RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Unc80Q8BLN6 3261 aa10.78□□□□□ -0.68
Col17a1-201ENSMUST00000026045 Ash1lQ99MY8 2958 aa10.78□□□□□ -0.68
Col17a1-201ENSMUST00000026045 AtmQ62388 3066 aa10.78□□□□□ -0.68
Col17a1-201ENSMUST00000026045 CriptO70333 101 aa10.77□□□□□ -0.69
Col17a1-201ENSMUST00000026045 Zcchc13Q9D548 170 aa10.77□□□□□ -0.69
Col17a1-201ENSMUST00000026045 Gpr15lA0A0B4J1N3 78 aa10.76□□□□□ -0.69
Col17a1-201ENSMUST00000026045 AtrQ9JKK8 2635 aa10.73□□□□□ -0.69
Col17a1-201ENSMUST00000026045 KalrnA2CG49 2964 aa10.73□□□□□ -0.69
Col17a1-201ENSMUST00000026045 Defb11Q8R2I7 77 aa10.72□□□□□ -0.69
Col17a1-201ENSMUST00000026045 MgaA2AWL7 3003 aaKnown RBP10.7□□□□□ -0.7
Col17a1-201ENSMUST00000026045 Gm11565A2A4M7 156 aa10.69□□□□□ -0.7
Col17a1-201ENSMUST00000026045 2310034C09RikQ9D746 214 aa10.69□□□□□ -0.7
Col17a1-201ENSMUST00000026045 Usp24B1AY13 2617 aaKnown RBP10.63□□□□□ -0.71
Col17a1-201ENSMUST00000026045 Gm7138L7N2C3 230 aa10.63□□□□□ -0.71
Col17a1-201ENSMUST00000026045 Gm3238W4VSP7 230 aa10.63□□□□□ -0.71
Col17a1-201ENSMUST00000026045 Nsd1O88491 2588 aaKnown RBP10.62□□□□□ -0.71
Col17a1-201ENSMUST00000026045 Lrrc37aB1AWG4 3215 aa10.61□□□□□ -0.71
Col17a1-201ENSMUST00000026045 A730071L15RikQ8C4X0 137 aa10.59□□□□□ -0.71
Col17a1-201ENSMUST00000026045 6030445D17RikE9Q8F9 148 aa10.59□□□□□ -0.71
Col17a1-201ENSMUST00000026045 Notch1Q01705 2531 aa10.59□□□□□ -0.71
Col17a1-201ENSMUST00000026045 Fam104aA2A6P4 185 aa10.58□□□□□ -0.72
Col17a1-201ENSMUST00000026045 FasnP19096 2504 aaKnown RBP10.57□□□□□ -0.72
Col17a1-201ENSMUST00000026045 AspmQ8CJ27 3122 aa10.57□□□□□ -0.72
Col17a1-201ENSMUST00000026045 NipblQ6KCD5 2798 aaKnown RBP10.52□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Gm7137J3QMW1 236 aa10.52□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Celsr3Q91ZI0 3301 aa10.51□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Defb9Q8R2I6 67 aa10.51□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Gm37013Q8K491 104 aa10.51□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Fn1P11276 2477 aaKnown RBP10.5□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Gm9955Q8CEJ8 102 aa10.49□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Plac8Q9JI48 112 aa10.49□□□□□ -0.73
Col17a1-201ENSMUST00000026045 FrylF8VQ05 3007 aa10.48□□□□□ -0.73
Col17a1-201ENSMUST00000026045 AW011738F6S7Q2 159 aa10.47□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Stab1Q8R4Y4 2571 aa10.46□□□□□ -0.73
Col17a1-201ENSMUST00000026045 Frem2Q6NVD0 3160 aa10.46□□□□□ -0.74
Col17a1-201ENSMUST00000026045 Anapc11Q9CPX9 84 aa10.45□□□□□ -0.74
Col17a1-201ENSMUST00000026045 Lama1P19137 3084 aa10.44□□□□□ -0.74
Col17a1-201ENSMUST00000026045 HrnrQ8VHD8 2496 aa10.41□□□□□ -0.74
Col17a1-201ENSMUST00000026045 Odf3bQ5M8M2 238 aa10.39□□□□□ -0.75
Col17a1-201ENSMUST00000026045 Celsr1O35161 3034 aa10.37□□□□□ -0.75
Col17a1-201ENSMUST00000026045 BptfA2A654 3036 aaKnown RBP10.37□□□□□ -0.75
Col17a1-201ENSMUST00000026045 Chd6A3KFM7 2711 aa10.35□□□□□ -0.75
Col17a1-201ENSMUST00000026045 Brca2P97929 3329 aa10.33□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Wdfy4E9Q2M9 3149 aa10.33□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Itpr3P70227 2670 aa10.32□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Akap13E9Q394 2776 aa10.32□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Ubr5Q80TP3 2792 aa10.31□□□□□ -0.76
Col17a1-201ENSMUST00000026045 FryE9Q8I9 3020 aa10.31□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Mast4Q811L6 2618 aa10.3□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Muc2Q80Z19 2680 aa10.28□□□□□ -0.76
Col17a1-201ENSMUST00000026045 Col6a3E9PWQ3 3284 aa10.24□□□□□ -0.77
Col17a1-201ENSMUST00000026045 Romo1P60603 79 aa10.24□□□□□ -0.77
Col17a1-201ENSMUST00000026045 Gm4491E0CX42 125 aa10.22□□□□□ -0.77
Col17a1-201ENSMUST00000026045 Gm36176A0A1W2P8D5 158 aa10.21□□□□□ -0.77
Col17a1-201ENSMUST00000026045 Gm10139O88245 57 aa10.2□□□□□ -0.78
Col17a1-201ENSMUST00000026045 Adgrg4B7ZCC9 3073 aa10.19□□□□□ -0.78
Col17a1-201ENSMUST00000026045 Kmt2bO08550 2713 aa10.17□□□□□ -0.78
Col17a1-201ENSMUST00000026045 Dmxl2Q8BPN8 3032 aa10.17□□□□□ -0.78
Col17a1-201ENSMUST00000026045 Gm9508A0A1W2P7W0 230 aa10.13□□□□□ -0.79
Col17a1-201ENSMUST00000026045 Sprr1aQ62266 144 aa10.13□□□□□ -0.79
Col17a1-201ENSMUST00000026045 NbdyA0A0N4SUI7 68 aa10.13□□□□□ -0.79
Col17a1-201ENSMUST00000026045 Gm10065F6TJM2 114 aa10.12□□□□□ -0.79
Col17a1-201ENSMUST00000026045 NbeaQ9EPN1 2936 aa10.11□□□□□ -0.79
Col17a1-201ENSMUST00000026045 Rpl37Q9D823 97 aa10.11□□□□□ -0.79
Col17a1-201ENSMUST00000026045 VcanQ62059 3357 aa10.09□□□□□ -0.79
Col17a1-201ENSMUST00000026045 Ndufaf8A2AMZ4 74 aa10.08□□□□□ -0.8
Col17a1-201ENSMUST00000026045 Gm10382Q3V0T5 144 aa10.08□□□□□ -0.8
Col17a1-201ENSMUST00000026045 Utp20Q5XG71 2788 aaKnown RBP10.08□□□□□ -0.8
Col17a1-201ENSMUST00000026045 OxtP35454 125 aa10.06□□□□□ -0.8
Col17a1-201ENSMUST00000026045 Nbeal2Q6ZQA0 2742 aa10.05□□□□□ -0.8
Col17a1-201ENSMUST00000026045 Gm17349F7BGH6 99 aa10.04□□□□□ -0.8
Col17a1-201ENSMUST00000026045 Igsf10Q3V1M1 2594 aa10.04□□□□□ -0.8
Col17a1-201ENSMUST00000026045 Wdfy3Q6VNB8 3508 aa10□□□□□ -0.81
Col17a1-201ENSMUST00000026045 Gm16253D3Z167 63 aa10□□□□□ -0.81
Col17a1-201ENSMUST00000026045 Tep1P97499 2629 aa10□□□□□ -0.81
Col17a1-201ENSMUST00000026045 DspE9Q557 2883 aaKnown RBP9.99□□□□□ -0.81
Col17a1-201ENSMUST00000026045 Dchs2A0A0A6YW72 3346 aa9.97□□□□□ -0.81
Col17a1-201ENSMUST00000026045 Col6a5A6H584 2640 aa9.96□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Gm2310J3QNJ2 377 aa9.93□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Hivep1Q03172 2688 aa9.93□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Dchs1E9PVD3 3291 aa9.93□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Zzef1Q5SSH7 2924 aa9.92□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Stab2Q8R4U0 2559 aa9.92□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Fam229aB2KGE5 128 aa9.9□□□□□ -0.82
Col17a1-201ENSMUST00000026045 Pkd1l1Q8R526 2615 aa9.9□□□□□ -0.82
Col17a1-201ENSMUST00000026045 FlncQ8VHX6 2726 aaKnown RBP9.87□□□□□ -0.83
Col17a1-201ENSMUST00000026045 Tex15F8VPN2 2785 aa9.85□□□□□ -0.83
Col17a1-201ENSMUST00000026045 Gm9112A2AI92 75 aa9.85□□□□□ -0.83
Col17a1-201ENSMUST00000026045 Myo15aQ9QZZ4 3511 aa9.85□□□□□ -0.83
Col17a1-201ENSMUST00000026045 9530053A07RikE9PVG8 2581 aa9.84□□□□□ -0.83
Col17a1-201ENSMUST00000026045 RelnQ60841 3461 aa9.83□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Krtap14O08640 167 aa9.82□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Itpr2Q9Z329 2701 aa9.81□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Trank1Q8BV79 2999 aa9.8□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Spink7Q6IE32 76 aa9.8□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Cox6b2Q80ZN9 88 aa9.8□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Igfn1Q3KNY0 2849 aa9.79□□□□□ -0.84
Col17a1-201ENSMUST00000026045 Celsr2Q9R0M0 2920 aa9.75□□□□□ -0.85
Col17a1-201ENSMUST00000026045 Krtap29-1A2A5X4 342 aa9.74□□□□□ -0.85
Col17a1-201ENSMUST00000026045 Gm9507D3Z5T3 223 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms