RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Gm5142Q8C5X9 133 aa12.91□□□□□ -0.34
Pkp4-210ENSMUST00000168631 Unc80Q8BLN6 3261 aa12.91□□□□□ -0.34
Pkp4-210ENSMUST00000168631 4930524J08RikQ9CUJ5 163 aa12.91□□□□□ -0.34
Pkp4-210ENSMUST00000168631 Nsd1O88491 2588 aaKnown RBP12.9□□□□□ -0.34
Pkp4-210ENSMUST00000168631 Gm11011D3Z3L9 86 aa12.9□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Tcl1b5P56845 121 aa12.9□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Col27a1Q5QNQ9 1845 aa12.89□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Igkv8-21A0A140T8P7 120 aa12.89□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Defb10Q8R2I8 73 aa12.89□□□□□ -0.35
Pkp4-210ENSMUST00000168631 NipblQ6KCD5 2798 aaKnown RBP12.88□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Crip3Q6Q6R3 243 aa12.88□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Trav14-1A0A0G2JF94 121 aa12.88□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Spink13Q3UTS8 97 aa12.88□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Ndufc1Q9CQY9 76 aa12.88□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Dmxl1Q6PNC0 3013 aa12.86□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Gm10135F6TEE5 83 aa12.86□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Ly6g6cQ9Z1Q4 126 aa12.86□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Ighv2-9A0A075B5Q5 116 aa12.85□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Ccdc179J3QM76 67 aa12.85□□□□□ -0.35
Pkp4-210ENSMUST00000168631 4930556J24RikQ9D4U7 146 aa12.85□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Crip2Q9DCT8 208 aaKnown RBP12.85□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Gm10845Q3UNY9 185 aa12.84□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Rev3lQ61493 3122 aa12.84□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Defb38Q7TNV7 63 aa12.84□□□□□ -0.35
Pkp4-210ENSMUST00000168631 Gm16485Q8C4B7 115 aa12.83□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Znf580Q9DB38 172 aa12.83□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Rpl28P41105 137 aaKnown RBP12.82□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Serp2Q6TAW2 65 aa12.82□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Srsf12Q8C8K3 266 aa12.82□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Ifitm6A0A1B0GS75 124 aa12.8□□□□□ -0.36
Pkp4-210ENSMUST00000168631 KalrnA2CG49 2964 aa12.8□□□□□ -0.36
Pkp4-210ENSMUST00000168631 BC025920Q3US60 128 aa12.8□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Bod1lE9Q6J5 3032 aa12.79□□□□□ -0.36
Pkp4-210ENSMUST00000168631 AspmQ8CJ27 3122 aa12.79□□□□□ -0.36
Pkp4-210ENSMUST00000168631 CenpwQ3URR0 86 aa12.79□□□□□ -0.36
Pkp4-210ENSMUST00000168631 TeppQ6IMH0 216 aa12.78□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Tep1P97499 2629 aa12.78□□□□□ -0.36
Pkp4-210ENSMUST00000168631 3110070M22RikQ9DAQ7 118 aa12.78□□□□□ -0.36
Pkp4-210ENSMUST00000168631 Odf3l2Q3TZ65 277 aa12.77□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Igkv3-12A0A140T8P0 119 aa12.77□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Vpreb1P13372 142 aa12.77□□□□□ -0.37
Pkp4-210ENSMUST00000168631 SptssbQ925E8 76 aa12.76□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Col4a2P08122 1707 aa12.76□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Q8K1L6 76 aa12.76□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Zfand2aQ9JII7 171 aa12.76□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Atox1O08997 68 aaKnown RBP12.75□□□□□ -0.37
Pkp4-210ENSMUST00000168631 MgaA2AWL7 3003 aaKnown RBP12.75□□□□□ -0.37
Pkp4-210ENSMUST00000168631 1600014C23RikQ9DAX4 101 aa12.74□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Wfdc3Q14AE4 130 aa12.74□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Ndufs5Q99LY9 106 aa12.74□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Ighv8-13A0A075B5Y0 101 aa12.74□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Psmb11Q8BG41 302 aa12.73□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Gm10267M0QWD8 85 aa12.72□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Gm10549Q3URY4 149 aa12.72□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Itpr3P70227 2670 aa12.72□□□□□ -0.37
Pkp4-210ENSMUST00000168631 Ranbp2Q9ERU9 3053 aaKnown RBP12.71□□□□□ -0.37
Pkp4-210ENSMUST00000168631 SvipQ3UZP4 77 aa12.7□□□□□ -0.38
Pkp4-210ENSMUST00000168631 NpwA0A1L1STR8 176 aa12.69□□□□□ -0.38
Pkp4-210ENSMUST00000168631 A830031A19RikQ8BNT5 113 aa12.69□□□□□ -0.38
Pkp4-210ENSMUST00000168631 A0A286YE49 62 aa12.69□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Pkd1l1Q8R526 2615 aa12.69□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Igsf10Q3V1M1 2594 aa12.69□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Gm5153P01627 120 aa12.69□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Col6a5A6H584 2640 aa12.68□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Adm2Q7TNK8 150 aa12.68□□□□□ -0.38
Pkp4-210ENSMUST00000168631 H2al1bA0A087WP11 105 aa12.67□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Gm20604F8WIA3 75 aa12.67□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Gm17509Q9CZ61 145 aa12.66□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Sprr2jO70561 109 aa12.66□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Defb37Q7TMD2 62 aa12.66□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Cd164Q9R0L9 197 aa12.66□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Frem2Q6NVD0 3160 aa12.65□□□□□ -0.38
Pkp4-210ENSMUST00000168631 Krtap24-1G3X9A2 248 aa12.64□□□□□ -0.39
Pkp4-210ENSMUST00000168631 C130032M10RikQ8C888 123 aa12.64□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Sec61gP60060 68 aa12.63□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Igkv8-30A0A140T8M3 121 aa12.62□□□□□ -0.39
Pkp4-210ENSMUST00000168631 CrygaP04345 174 aa12.62□□□□□ -0.39
Pkp4-210ENSMUST00000168631 9530053A07RikE9PVG8 2581 aa12.61□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Znf706Q9D115 76 aaKnown RBP12.6□□□□□ -0.39
Pkp4-210ENSMUST00000168631 1700074P13RikQ9D9G7 251 aa12.6□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Q9DAA7 145 aa12.6□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Col5a1O88207 1838 aa12.6□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Nbeal2Q6ZQA0 2742 aa12.59□□□□□ -0.39
Pkp4-210ENSMUST00000168631 P84750 121 aa12.59□□□□□ -0.39
Pkp4-210ENSMUST00000168631 A730009L09RikA0A1B0GS82 72 aa12.58□□□□□ -0.39
Pkp4-210ENSMUST00000168631 Sostdc1Q9CQN4 206 aa12.58□□□□□ -0.39
Pkp4-210ENSMUST00000168631 MobpQ9D2P8 170 aa12.58□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Gm9887F6RFI0 207 aa12.57□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Defb39Q70KL3 74 aa12.54□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Dmbt1Q60997 2085 aa12.54□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Wfdc17Q5SSJ1 76 aa12.54□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Cdip1Q9DB75 208 aa12.54□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Muc2Q80Z19 2680 aa12.54□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Stab2Q8R4U0 2559 aa12.53□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Gm16181B0V2H2 73 aa12.53□□□□□ -0.4
Pkp4-210ENSMUST00000168631 Defb45Q3V490 66 aa12.52□□□□□ -0.41
Pkp4-210ENSMUST00000168631 H2al1aQ5M8Q2 105 aa12.51□□□□□ -0.41
Pkp4-210ENSMUST00000168631 H2al1eQ810S6 105 aa12.51□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Gm9195A0A140LHT4 2805 aa12.5□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Gm43218A0A0G2JGT0 114 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 87.5 ms