RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Abca2P41234 2434 aa6.7□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Gm10135F6TEE5 83 aa6.7□□□□□ -1.34
Col6a5-201ENSMUST00000165165 P01819 144 aa6.7□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Flg2Q2VIS4 2362 aa6.7□□□□□ -1.34
Col6a5-201ENSMUST00000165165 4930507D05RikQ8C9C9 103 aa6.7□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Rif1Q6PR54 2419 aaKnown RBP6.69□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Ighv8-13A0A075B5Y0 101 aa6.69□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Q9DAA7 145 aa6.69□□□□□ -1.34
Col6a5-201ENSMUST00000165165 CnfnQ6PCW6 111 aa6.68□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Q8BGJ3 129 aa6.68□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Col4a4Q9QZR9 1682 aa6.67□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Gm10549Q3URY4 149 aa6.67□□□□□ -1.34
Col6a5-201ENSMUST00000165165 D730001G18RikA0A087WQU7 115 aa6.67□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Spg11Q3UHA3 2430 aa6.67□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Phxr5P08399 672 aa6.66□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Gm9922Q8C3P1 144 aa6.66□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Dmbt1Q60997 2085 aa6.66□□□□□ -1.34
Col6a5-201ENSMUST00000165165 Rps28P62858 69 aaKnown RBP6.65□□□□□ -1.34
Col6a5-201ENSMUST00000165165 1700056E22RikF7CNM6 234 aa6.65□□□□□ -1.35
Col6a5-201ENSMUST00000165165 OtoglF7A4A7 2325 aa6.65□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Igf2rQ07113 2483 aaKnown RBP6.64□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Fam19a3Q7TPG6 132 aa6.64□□□□□ -1.35
Col6a5-201ENSMUST00000165165 1700018G05RikA0A1B0GSI2 66 aa6.64□□□□□ -1.35
Col6a5-201ENSMUST00000165165 2310034G01RikA0A286YDL3 209 aa6.64□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Wisp2Q9Z0G4 251 aa6.63□□□□□ -1.35
Col6a5-201ENSMUST00000165165 AI606181Q8C7B9 129 aa6.63□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Spink13Q3UTS8 97 aa6.63□□□□□ -1.35
Col6a5-201ENSMUST00000165165 CrygaP04345 174 aa6.62□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Gm10642Q3TWM1 71 aa6.62□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Cdc42se1Q8BHL7 80 aa6.62□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Krtap27-1E9PX37 202 aa6.62□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Cdip1Q9DB75 208 aa6.62□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Gm9925F6T2U3 160 aa6.61□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Odf3l2Q3TZ65 277 aa6.61□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Ncor1Q60974 2453 aa6.61□□□□□ -1.35
Col6a5-201ENSMUST00000165165 B230217C12RikE9Q3Z1 139 aa6.6□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Col27a1Q5QNQ9 1845 aa6.6□□□□□ -1.35
Col6a5-201ENSMUST00000165165 7530416G11RikJ3QJX6 159 aa6.59□□□□□ -1.35
Col6a5-201ENSMUST00000165165 Gm21886J3QJU9 214 aa6.58□□□□□ -1.36
Col6a5-201ENSMUST00000165165 A930009A15RikG3UYI6 118 aa6.58□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Gm26661M0QWV4 156 aa6.57□□□□□ -1.36
Col6a5-201ENSMUST00000165165 CriptO70333 101 aa6.57□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Pla2g2eQ9QUL3 142 aa6.57□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Rtl10D3YWW5 146 aa6.57□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Cd164l2Q9D6W7 172 aa6.57□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Gm9903Q8C9Y8 129 aa6.57□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Gm9767G3X930 207 aa6.56□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Dmac1Q9CQ00 111 aa6.56□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Gm44790A0A0N4SV91 103 aa6.56□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Bri3P28662 125 aa6.55□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Rpl37aP61514 92 aa6.55□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Krtap16-1A2A5X5 502 aa6.55□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Znf580Q9DB38 172 aa6.55□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Ighv2-2A0A075B5P8 116 aa6.54□□□□□ -1.36
Col6a5-201ENSMUST00000165165 P01821 116 aa6.54□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Gm10300Q8C8P7 189 aa6.54□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Defb10Q8R2I8 73 aa6.53□□□□□ -1.36
Col6a5-201ENSMUST00000165165 Smr3aQ61900 147 aa6.52□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Coa5Q99M07 74 aa6.52□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Gm3443F7CCV5 94 aa6.52□□□□□ -1.37
Col6a5-201ENSMUST00000165165 AvpP35455 168 aa6.52□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Gm27235Q3UW50 83 aa6.52□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Spaca4Q80ZQ0 127 aa6.52□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Gpr15lA0A0B4J1N3 78 aa6.5□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Gm11627A6PWP4 55 aa6.49□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Elof1P60003 83 aa6.49□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Hivep2Q3UHF7 2430 aa6.48□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Znf575Q3TXZ1 239 aa6.48□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Uqcr11Q9CPX8 56 aa6.48□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Phf5aP83870 110 aaKnown RBP6.48□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Gm10643Q3URG9 111 aa6.47□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Gm10770F7D043 238 aa6.47□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Lce6aD3YV94 81 aa6.47□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Pla2g2cP48076 150 aa6.46□□□□□ -1.37
Col6a5-201ENSMUST00000165165 Defb2P82020 71 aa6.46□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Gm5464Q3UY29 175 aa6.45□□□□□ -1.38
Col6a5-201ENSMUST00000165165 B430305J03RikQ8BQQ8 176 aa6.45□□□□□ -1.38
Col6a5-201ENSMUST00000165165 AI854703Q8BIN3 203 aa6.44□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Gm10308Q9CVR5 141 aa6.43□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Crip3Q6Q6R3 243 aa6.42□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Prr13Q9CQJ5 137 aa6.42□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Gm17689B3GLJ4 109 aa6.42□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Q9DAB9 146 aa6.41□□□□□ -1.38
Col6a5-201ENSMUST00000165165 Phxr4P15974 95 aa6.4□□□□□ -1.38
Col6a5-201ENSMUST00000165165 3110070M22RikQ9DAQ7 118 aa6.39□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Zfp462B1AWL2 2495 aaKnown RBP6.38□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Q8BT88 171 aa6.37□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Gm5617Q91VN2 117 aa6.37□□□□□ -1.39
Col6a5-201ENSMUST00000165165 E130208F15RikQ3UPV3 143 aa6.36□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Gm16181B0V2H2 73 aa6.36□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Snhg11Q4G0K9 87 aa6.36□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Srsf12Q8C8K3 266 aa6.35□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Defb11Q8R2I7 77 aa6.35□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Prr9Q8BV84 116 aa6.35□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Gm9573F7C950 1606 aa6.34□□□□□ -1.39
Col6a5-201ENSMUST00000165165 Fam168bQ80XQ8 194 aa6.33□□□□□ -1.4
Col6a5-201ENSMUST00000165165 PolqQ8CGS6 2544 aa6.32□□□□□ -1.4
Col6a5-201ENSMUST00000165165 MobpQ9D2P8 170 aa6.32□□□□□ -1.4
Col6a5-201ENSMUST00000165165 Ptpn13Q64512 2453 aa6.3□□□□□ -1.4
Col6a5-201ENSMUST00000165165 Spink7Q6IE32 76 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 182.2 ms