RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Igkv3-9A0A140T8P4 119 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Esp38A8R0X1 80 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 PscaP57096 123 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Psmg3Q9CZH3 122 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Q9DAA7 145 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Smco4Q9JIS3 59 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Snai3Q9QY31 287 aa4.04□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Tcrg-C1A0A075B5Z0 172 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Umad1E0CX23 159 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Phxr4P15974 95 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Defa16P50714 93 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Atp5eP56382 52 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Arl14eplQ3UKZ7 152 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Cox7a2lQ61387 111 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Sec11cQ9D8V7 192 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Dnah2P0C6F1 4456 aa4.03□□□□□ -1.76
Ccdc54-201ENSMUST00000062439 Olfr1116E9PXB8 307 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm10203F6QJ09 66 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 OdaphJ3QNT8 126 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Defa4P28311 92 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Phf5aP83870 110 aaKnown RBP4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Sdhaf1Q3U276 118 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 CenpwQ3URR0 86 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Polr2kQ63871 58 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Wfdc21Q8BTE6 63 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 EnhoQ8K1D8 76 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Tex48Q9DA81 110 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm26920S4R2A5 56 aa4.02□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Ighv13-2A0A0A6YWN3 119 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm10271F6WY25 52 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Nat8f4G5E8L3 226 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Esp3J3QN49 87 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Rmi2Q3UPE3 149 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 D130052B06RikQ3UW13 202 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Ndufa4Q62425 82 aaKnown RBP4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Q8CF25 301 aa4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Ssbp1Q9CYR0 152 aaKnown RBP4.01□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Trav14-3A0A075B607 120 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Zfp951A0A087WRH0 451 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Lamtor3O88653 124 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 P01791 123 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Defa15P50713 93 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Hist1h4aP62806 103 aaKnown RBP4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Ube2bP63147 152 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Eif4ebp1Q60876 117 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Defb40Q70KL2 73 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Q8BGJ3 129 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Q9CRC3 126 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Cst10Q9JM84 148 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Dnah5Q8VHE6 4621 aa4□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm28044L7N1X0 119 aa3.99□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Prh1P05142 261 aa3.99□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Defa1P11477 93 aa3.99□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 PdpnQ62011 172 aa3.99□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Pxt1Q8K459 51 aa3.99□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Dnah11E9Q7N9 4488 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm42420A0A0J9YUQ2 99 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm45785A0A1B0GT05 94 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm45717A0A1B0GT68 152 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Vsig4F6TUL9 280 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Krtap13O88375 197 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Pglyrp4Q0VB07 374 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 MymxQ2Q5T5 84 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 ManbalQ9D8X0 85 aa3.98□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Gm11568A2A4M2 211 aa3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Tmem213Q08EA8 116 aa3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Trappc1Q5NCF2 145 aa3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Cfap126Q6P8X9 189 aa3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 SvbpQ99LQ4 66 aa3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 4930556J24RikQ9D4U7 146 aa3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Dync1h1Q9JHU4 4644 aaKnown RBP3.97□□□□□ -1.77
Ccdc54-201ENSMUST00000062439 Stard9Q80TF6 4561 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 SacsQ9JLC8 4582 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav7-6A0A075B640 112 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Fam19a3Q7TPG6 132 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Cdc42se2Q8BGH7 84 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Ifitm1Q9D103 106 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 MobpQ9D2P8 170 aa3.96□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Igkv8-30A0A140T8M3 121 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Grcc10O35127 126 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Prp2P05143 317 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 CnbpP53996 178 aaKnown RBP3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Rpl39P62892 51 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Q5BN45 167 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Hist3h2bbQ8CGP0 126 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Tmem223Q9CQE2 199 aaKnown RBP3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Hist3h2baQ9D2U9 126 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 MNCb-2875Q9DCB3 74 aa3.95□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Fat1A0A1L1SQU7 4645 aa3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav14d-3-dv8A0A075B619 120 aa3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav14n-2A0A0G2JDF5 121 aa3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Ndufa1O35683 70 aa3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Smim7Q5RKS2 75 aa3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Ndufa12Q7TMF3 145 aaKnown RBP3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Fam25cQ8CF02 89 aa3.94□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav9n-4A0A075B631 113 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Trav14-2A0A075B694 121 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Rpl36-ps4A0A140T8U4 117 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 Zfp930A0A1D5RM15 441 aa3.93□□□□□ -1.78
Ccdc54-201ENSMUST00000062439 FcorP0DJI6 106 aa3.93□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 78.5 ms