RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 U90926O08546 118 aa11.95□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Defa27F2Z403 93 aa11.94□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Gm17521F6QAC8 156 aa11.94□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Ube2bP63147 152 aa11.93□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Gm12353A2AGJ4 60 aa11.93□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Igkv8-19A0A0G2JFN8 121 aa11.92□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Fam104aA2A6P4 185 aa11.92□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Wfdc17Q5SSJ1 76 aa11.92□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Defb40Q70KL2 73 aa11.92□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Nsd1O88491 2588 aaKnown RBP11.92□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Gm10570F6VB42 170 aa11.92□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Dnah6E9Q0B6 4144 aa11.91□□□□□ -0.5
Shkbp1-201ENSMUST00000003857 Spink8Q09TK9 105 aa11.9□□□□□ -0.51
Shkbp1-201ENSMUST00000003857 BaalcQ8VHV1 145 aa11.9□□□□□ -0.51
Shkbp1-201ENSMUST00000003857 9530053A07RikE9PVG8 2581 aa11.89□□□□□ -0.51
Shkbp1-201ENSMUST00000003857 1700018G05RikA0A1B0GSI2 66 aa11.89□□□□□ -0.51
Shkbp1-201ENSMUST00000003857 VwfQ8CIZ8 2813 aa11.88□□□□□ -0.51
Shkbp1-201ENSMUST00000003857 Defa28D3Z1V9 94 aa11.84□□□□□ -0.51
Shkbp1-201ENSMUST00000003857 B9d2Q3UK10 175 aa11.83□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Dph3Q8K0W9 82 aa11.82□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 TgO08710 2766 aa11.81□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Gm21886J3QJU9 214 aa11.81□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Coa6Q8BGD8 79 aa11.81□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 2310061N02RikQ9D6S9 174 aa11.81□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 A530084C06RikQ3UTW2 186 aa11.81□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Gm10139O88245 57 aa11.79□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Odf3bQ5M8M2 238 aa11.79□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Zcchc13Q9D548 170 aa11.79□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Igkv3-10A0A0G2JGN0 119 aa11.78□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 AW011738F6S7Q2 159 aa11.78□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 SycnQ8VCK7 134 aa11.78□□□□□ -0.52
Shkbp1-201ENSMUST00000003857 Wfdc13Q5DQQ6 81 aa11.76□□□□□ -0.53
Shkbp1-201ENSMUST00000003857 Spint4Q9D263 159 aa11.76□□□□□ -0.53
Shkbp1-201ENSMUST00000003857 Chchd10Q7TNL9 138 aa11.73□□□□□ -0.53
Shkbp1-201ENSMUST00000003857 Gm28230A0A0A0MQ91 144 aa11.72□□□□□ -0.53
Shkbp1-201ENSMUST00000003857 Gm10337F7DEP7 55 aa11.71□□□□□ -0.53
Shkbp1-201ENSMUST00000003857 Reg3aO09037 175 aa11.71□□□□□ -0.53
Shkbp1-201ENSMUST00000003857 Csmd3Q80T79 3707 aa11.71□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Gm10837Q3UTT8 145 aa11.71□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Phf5aP83870 110 aaKnown RBP11.68□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Cdc42se1Q8BHL7 80 aa11.68□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 AI606181Q8C7B9 129 aa11.67□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Spata3Q9D9T6 193 aa11.67□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Ube2aQ9Z255 152 aa11.67□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Dync2h1Q45VK7 4306 aa11.67□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Wfdc10Q3V2J9 124 aa11.67□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Gm9508A0A1W2P7W0 230 aa11.65□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 A0A286YE49 62 aa11.65□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Atox1O08997 68 aaKnown RBP11.65□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Mrpl55Q9CZ83 127 aa11.65□□□□□ -0.54
Shkbp1-201ENSMUST00000003857 Defb12Q8K4N3 78 aa11.64□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 Defb10Q8R2I8 73 aa11.63□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 Igkv3-7A0A0G2JE31 119 aa11.63□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 Coa5Q99M07 74 aa11.62□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 HrnrQ8VHD8 2496 aa11.62□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 Rpl37aP61514 92 aa11.61□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 H2al1bA0A087WP11 105 aa11.6□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 H2al1kJ3QP08 105 aa11.6□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 H2al1eQ810S6 105 aa11.6□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 H2al1mQ9DAD9 105 aa11.6□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 Megf8P60882 2789 aa11.6□□□□□ -0.55
Shkbp1-201ENSMUST00000003857 Gm20604F8WIA3 75 aa11.58□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 1700074P13RikQ9D9G7 251 aa11.57□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Gm10197F6QEY5 67 aa11.57□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Dnah11E9Q7N9 4488 aa11.56□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Gm2310J3QNJ2 377 aa11.56□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Defb9Q8R2I6 67 aa11.56□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Tenm2Q9WTS5 2764 aa11.55□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Dnah9B1AR51 4484 aa11.54□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 6030445D17RikE9Q8F9 148 aa11.53□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Nupr2Q497P3 102 aa11.53□□□□□ -0.56
Shkbp1-201ENSMUST00000003857 Huwe1Q7TMY8 4377 aaKnown RBP11.52□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 1700012A03RikQ9DAF1 130 aa11.52□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Gm27235Q3UW50 83 aa11.51□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Igkv3-5A0A140T8M6 119 aa11.5□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Igsf10Q3V1M1 2594 aa11.5□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Muc6Q80T03 2850 aa11.49□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Stab2Q8R4U0 2559 aa11.49□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Q8K1L6 76 aa11.48□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 Gm17349F7BGH6 99 aa11.47□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 TnxbO35452 4006 aa11.47□□□□□ -0.57
Shkbp1-201ENSMUST00000003857 FasnP19096 2504 aaKnown RBP11.45□□□□□ -0.58
Shkbp1-201ENSMUST00000003857 Gm10065F6TJM2 114 aa11.44□□□□□ -0.58
Shkbp1-201ENSMUST00000003857 Gm10642Q3TWM1 71 aa11.42□□□□□ -0.58
Shkbp1-201ENSMUST00000003857 Chtf8P0CG14 533 aa11.4□□□□□ -0.58
Shkbp1-201ENSMUST00000003857 Plac8Q9JI48 112 aa11.4□□□□□ -0.58
Shkbp1-201ENSMUST00000003857 Fras1Q80T14 4010 aa11.39□□□□□ -0.59
Shkbp1-201ENSMUST00000003857 Krtap29-1A2A5X4 342 aa11.38□□□□□ -0.59
Shkbp1-201ENSMUST00000003857 Bean1Q9EQG5 255 aa11.38□□□□□ -0.59
Shkbp1-201ENSMUST00000003857 Gm4707V9GXN5 68 aa11.37□□□□□ -0.59
Shkbp1-201ENSMUST00000003857 Gm10267M0QWD8 85 aa11.36□□□□□ -0.59
Shkbp1-201ENSMUST00000003857 Phxr4P15974 95 aa11.33□□□□□ -0.6
Shkbp1-201ENSMUST00000003857 PlecQ9QXS1 4691 aaKnown RBP11.3□□□□□ -0.6
Shkbp1-201ENSMUST00000003857 PrkdcP97313 4128 aa11.27□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Cypt14J3QPF7 87 aa11.26□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 NbdyA0A0N4SUI7 68 aa11.25□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Igkv3-3A0A140T8Q0 119 aa11.25□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Gm10160F6Y577 67 aa11.25□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Znf706Q9D115 76 aaKnown RBP11.24□□□□□ -0.61
Shkbp1-201ENSMUST00000003857 Gm9507D3Z5T3 223 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms