RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Csdc2Q91YQ3 154 aa10.89□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 CrygaP04345 174 aa10.88□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Coa6Q8BGD8 79 aa10.88□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Sptbn4E9PX29 2561 aa10.88□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Gm9887F6RFI0 207 aa10.87□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Gm10300Q8C8P7 189 aa10.87□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 SnurfQ9WU12 71 aa10.87□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Chd8Q09XV5 2582 aaKnown RBP10.86□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Cd164Q9R0L9 197 aa10.86□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Col5a1O88207 1838 aa10.86□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Ighv2-2A0A075B5P8 116 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Gm28230A0A0A0MQ91 144 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Gm10570F6VB42 170 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 P01821 116 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Chchd10Q7TNL9 138 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 MobpQ9D2P8 170 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Usp9xP70398 2559 aaKnown RBP10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 4930518I15RikQ3V2W7 57 aa10.85□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Nav3Q80TN7 2359 aa10.84□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Adm2Q7TNK8 150 aa10.84□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Hivep3A2A884 2348 aa10.84□□□□□ -0.67
Pcdha9-201ENSMUST00000115659 Igkv3-7A0A0G2JE31 119 aa10.83□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Defb38Q7TNV7 63 aa10.83□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Gm26661M0QWV4 156 aa10.82□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Col4a2P08122 1707 aa10.82□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Cox6a2P43023 97 aa10.82□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Defb10Q8R2I8 73 aa10.82□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Psors1c2Q80ZC9 134 aa10.82□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Wfdc6bF6ULY1 148 aa10.81□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Krtap26-1Q9D7N2 215 aa10.81□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Gm9903Q8C9Y8 129 aa10.81□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Gm3285A0A1W2P7U0 201 aa10.8□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Rps28P62858 69 aaKnown RBP10.79□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Gm11627A6PWP4 55 aa10.78□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Mrpl34Q99N91 92 aa10.78□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Sostdc1Q9CQN4 206 aa10.78□□□□□ -0.68
Pcdha9-201ENSMUST00000115659 Gm16181B0V2H2 73 aa10.77□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Msrb1Q9JLC3 116 aa10.77□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Ptpn13Q64512 2453 aa10.76□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 A730009L09RikA0A1B0GS82 72 aa10.76□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Fam19a3Q7TPG6 132 aa10.76□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Ly6g6cQ9Z1Q4 126 aa10.76□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Reg3aO09037 175 aa10.75□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Krtap16-1A2A5X5 502 aa10.75□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Wfdc3Q14AE4 130 aa10.75□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Spint4Q9D263 159 aa10.75□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Elof1P60003 83 aa10.73□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 1600014C23RikQ9DAX4 101 aa10.73□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 6430550D23RikE9Q1X6 194 aa10.73□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Dmac1Q9CQ00 111 aa10.72□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Wfdc17Q5SSJ1 76 aa10.72□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Gm10197F6QEY5 67 aa10.72□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Igkv8-19A0A0G2JFN8 121 aa10.71□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Igkv8-27A0A0G2JF28 120 aa10.71□□□□□ -0.69
Pcdha9-201ENSMUST00000115659 Gm28374F6SG70 93 aa10.7□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 E130208F15RikQ3UPV3 143 aa10.7□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 Gm10160F6Y577 67 aa10.7□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 Defb37Q7TMD2 62 aa10.69□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 SetxA2AKX3 2646 aa10.68□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 4930519P11RikQ9CUJ8 166 aa10.67□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 Gm21886J3QJU9 214 aa10.67□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 AI854703Q8BIN3 203 aa10.66□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 1700018G05RikA0A1B0GSI2 66 aa10.65□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 Bean1Q9EQG5 255 aa10.65□□□□□ -0.7
Pcdha9-201ENSMUST00000115659 2310034G01RikA0A286YDL3 209 aa10.64□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Gm10308Q9CVR5 141 aa10.64□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 PtprqP0C5E4 2300 aa10.63□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Limd2Q8BGB5 128 aa10.62□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Gm10772F7AIG4 85 aa10.61□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Defb39Q70KL3 74 aa10.6□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 PolqQ8CGS6 2544 aa10.6□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Prol1E9PYQ4 312 aa10.59□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 TrrapQ80YV3 2565 aaKnown RBP10.59□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Gm44790A0A0N4SV91 103 aa10.59□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 A530084C06RikQ3UTW2 186 aa10.59□□□□□ -0.71
Pcdha9-201ENSMUST00000115659 Gm10837Q3UTT8 145 aa10.58□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Krtap24-1G3X9A2 248 aa10.57□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Snhg11Q4G0K9 87 aa10.57□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Setd2E9Q5F9 2537 aa10.56□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Gm10770F7D043 238 aa10.56□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Gm10642Q3TWM1 71 aa10.55□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Hcfc1Q61191 2045 aaKnown RBP10.53□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 SrcapA0A087WQ44 3271 aa10.52□□□□□ -0.72
Pcdha9-201ENSMUST00000115659 Gm17606F6ZL36 78 aa10.52□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 Znf414Q9DCK4 299 aa10.51□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 Zfp462B1AWL2 2495 aaKnown RBP10.5□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 7530416G11RikJ3QJX6 159 aa10.5□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 MtorQ9JLN9 2549 aa10.49□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 AI606181Q8C7B9 129 aa10.48□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 Prr13Q9CQJ5 137 aa10.47□□□□□ -0.73
Pcdha9-201ENSMUST00000115659 Cdc42se1Q8BHL7 80 aa10.45□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Phf5aP83870 110 aaKnown RBP10.45□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Gm27235Q3UW50 83 aa10.44□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Defb50Q6TU36 73 aa10.44□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 A930002H24RikQ8C8Y3 163 aa10.44□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Sprr1bQ62267 153 aa10.43□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Gm17689B3GLJ4 109 aa10.43□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Gm10999F6Q4M4 69 aa10.43□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 4930507D05RikQ8C9C9 103 aa10.43□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Bahcc1Q3UHR0 2643 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms