -1.54
Polr1a-201ENSMUST00000055296 Gm3646F6S692 53 aa5.43□□□□□ -1.54
Polr1a-201ENSMUST00000055296 BC029722A0A0N4SW31 51 aa5.42□□□□□ -1.54
Polr1a-201ENSMUST00000055296 Gm10065F6TJM2 114 aa5.39□□□□□ -1.55
Polr1a-201ENSMUST00000055296 Gm3233E9Q2H5 230 aa5.38□□□□□ -1.55
Polr1a-201ENSMUST00000055296 Gm37013Q8K491 104 aa5.37□□□□□ -1.55
Polr1a-201ENSMUST00000055296 CenpfE9Q3P4 2997 aaKnown RBP5.36□□□□□ -1.55
Polr1a-201ENSMUST00000055296 Igsf10Q3V1M1 2594 aa5.36□□□□□ -1.55
Polr1a-201ENSMUST00000055296 Gm5767A0A0J9YTU8 78 aa5.34□□□□□ -1.55
Polr1a-201ENSMUST00000055296 Col6a5A6H584 2640 aa5.34□□□□□ -1.55
Polr1a-201ENSMUST00000055296 2310050C09RikG5E8Z3 280 aa5.34□□□□□ -1.55
Polr1a-201ENSMUST00000055296 Cep350E9Q309 3095 aa5.33□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Pkd1l1Q8R526 2615 aa5.33□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Usp34Q6ZQ93 3582 aa5.32□□□□□ -1.56
Polr1a-201ENSMUST00000055296 NipblQ6KCD5 2798 aaKnown RBP5.32□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Stab2Q8R4U0 2559 aa5.32□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Lama3Q61789 3330 aa5.32□□□□□ -1.56
Polr1a-201ENSMUST00000055296 4933415A04RikQ9D443 101 aa5.31□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Gm9508A0A1W2P7W0 230 aa5.31□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Gm7138L7N2C3 230 aa5.31□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Gm3238W4VSP7 230 aa5.31□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Prune2Q52KR3 3084 aa5.3□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Ndufaf8A2AMZ4 74 aa5.29□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Gm7137J3QMW1 236 aa5.28□□□□□ -1.56
Polr1a-201ENSMUST00000055296 Tnrc18Q80WC3 2878 aa5.27□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Gm10139O88245 57 aa5.26□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Itpr3P70227 2670 aa5.26□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Rev3lQ61493 3122 aa5.24□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Gm9112A2AI92 75 aa5.24□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Itpr1P11881 2749 aa5.23□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Utp20Q5XG71 2788 aaKnown RBP5.23□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Cox6b2Q80ZN9 88 aa5.23□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Lama2Q60675 3118 aaKnown RBP5.22□□□□□ -1.57
Polr1a-201ENSMUST00000055296 SmcpP15265 143 aa5.22□□□□□ -1.57
Polr1a-201ENSMUST00000055296 Gm16253D3Z167 63 aa5.19□□□□□ -1.58
Polr1a-201ENSMUST00000055296 Gm11565A2A4M7 156 aa5.19□□□□□ -1.58
Polr1a-201ENSMUST00000055296 Gm21887J3QQ04 176 aa5.18□□□□□ -1.58
Polr1a-201ENSMUST00000055296 Bod1lE9Q6J5 3032 aa5.18□□□□□ -1.58
Polr1a-201ENSMUST00000055296 Cystm1Q8K353 104 aa5.17□□□□□ -1.58
Polr1a-201ENSMUST00000055296 MgaA2AWL7 3003 aaKnown RBP5.17□□□□□ -1.58
Polr1a-201ENSMUST00000055296 Itpr2Q9Z329 2701 aa5.15□□□□□ -1.58
Polr1a-201ENSMUST00000055296 Col12a1Q60847 3120 aa5.14□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Tnp1P10856 55 aa5.14□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Sprr1aQ62266 144 aa5.13□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Myo15bI7HPW8 3033 aa5.13□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Chd7A2AJK6 2986 aaKnown RBP5.12□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Gm7173A0A0G2JEB6 3132 aa5.12□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Gm17349F7BGH6 99 aa5.12□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Cdh23Q99PF4 3354 aa5.11□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Krtap29-1A2A5X4 342 aa5.1□□□□□ -1.59
Polr1a-201ENSMUST00000055296 Gm40193A0A1B0GT39 78 aa5.1□□□□□ -1.59
Polr1a-201ENSMUST00000055296 TrioQ0KL02 3102 aa5.1□□□□□ -1.59
Polr1a-201ENSMUST00000055296 A730071L15RikQ8C4X0 137 aa5.09□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Nbeal2Q6ZQA0 2742 aa5.08□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Tex15F8VPN2 2785 aa5.08□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Krtap13O88375 197 aa5.07□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Ubr5Q80TP3 2792 aa5.07□□□□□ -1.6
Polr1a-201ENSMUST00000055296 ApcQ61315 2845 aa5.06□□□□□ -1.6
Polr1a-201ENSMUST00000055296 KalrnA2CG49 2964 aa5.04□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Lelp1Q9DAE3 120 aa5.04□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Dmxl1Q6PNC0 3013 aa5.04□□□□□ -1.6
Polr1a-201ENSMUST00000055296 Mki67E9PVX6 3177 aaKnown RBP5.03□□□□□ -1.6
Polr1a-201ENSMUST00000055296 HttP42859 3119 aa5.02□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Krtap14O08640 167 aa5.01□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Gm36176A0A1W2P8D5 158 aa5.01□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Fbn2Q61555 2907 aa5.01□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Ranbp2Q9ERU9 3053 aaKnown RBP5□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Szt2A2A9C3 3431 aa4.99□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Ash1lQ99MY8 2958 aa4.97□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Gm2310J3QNJ2 377 aa4.97□□□□□ -1.61
Polr1a-201ENSMUST00000055296 Muc2Q80Z19 2680 aa4.95□□□□□ -1.62
Polr1a-201ENSMUST00000055296 Igfn1Q3KNY0 2849 aa4.94□□□□□ -1.62
Polr1a-201ENSMUST00000055296 Rps29P62274 56 aa4.93□□□□□ -1.62
Polr1a-201ENSMUST00000055296 Zfhx3Q61329 3726 aa4.92□□□□□ -1.62
Polr1a-201ENSMUST00000055296 Hivep1Q03172 2688 aa4.92□□□□□ -1.62
Polr1a-201ENSMUST00000055296 FcgbpE9Q0B5 2583 aa4.91□□□□□ -1.62
Polr1a-201ENSMUST00000055296 Gm9507D3Z5T3 223 aa4.91□□□□□ -1.62
Polr1a-201ENSMUST00000055296 Zzef1Q5SSH7 2924 aa4.88□□□□□ -1.63
Polr1a-201ENSMUST00000055296 2310057N15RikQ9D6T8 200 aa4.88□□□□□ -1.63
Polr1a-201ENSMUST00000055296 Krtap10-4Q08EG8 221 aa4.87□□□□□ -1.63
Polr1a-201ENSMUST00000055296 Srrm2Q8BTI8 2703 aaKnown RBP4.86□□□□□ -1.63
Polr1a-201ENSMUST00000055296 Tnp2P11378 117 aa4.86□□□□□ -1.63
Polr1a-201ENSMUST00000055296 Vps13cQ8BX70 3748 aa4.86□□□□□ -1.63
Polr1a-201ENSMUST00000055296 Gm5965D3Z724 196 aa4.86□□□□□ -1.63
Polr1a-201ENSMUST00000055296 AtmQ62388 3066 aa4.84□□□□□ -1.63
Polr1a-201ENSMUST00000055296 Krtap10-10A0A1W2P7T6 217 aa4.84□□□□□ -1.63
Polr1a-201ENSMUST00000055296 D6Ertd527eA0A0N4SWI3 464 aa4.83□□□□□ -1.64
Polr1a-201ENSMUST00000055296 NbeaQ9EPN1 2936 aa4.83□□□□□ -1.64
Polr1a-201ENSMUST00000055296 Cfap54Q8C6S9 3106 aa4.82□□□□□ -1.64
Polr1a-201ENSMUST00000055296 FlncQ8VHX6 2726 aaKnown RBP4.81□□□□□ -1.64
Polr1a-201ENSMUST00000055296 TgO08710 2766 aa4.79□□□□□ -1.64
Polr1a-201ENSMUST00000055296 BptfA2A654 3036 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms